Barley1_00072
Probe Details
- Follow the link in the "Probe Set" column to access detailed annotation at PLEXdb (http://www.plexdb.org)
- Follow the link in the "Other Matches" column to access contig assembly information
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| Probe Set | Probe | Orientation | Matching Position (from - to) |
Probe Sequence | Other Matches (Sequence Length) |
|---|---|---|---|---|---|
| Contig72_s_at | Contig72_s_at_13 | + | 1 - 25 | GGGAGGCCCTTTCGGAATCAAGCAA | PUT-161a-Hordeum_vulgare-61637_(467) PUT-161a-Hordeum_vulgare-5942_(1797) PUT-161a-Hordeum_vulgare-14959_(563) PUT-157a-Hordeum_vulgare-70245_(467) PUT-157a-Hordeum_vulgare-43328_(563) PUT-157a-Hordeum_vulgare-39765_(1797) PUT-155a-Hordeum_vulgare-72981_(467) PUT-155a-Hordeum_vulgare-102781_(563) PUT-155a-Hordeum_vulgare-101984_(1797) PUT-154a-Hordeum_vulgare-107816_(467) PUT-154a-Hordeum_vulgare-102994_(563) PUT-154a-Hordeum_vulgare-101152_(1797) PUT-151a-Hordeum_vulgare-65464_(467) PUT-151a-Hordeum_vulgare-105969_(563) PUT-151a-Hordeum_vulgare-105944_(1797) Barley1_00426_(2038) Barley1_00072_(573) |
| Contig72_s_at_34 | + | 22 - 46 | GCAATTCTGTGCCATCGTAAACCCT | ||
| Contig72_s_at_65 | + | 53 - 77 | ATCGGCAATCTTGGCTATTGGCTCT | ||
| Contig72_s_at_136 | + | 124 - 148 | GGTCCTTCATGTCAGCCACGCTAAG | ||
| Contig72_s_at_165 | + | 153 - 177 | GACCACCGGGTCATTGATGGCGCCA | ||
| Contig72_s_at_394 | + | 382 - 406 | GTCGGCACACGATGTTTAACCTATT | ||
| Contig72_s_at_423 | + | 411 - 435 | GGCAAATGGCCGATACACCTTTTCC | ||
| Contig72_s_at_449 | + | 437 - 461 | CCTGCATTACCTGACCGGTGGAAAT | ||
| Contig72_s_at_466 | + | 454 - 478 | GTGGAAATTTGTCGCCTACTTTTGC | ||
| Contig72_s_at_487 | + | 475 - 499 | TTGCGCTGTGTTTTACTGAATCCGA | ||
| Contig72_s_at_527 | + | 515 - 539 | GTATCGGTTTGTTGCAAGGTGCTAA | ||
| rbaal31f01_s_at | rbaal31f01_s_at_106 | + | 218 - 242 | GAACCCGACGACCATGCTGCTGTAG | PUT-161a-Hordeum_vulgare-5942_(1797) PUT-157a-Hordeum_vulgare-39765_(1797) PUT-155a-Hordeum_vulgare-101984_(1797) PUT-154a-Hordeum_vulgare-101152_(1797) PUT-151a-Hordeum_vulgare-105944_(1797) Barley1_49750_(279) Barley1_00426_(2038) Barley1_00072_(573) |
| rbaal31f01_s_at_111 | + | 223 - 247 | CGACGACCATGCTGCTGTAGGAGTT | ||
| rbaal31f01_s_at_115 | + | 227 - 251 | GACCATGCTGCTGTAGGAGTTTCTT | ||
| rbaal31f01_s_at_119 | + | 231 - 255 | ATGCTGCTGTAGGAGTTTCTTTTTT | ||
| rbaal31f01_s_at_139 | + | 251 - 275 | TTTTTTCTGCTGTAAATGATGATGA | ||
| rbaal31f01_s_at_157 | + | 269 - 293 | ATGATGATGAGAGCAGTTTTTCTGT | ||
| rbaal31f01_s_at_169 | + | 281 - 305 | GCAGTTTTTCTGTGTAGGCTCTCAT | ||
| rbaal31f01_s_at_172 | + | 284 - 308 | GTTTTTCTGTGTAGGCTCTCATAAA | ||
| rbaal31f01_s_at_182 | + | 294 - 318 | GTAGGCTCTCATAAATAAAGACCAC | ||
| rbaal31f01_s_at_223 | + | 335 - 359 | TTTTGGCAATGAGGGCTTGGGAACC | ||
| rbaal31f01_s_at_233 | + | 345 - 369 | GAGGGCTTGGGAACCAAGAGCAAAC |