Vector Contamination List

At PlantGDB, efforts are undertaken to identify and remove all contaminant DNA so that a clean dataset is made available to researchers. Here, we use the Vmatch program (with options -l 50 -identity 90) to screen EST sequences against UniVec for vector contaminations as well as against E. coli genomes for bacterial sequences contaminations. The table lists the individual contaminated sequence. (Return to Vector Contamination menu)



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Sequence ID Organism Sequence Type Contamination Type
150938856Brassica_carinataESTVector
150938876Brassica_carinataESTVector
150938909Brassica_carinataESTVector
150938953Brassica_carinataESTVector
150938985Brassica_carinataESTVector
150140125Brassica_carinataESTVector
150140142Brassica_carinataESTVector
150140151Brassica_carinataESTVector
150140153Brassica_carinataESTVector
150140178Brassica_carinataESTVector
150140183Brassica_carinataESTVector
150140184Brassica_carinataESTVector
150140190Brassica_carinataESTVector
150140195Brassica_carinataESTVector
150140208Brassica_carinataESTVector
150140209Brassica_carinataESTVector
150140225Brassica_carinataESTVector
150140238Brassica_carinataESTVector
150140251Brassica_carinataESTVector
150140265Brassica_carinataESTVector
150140273Brassica_carinataESTVector
150145115Brassica_carinataESTVector
150145116Brassica_carinataESTVector
150145124Brassica_carinataESTVector
150145126Brassica_carinataESTVector
150146652Brassica_carinataESTVector
150146655Brassica_carinataESTVector
150146658Brassica_carinataESTVector
150146664Brassica_carinataESTVector
150146690Brassica_carinataESTVector
150145172Brassica_carinataESTVector
150145179Brassica_carinataESTVector
150145180Brassica_carinataESTVector
150145185Brassica_carinataESTVector
150146725Brassica_carinataESTVector
150145189Brassica_carinataESTVector
150146731Brassica_carinataESTVector
150146732Brassica_carinataESTVector
150146736Brassica_carinataESTVector
150146739Brassica_carinataESTVector
150145203Brassica_carinataESTVector
150146749Brassica_carinataESTVector
150145213Brassica_carinataESTVector
150146755Brassica_carinataESTVector
150146768Brassica_carinataESTVector
150145223Brassica_carinataESTVector
150146796Brassica_carinataESTVector
150145248Brassica_carinataESTVector
150145249Brassica_carinataESTVector
150145251Brassica_carinataESTVector
150146801Brassica_carinataESTVector
150145257Brassica_carinataESTVector
150146804Brassica_carinataESTVector
150146820Brassica_carinataESTVector
150146827Brassica_carinataESTVector
150145279Brassica_carinataESTVector
150145282Brassica_carinataESTVector
150146844Brassica_carinataESTVector
150145304Brassica_carinataESTVector
150145305Brassica_carinataESTVector
150146862Brassica_carinataESTVector
150146868Brassica_carinataESTVector
150146878Brassica_carinataESTVector
150145325Brassica_carinataESTVector
150145326Brassica_carinataESTVector
150146891Brassica_carinataESTVector
150146899Brassica_carinataESTVector
150145342Brassica_carinataESTVector
150146905Brassica_carinataESTVector
150145347Brassica_carinataESTVector
150145351Brassica_carinataESTVector
150145352Brassica_carinataESTVector
150146919Brassica_carinataESTVector
150145355Brassica_carinataESTVector
150145358Brassica_carinataESTVector
150146928Brassica_carinataESTVector
150146929Brassica_carinataESTVector
150146937Brassica_carinataESTVector
150146943Brassica_carinataESTVector
150146964Brassica_carinataESTVector
150145407Brassica_carinataESTVector
150145419Brassica_carinataESTVector
150145428Brassica_carinataESTVector
150147011Brassica_carinataESTVector
150147031Brassica_carinataESTVector
150145456Brassica_carinataESTVector
150147037Brassica_carinataESTVector
150145464Brassica_carinataESTVector
150147058Brassica_carinataESTVector
150147060Brassica_carinataESTVector
150147065Brassica_carinataESTVector
150145484Brassica_carinataESTVector
150147085Brassica_carinataESTVector
150147092Brassica_carinataESTVector
150145507Brassica_carinataESTVector
150147099Brassica_carinataESTVector
150147104Brassica_carinataESTVector
150145515Brassica_carinataESTVector
150145519Brassica_carinataESTVector
150145521Brassica_carinataESTVector

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