Vector Contamination List

At PlantGDB, efforts are undertaken to identify and remove all contaminant DNA so that a clean dataset is made available to researchers. Here, we use the Vmatch program (with options -l 50 -identity 90) to screen EST sequences against UniVec for vector contaminations as well as against E. coli genomes for bacterial sequences contaminations. The table lists the individual contaminated sequence. (Return to Vector Contamination menu)



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Sequence ID Organism Sequence Type Contamination Type
256007367Cajanus_cajanESTVector
256007372Cajanus_cajanESTVector
256007373Cajanus_cajanESTVector
256007375Cajanus_cajanESTVector
256007380Cajanus_cajanESTVector
256007382Cajanus_cajanESTVector
256007383Cajanus_cajanESTVector
256026380Cajanus_cajanESTVector
256026381Cajanus_cajanESTVector
256026382Cajanus_cajanESTVector
256026383Cajanus_cajanESTVector
198404551Cajanus_cajanESTVector
198404552Cajanus_cajanESTVector
198404553Cajanus_cajanESTVector
198404554Cajanus_cajanESTVector
198404555Cajanus_cajanESTVector
198404556Cajanus_cajanESTVector
198404558Cajanus_cajanESTVector
198404559Cajanus_cajanESTVector
198404560Cajanus_cajanESTVector
198404561Cajanus_cajanESTVector
198404564Cajanus_cajanESTVector
198404565Cajanus_cajanESTVector
198404566Cajanus_cajanESTVector
198404568Cajanus_cajanESTVector
198404571Cajanus_cajanESTVector
198404575Cajanus_cajanESTVector
40485981Cajanus_cajanESTVector
284452873Cajanus_cajanESTVector
284452874Cajanus_cajanESTVector
284452876Cajanus_cajanESTVector
284452882Cajanus_cajanESTVector
284452886Cajanus_cajanESTVector
284452888Cajanus_cajanESTVector
284452057Cajanus_cajanESTVector
284452058Cajanus_cajanESTVector
284452061Cajanus_cajanESTVector
284452063Cajanus_cajanESTVector
284452065Cajanus_cajanESTVector
284452067Cajanus_cajanESTVector
284452071Cajanus_cajanESTVector
284452073Cajanus_cajanESTVector
284452079Cajanus_cajanESTVector
284452080Cajanus_cajanESTVector
284452081Cajanus_cajanESTVector
284452085Cajanus_cajanESTVector
284452087Cajanus_cajanESTVector
284452089Cajanus_cajanESTVector
284452091Cajanus_cajanESTVector
284452093Cajanus_cajanESTVector
284452097Cajanus_cajanESTVector
284452098Cajanus_cajanESTVector
284452100Cajanus_cajanESTVector
284452102Cajanus_cajanESTVector
284452104Cajanus_cajanESTVector
284452106Cajanus_cajanESTVector
284452108Cajanus_cajanESTVector
284452110Cajanus_cajanESTVector
284452120Cajanus_cajanESTVector
284452122Cajanus_cajanESTVector
284452124Cajanus_cajanESTVector
284452126Cajanus_cajanESTVector
284452130Cajanus_cajanESTVector
284452132Cajanus_cajanESTVector
284452134Cajanus_cajanESTVector
284452144Cajanus_cajanESTVector
284452152Cajanus_cajanESTVector
284452154Cajanus_cajanESTVector
284452156Cajanus_cajanESTVector
284452158Cajanus_cajanESTVector
284452163Cajanus_cajanESTVector
284452168Cajanus_cajanESTVector
284452170Cajanus_cajanESTVector
284452172Cajanus_cajanESTVector
284452174Cajanus_cajanESTVector
284452176Cajanus_cajanESTVector
284452179Cajanus_cajanESTVector
284452185Cajanus_cajanESTVector
284452188Cajanus_cajanESTVector
284452189Cajanus_cajanESTVector
284452190Cajanus_cajanESTVector
284452191Cajanus_cajanESTVector
284452197Cajanus_cajanESTVector
284452199Cajanus_cajanESTVector
284452201Cajanus_cajanESTVector
284452203Cajanus_cajanESTVector
284452207Cajanus_cajanESTVector
284452209Cajanus_cajanESTVector
284452212Cajanus_cajanESTVector
284452214Cajanus_cajanESTVector
284452217Cajanus_cajanESTVector
284452218Cajanus_cajanESTVector
284452220Cajanus_cajanESTVector
284452223Cajanus_cajanESTVector
284452224Cajanus_cajanESTVector
284452228Cajanus_cajanESTVector
284452229Cajanus_cajanESTVector
284452230Cajanus_cajanESTVector
284452232Cajanus_cajanESTVector
284452239Cajanus_cajanESTVector

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