Vector Contamination List

At PlantGDB, efforts are undertaken to identify and remove all contaminant DNA so that a clean dataset is made available to researchers. Here, we use the Vmatch program (with options -l 50 -identity 90) to screen EST sequences against UniVec for vector contaminations as well as against E. coli genomes for bacterial sequences contaminations. The table lists the individual contaminated sequence. (Return to Vector Contamination menu)



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Sequence ID Organism Sequence Type Contamination Type
164180020Cenchrus_ciliarisESTVector
164183610Cenchrus_ciliarisESTVector
164067274Cenchrus_ciliarisESTVector
163967877Cenchrus_ciliarisESTVector
164071129Cenchrus_ciliarisESTVector
163974007Cenchrus_ciliarisESTVector
163974009Cenchrus_ciliarisESTVector
163976086Cenchrus_ciliarisESTVector
164073283Cenchrus_ciliarisESTVector
164082165Cenchrus_ciliarisESTVector
164083049Cenchrus_ciliarisESTVector
164085702Cenchrus_ciliarisESTVector
164103738Cenchrus_ciliarisESTVector
164104502Cenchrus_ciliarisESTVector
164183635Cenchrus_ciliarisESTVector
164184555Cenchrus_ciliarisESTVector
163994869Cenchrus_ciliarisESTVector
164000746Cenchrus_ciliarisESTVector
164000747Cenchrus_ciliarisESTVector
164002707Cenchrus_ciliarisESTVector
164004670Cenchrus_ciliarisESTVector
164004671Cenchrus_ciliarisESTVector
164006640Cenchrus_ciliarisESTVector
164112658Cenchrus_ciliarisESTVector
164008597Cenchrus_ciliarisESTVector
164008599Cenchrus_ciliarisESTVector
164008600Cenchrus_ciliarisESTVector
164113551Cenchrus_ciliarisESTVector
164102827Cenchrus_ciliarisESTVector
164114450Cenchrus_ciliarisESTVector
164114451Cenchrus_ciliarisESTVector
164114452Cenchrus_ciliarisESTVector
164104364Cenchrus_ciliarisESTVector
164132378Cenchrus_ciliarisESTVector
164132998Cenchrus_ciliarisESTVector
164106664Cenchrus_ciliarisESTVector
164134217Cenchrus_ciliarisESTVector
164134222Cenchrus_ciliarisESTVector
164136071Cenchrus_ciliarisESTVector
164151955Cenchrus_ciliarisESTVector
164153849Cenchrus_ciliarisESTVector
164178279Cenchrus_ciliarisESTVector
164157659Cenchrus_ciliarisESTVector
163974028Cenchrus_ciliarisESTVector
164161109Cenchrus_ciliarisESTVector
164162825Cenchrus_ciliarisESTVector
164164542Cenchrus_ciliarisESTVector
164165368Cenchrus_ciliarisESTVector
164167089Cenchrus_ciliarisESTVector
164080106Cenchrus_ciliarisESTVector
164080108Cenchrus_ciliarisESTVector
164168814Cenchrus_ciliarisESTVector
164168816Cenchrus_ciliarisESTVector
164169671Cenchrus_ciliarisESTVector
164181960Cenchrus_ciliarisESTVector
164072050Cenchrus_ciliarisESTVector
164185568Cenchrus_ciliarisESTVector
164075471Cenchrus_ciliarisESTVector
164080117Cenchrus_ciliarisESTVector
164080119Cenchrus_ciliarisESTVector
164150950Cenchrus_ciliarisESTVector
164150951Cenchrus_ciliarisESTVector
164198675Cenchrus_ciliarisESTVector
164216353Cenchrus_ciliarisESTVector
164212884Cenchrus_ciliarisESTVector
164213634Cenchrus_ciliarisESTVector
164013187Cenchrus_ciliarisESTVector
164014524Cenchrus_ciliarisESTVector
163970186Cenchrus_ciliarisESTVector
164132297Cenchrus_ciliarisESTVector
164132298Cenchrus_ciliarisESTVector
164132920Cenchrus_ciliarisESTVector
164132921Cenchrus_ciliarisESTVector
164134129Cenchrus_ciliarisESTVector
164135369Cenchrus_ciliarisESTVector
163989545Cenchrus_ciliarisESTVector
163991391Cenchrus_ciliarisESTVector
164209254Cenchrus_ciliarisESTVector
164209255Cenchrus_ciliarisESTVector
164209259Cenchrus_ciliarisESTVector
164209989Cenchrus_ciliarisESTVector
164034018Cenchrus_ciliarisESTVector
164211455Cenchrus_ciliarisESTVector
164211456Cenchrus_ciliarisESTVector
164212190Cenchrus_ciliarisESTVector
164038038Cenchrus_ciliarisESTVector
164212921Cenchrus_ciliarisESTVector
164214403Cenchrus_ciliarisESTVector
164033907Cenchrus_ciliarisESTVector
164033908Cenchrus_ciliarisESTVector
164043549Cenchrus_ciliarisESTVector
164035222Cenchrus_ciliarisESTVector
164035223Cenchrus_ciliarisESTVector
164044922Cenchrus_ciliarisESTVector
164036570Cenchrus_ciliarisESTVector
164047522Cenchrus_ciliarisESTVector
164048825Cenchrus_ciliarisESTVector
164103609Cenchrus_ciliarisESTVector
164103610Cenchrus_ciliarisESTVector
164104377Cenchrus_ciliarisESTVector

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