Vector Contamination List
At PlantGDB, efforts are undertaken to identify and remove all contaminant DNA so that a clean dataset is made available to researchers. Here, we use the Vmatch program (with options -l 50 -identity 90) to screen EST sequences against UniVec for vector contaminations as well as against E. coli genomes for bacterial sequences contaminations. The table lists the individual contaminated sequence. (Return to Vector Contamination menu)
| Sequence ID | Organism | Sequence Type | Contamination Type |
|---|---|---|---|
| 256007367 | Cajanus_cajan | EST | Vector |
| 256007372 | Cajanus_cajan | EST | Vector |
| 256007373 | Cajanus_cajan | EST | Vector |
| 256007375 | Cajanus_cajan | EST | Vector |
| 256007380 | Cajanus_cajan | EST | Vector |
| 256007382 | Cajanus_cajan | EST | Vector |
| 256007383 | Cajanus_cajan | EST | Vector |
| 256026380 | Cajanus_cajan | EST | Vector |
| 256026381 | Cajanus_cajan | EST | Vector |
| 256026382 | Cajanus_cajan | EST | Vector |
| 256026383 | Cajanus_cajan | EST | Vector |
| 198404551 | Cajanus_cajan | EST | Vector |
| 198404552 | Cajanus_cajan | EST | Vector |
| 198404553 | Cajanus_cajan | EST | Vector |
| 198404554 | Cajanus_cajan | EST | Vector |
| 198404555 | Cajanus_cajan | EST | Vector |
| 198404556 | Cajanus_cajan | EST | Vector |
| 198404558 | Cajanus_cajan | EST | Vector |
| 198404559 | Cajanus_cajan | EST | Vector |
| 198404560 | Cajanus_cajan | EST | Vector |
| 198404561 | Cajanus_cajan | EST | Vector |
| 198404564 | Cajanus_cajan | EST | Vector |
| 198404565 | Cajanus_cajan | EST | Vector |
| 198404566 | Cajanus_cajan | EST | Vector |
| 198404568 | Cajanus_cajan | EST | Vector |
| 198404571 | Cajanus_cajan | EST | Vector |
| 198404575 | Cajanus_cajan | EST | Vector |
| 40485981 | Cajanus_cajan | EST | Vector |
| 284452873 | Cajanus_cajan | EST | Vector |
| 284452874 | Cajanus_cajan | EST | Vector |
| 284452876 | Cajanus_cajan | EST | Vector |
| 284452882 | Cajanus_cajan | EST | Vector |
| 284452886 | Cajanus_cajan | EST | Vector |
| 284452888 | Cajanus_cajan | EST | Vector |
| 284452057 | Cajanus_cajan | EST | Vector |
| 284452058 | Cajanus_cajan | EST | Vector |
| 284452061 | Cajanus_cajan | EST | Vector |
| 284452063 | Cajanus_cajan | EST | Vector |
| 284452065 | Cajanus_cajan | EST | Vector |
| 284452067 | Cajanus_cajan | EST | Vector |
| 284452071 | Cajanus_cajan | EST | Vector |
| 284452073 | Cajanus_cajan | EST | Vector |
| 284452079 | Cajanus_cajan | EST | Vector |
| 284452080 | Cajanus_cajan | EST | Vector |
| 284452081 | Cajanus_cajan | EST | Vector |
| 284452085 | Cajanus_cajan | EST | Vector |
| 284452087 | Cajanus_cajan | EST | Vector |
| 284452089 | Cajanus_cajan | EST | Vector |
| 284452091 | Cajanus_cajan | EST | Vector |
| 284452093 | Cajanus_cajan | EST | Vector |
| 284452097 | Cajanus_cajan | EST | Vector |
| 284452098 | Cajanus_cajan | EST | Vector |
| 284452100 | Cajanus_cajan | EST | Vector |
| 284452102 | Cajanus_cajan | EST | Vector |
| 284452104 | Cajanus_cajan | EST | Vector |
| 284452106 | Cajanus_cajan | EST | Vector |
| 284452108 | Cajanus_cajan | EST | Vector |
| 284452110 | Cajanus_cajan | EST | Vector |
| 284452120 | Cajanus_cajan | EST | Vector |
| 284452122 | Cajanus_cajan | EST | Vector |
| 284452124 | Cajanus_cajan | EST | Vector |
| 284452126 | Cajanus_cajan | EST | Vector |
| 284452130 | Cajanus_cajan | EST | Vector |
| 284452132 | Cajanus_cajan | EST | Vector |
| 284452134 | Cajanus_cajan | EST | Vector |
| 284452144 | Cajanus_cajan | EST | Vector |
| 284452152 | Cajanus_cajan | EST | Vector |
| 284452154 | Cajanus_cajan | EST | Vector |
| 284452156 | Cajanus_cajan | EST | Vector |
| 284452158 | Cajanus_cajan | EST | Vector |
| 284452163 | Cajanus_cajan | EST | Vector |
| 284452168 | Cajanus_cajan | EST | Vector |
| 284452170 | Cajanus_cajan | EST | Vector |
| 284452172 | Cajanus_cajan | EST | Vector |
| 284452174 | Cajanus_cajan | EST | Vector |
| 284452176 | Cajanus_cajan | EST | Vector |
| 284452179 | Cajanus_cajan | EST | Vector |
| 284452185 | Cajanus_cajan | EST | Vector |
| 284452188 | Cajanus_cajan | EST | Vector |
| 284452189 | Cajanus_cajan | EST | Vector |
| 284452190 | Cajanus_cajan | EST | Vector |
| 284452191 | Cajanus_cajan | EST | Vector |
| 284452197 | Cajanus_cajan | EST | Vector |
| 284452199 | Cajanus_cajan | EST | Vector |
| 284452201 | Cajanus_cajan | EST | Vector |
| 284452203 | Cajanus_cajan | EST | Vector |
| 284452207 | Cajanus_cajan | EST | Vector |
| 284452209 | Cajanus_cajan | EST | Vector |
| 284452212 | Cajanus_cajan | EST | Vector |
| 284452214 | Cajanus_cajan | EST | Vector |
| 284452217 | Cajanus_cajan | EST | Vector |
| 284452218 | Cajanus_cajan | EST | Vector |
| 284452220 | Cajanus_cajan | EST | Vector |
| 284452223 | Cajanus_cajan | EST | Vector |
| 284452224 | Cajanus_cajan | EST | Vector |
| 284452228 | Cajanus_cajan | EST | Vector |
| 284452229 | Cajanus_cajan | EST | Vector |
| 284452230 | Cajanus_cajan | EST | Vector |
| 284452232 | Cajanus_cajan | EST | Vector |
| 284452239 | Cajanus_cajan | EST | Vector |