/*************************************************************************** * Program: blast.js * Author: Joe Reynoldson * Date: 12/1/05 * Description: This program contains the onload functionality of the blast.cgi * form which sets up the state and callbacks of the type ahead organism search * elements. It also provides functions for showing/hiding elements. * ************************************************************************/ var labels = new Array; labels["toggleAdvancedParams"] = new Array; labels["toggleAdvancedParams"]["block"] = "Hide Advanced Parameters"; labels["toggleAdvancedParams"]["none"] = "Display Advanced Parameters"; // define a method which fires when the page is fully loaded window.onload=function(){ var clrBtn; // button object to clear type-ahead var toggleBtn; // button object toggle advanced options var targetDiv; // div containing advanced options var resultDiv; // div containing organisms which matched a query delAllRows('blast_db'); if(document.getElementById){ clrBtn = document.getElementById("clearBtn"); toggleBtn = document.getElementById("toggleAdvancedParams"); targetDiv = document.getElementById("toggleAdvancedParamsTarget"); resultDiv = document.getElementById("result_list"); } else if(document.all){ clrBtn = document.all['clearBtn']; toggleBtn = document.all['toggleAdvancedParams']; advancedDiv = document.all['AdvancedParameters']; resultDiv = document.all['result_list']; } // assign clear button callback clrBtn.onclick = clearSearch; // assign toggle button callback and initialize if (toggleBtn != null) { toggleBtn.onclick = toggleObj; toggleBtn.innerHTML = labels["toggleAdvancedParams"]["none"]; targetDiv.style.display = "none"; } // initialize advanced parameters as none resultDiv.style.display = "none"; addSpeciesRow(); } // toggleDisplay will toggle the display of an object function toggleDisplay(tObj){ var display = "none"; if (tObj.style.display == "none"){ display = "block"; } tObj.style.display = display; return display; } /* toggleObj is a button callback which toggles the display of an object * associated with a button, and toggles the content of the button based on * the target object's display */ function toggleObj(){ var btnId = this.id; var targetObj; var toggleBtn; if(document.getElementById){ toggleBtn = document.getElementById(btnId); targetObj = document.getElementById(toggleBtn.id + "Target"); } else if(document.all){ toggleBtn = document.all[btnId]; targetObj = document.all[toggleBtn.value]; } var displayState = toggleDisplay(targetObj); toggleBtn.innerHTML = labels[btnId][displayState]; return false; } function IDhelp() { var generator=window.open('','name','height=300,width=600'); generator.document.write('Sequence IDs as BLAST inputs'); generator.document.write(''); generator.document.write('

For sequence IDs, you can use gi# (e.g., 63082055), or acc# (e.g., DN949669) or contig ID (e.g., ZmGSStuc04-27-04.0.1).

For multiple IDs, each ID should in one line as shown in the example below:

63082055
DN949669
ZmGSStuc04-27-04.0.1
'); generator.document.write('

Close this window

'); generator.document.write(''); generator.document.close(); }