Barley1_01637
Probe Details
- Follow the link in the "Probe Set" column to access detailed annotation at PLEXdb (http://www.plexdb.org)
- Follow the link in the "Other Matches" column to access contig assembly information
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| Probe Set | Probe | Orientation | Matching Position (from - to) |
Probe Sequence | Other Matches (Sequence Length) |
|---|---|---|---|---|---|
| Contig1637_at | Contig1637_at_662 | + | 650 - 674 | TCGCGTACCGTGACAACCCCGGGAG | PUT-161a-Hordeum_vulgare-95800_(682) PUT-161a-Hordeum_vulgare-72923_(1142) PUT-161a-Hordeum_vulgare-653109807_(1269) PUT-161a-Hordeum_vulgare-63503_(645) PUT-157a-Hordeum_vulgare-73263_(1142) PUT-157a-Hordeum_vulgare-719111101_(1269) PUT-157a-Hordeum_vulgare-68322_(645) PUT-157a-Hordeum_vulgare-102363_(682) PUT-155a-Hordeum_vulgare-786110927_(1269) PUT-155a-Hordeum_vulgare-59838_(645) PUT-155a-Hordeum_vulgare-48463_(1142) PUT-155a-Hordeum_vulgare-12544_(682) PUT-154a-Hordeum_vulgare-779110920_(1269) PUT-154a-Hordeum_vulgare-63187_(645) PUT-154a-Hordeum_vulgare-54018_(1142) PUT-154a-Hordeum_vulgare-10456_(682) PUT-151a-Hordeum_vulgare-70636_(682) PUT-151a-Hordeum_vulgare-64212_(645) PUT-151a-Hordeum_vulgare-47863_(1142) PUT-151a-Hordeum_vulgare-1355106204_(1269) Barley1_01637_(1244) |
| Contig1637_at_666 | + | 654 - 678 | GTACCGTGACAACCCCGGGAGCATC | ||
| Contig1637_at_673 | + | 661 - 685 | GACAACCCCGGGAGCATCAGCCTGA | ||
| Contig1637_at_676 | + | 664 - 688 | AACCCCGGGAGCATCAGCCTGAACT | ||
| Contig1637_at_682 | + | 670 - 694 | GGGAGCATCAGCCTGAACTACGCGA | ||
| Contig1637_at_685 | + | 673 - 697 | AGCATCAGCCTGAACTACGCGACGT | ||
| Contig1637_at_686 | + | 674 - 698 | GCATCAGCCTGAACTACGCGACGTT | ||
| Contig1637_at_687 | + | 675 - 699 | CATCAGCCTGAACTACGCGACGTTC | ||
| Contig1637_at_716 | + | 704 - 728 | CGGGCACCACCGTGCGTGACCAGAA | ||
| Contig1637_at_727 | + | 715 - 739 | GTGCGTGACCAGAACAACGGGCTGA | ||
| Contig1637_at_729 | + | 717 - 741 | GCGTGACCAGAACAACGGGCTGACC | ||
| HVSMEm0003C15r2_s_at | HVSMEm0003C15r2_s_at_135 | + | 870 - 894 | CGGCAATGCGCGGACGTACAACCAG | PUT-161a-Hordeum_vulgare-95799_(552) PUT-161a-Hordeum_vulgare-95798_(350) PUT-161a-Hordeum_vulgare-653109807_(1269) PUT-161a-Hordeum_vulgare-48739_(605) PUT-157a-Hordeum_vulgare-96502_(552) PUT-157a-Hordeum_vulgare-719111101_(1269) PUT-157a-Hordeum_vulgare-55016_(605) PUT-157a-Hordeum_vulgare-102362_(350) PUT-155a-Hordeum_vulgare-94038_(552) PUT-155a-Hordeum_vulgare-786110927_(1269) PUT-155a-Hordeum_vulgare-70154_(605) PUT-155a-Hordeum_vulgare-12543_(350) PUT-154a-Hordeum_vulgare-92605_(552) PUT-154a-Hordeum_vulgare-779110920_(1269) PUT-154a-Hordeum_vulgare-45576_(605) PUT-154a-Hordeum_vulgare-10455_(350) PUT-151a-Hordeum_vulgare-89270_(552) PUT-151a-Hordeum_vulgare-85428_(350) PUT-151a-Hordeum_vulgare-70434_(605) PUT-151a-Hordeum_vulgare-1355106204_(1269) Barley1_45386_(402) Barley1_01637_(1244) |
| HVSMEm0003C15r2_s_at_136 | + | 871 - 895 | GGCAATGCGCGGACGTACAACCAGG | ||
| HVSMEm0003C15r2_s_at_328 | + | 1063 - 1087 | GTGTAGCTACCTAGCTCACATACCT | ||
| HVSMEm0003C15r2_s_at_329 | + | 1064 - 1088 | TGTAGCTACCTAGCTCACATACCTA | ||
| HVSMEm0003C15r2_s_at_330 | + | 1065 - 1089 | GTAGCTACCTAGCTCACATACCTAA | ||
| HVSMEm0003C15r2_s_at_331 | + | 1066 - 1090 | TAGCTACCTAGCTCACATACCTAAA | ||
| HVSMEm0003C15r2_s_at_332 | + | 1067 - 1091 | AGCTACCTAGCTCACATACCTAAAT | ||
| HVSMEm0003C15r2_s_at_333 | + | 1068 - 1092 | GCTACCTAGCTCACATACCTAAATA | ||
| HVSMEm0003C15r2_s_at_336 | + | 1071 - 1095 | ACCTAGCTCACATACCTAAATAAAT | ||
| HVSMEm0003C15r2_s_at_349 | + | 1084 - 1108 | ACCTAAATAAATAAGCTGCACGTAC | ||
| HVSMEm0003C15r2_s_at_355 | + | 1090 - 1114 | ATAAATAAGCTGCACGTACGTACGT | ||
| Contig1637_s_at | Contig1637_s_at_1012 | + | 1000 - 1024 | GAGAGGAGCTTCGGGCTCTTCAACC | PUT-161a-Hordeum_vulgare-95799_(552) PUT-161a-Hordeum_vulgare-95798_(350) PUT-161a-Hordeum_vulgare-658109806_(878) PUT-161a-Hordeum_vulgare-653109807_(1269) PUT-161a-Hordeum_vulgare-48739_(605) PUT-157a-Hordeum_vulgare-96502_(552) PUT-157a-Hordeum_vulgare-722111109_(878) PUT-157a-Hordeum_vulgare-719111101_(1269) PUT-157a-Hordeum_vulgare-55016_(605) PUT-157a-Hordeum_vulgare-102362_(350) PUT-155a-Hordeum_vulgare-94038_(552) PUT-155a-Hordeum_vulgare-789110927_(878) PUT-155a-Hordeum_vulgare-786110927_(1269) PUT-155a-Hordeum_vulgare-70154_(605) PUT-155a-Hordeum_vulgare-12543_(350) PUT-154a-Hordeum_vulgare-92605_(552) PUT-154a-Hordeum_vulgare-783110929_(878) PUT-154a-Hordeum_vulgare-779110920_(1269) PUT-154a-Hordeum_vulgare-45576_(605) PUT-154a-Hordeum_vulgare-10455_(350) PUT-151a-Hordeum_vulgare-89270_(552) PUT-151a-Hordeum_vulgare-85428_(350) PUT-151a-Hordeum_vulgare-70434_(605) PUT-151a-Hordeum_vulgare-1356106199_(878) PUT-151a-Hordeum_vulgare-1355106204_(1269) Barley1_01637_(1244) |
| Contig1637_s_at_1125 | + | 1113 - 1137 | GTAATGCGGCATCCAAGTGTAACGT | ||
| Contig1637_s_at_1130 | + | 1118 - 1142 | GCGGCATCCAAGTGTAACGTAGACA | ||
| Contig1637_s_at_1145 | + | 1133 - 1157 | AACGTAGACACGTACATTCATCCAT | ||
| Contig1637_s_at_1150 | + | 1138 - 1162 | AGACACGTACATTCATCCATGGAAG | ||
| Contig1637_s_at_1160 | + | 1148 - 1172 | ATTCATCCATGGAAGAGTGCAACCA | ||
| Contig1637_s_at_1174 | + | 1162 - 1186 | GAGTGCAACCAAGCATGCGTTAACT | ||
| Contig1637_s_at_1180 | + | 1168 - 1192 | AACCAAGCATGCGTTAACTTCCTGG | ||
| Contig1637_s_at_1186 | + | 1174 - 1198 | GCATGCGTTAACTTCCTGGTGATGA | ||
| Contig1637_s_at_1190 | + | 1178 - 1202 | GCGTTAACTTCCTGGTGATGATACA | ||
| Contig1637_s_at_1194 | + | 1182 - 1206 | TAACTTCCTGGTGATGATACATCAT |