Vector Contamination List

At PlantGDB, efforts are undertaken to identify and remove all contaminant DNA so that a clean dataset is made available to researchers. Here, we use the Vmatch program (with options -l 50 -identity 90) to screen EST sequences against UniVec for vector contaminations as well as against E. coli genomes for bacterial sequences contaminations. The table lists the individual contaminated sequence. (Return to Vector Contamination menu)



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Sequence ID Organism Sequence Type Contamination Type
159023969Artemisia_annuaESTVector
159023711Artemisia_annuaESTVector
159023852Artemisia_annuaESTVector
159023860Artemisia_annuaESTVector
159023881Artemisia_annuaESTVector
159024002Artemisia_annuaESTVector
159190285Artemisia_annuaESTVector
159189944Artemisia_annuaESTVector
159190800Artemisia_annuaESTVector
159190834Artemisia_annuaESTVector
159189791Artemisia_annuaESTVector
159189868Artemisia_annuaESTVector
159189920Artemisia_annuaESTVector
159189996Artemisia_annuaESTVector
159190011Artemisia_annuaESTVector
159190096Artemisia_annuaESTVector
159191456Artemisia_annuaESTVector
159191248Artemisia_annuaESTVector
159628867Artemisia_annuaESTVector
159630417Artemisia_annuaESTVector
159646633Artemisia_annuaESTVector
159628876Artemisia_annuaESTVector
159662918Artemisia_annuaESTVector
159681113Artemisia_annuaESTVector
159681114Artemisia_annuaESTVector
159682075Artemisia_annuaESTVector
159697670Artemisia_annuaESTVector
159701771Artemisia_annuaESTVector
159758956Artemisia_annuaESTVector
159760215Artemisia_annuaESTVector
159768329Artemisia_annuaESTVector
159755114Artemisia_annuaESTVector
159755972Artemisia_annuaESTVector
159743699Artemisia_annuaESTVector
159752836Artemisia_annuaESTVector
159753869Artemisia_annuaESTVector
159772863Artemisia_annuaESTVector
159683253Artemisia_annuaESTVector
159594665Artemisia_annuaESTVector
159598507Artemisia_annuaESTVector
159739286Artemisia_annuaESTVector
159762281Artemisia_annuaESTVector
159762707Artemisia_annuaESTVector
159595895Artemisia_annuaESTVector
159599753Artemisia_annuaESTVector
159606444Artemisia_annuaESTVector
159608849Artemisia_annuaESTVector
159608850Artemisia_annuaESTVector
159611308Artemisia_annuaESTVector
159611316Artemisia_annuaESTVector
159773266Artemisia_annuaESTVector
159746186Artemisia_annuaESTVector
159748325Artemisia_annuaESTVector
159261379Artemisia_annuaESTVector
159660375Artemisia_annuaESTVector
159661642Artemisia_annuaESTVector
159747279Artemisia_annuaESTVector
159783495Artemisia_annuaESTVector
159583429Artemisia_annuaESTVector
159655371Artemisia_annuaESTVector
159657598Artemisia_annuaESTVector
159520780Artemisia_annuaESTVector
159583445Artemisia_annuaESTVector
159261410Artemisia_annuaESTVector
159520795Artemisia_annuaESTVector
159742764Artemisia_annuaESTVector
159520838Artemisia_annuaESTVector
159584558Artemisia_annuaESTVector
159584559Artemisia_annuaESTVector
159762271Artemisia_annuaESTVector
159776183Artemisia_annuaESTVector
159777827Artemisia_annuaESTVector
159636427Artemisia_annuaESTVector
159520894Artemisia_annuaESTVector
159603848Artemisia_annuaESTVector
159607672Artemisia_annuaESTVector
159725364Artemisia_annuaESTVector
159726380Artemisia_annuaESTVector
159656557Artemisia_annuaESTVector
159712581Artemisia_annuaESTVector
159714376Artemisia_annuaESTVector
159715303Artemisia_annuaESTVector
159750466Artemisia_annuaESTVector
159751173Artemisia_annuaESTVector
159749446Artemisia_annuaESTVector
159745274Artemisia_annuaESTVector
159747330Artemisia_annuaESTVector
159748417Artemisia_annuaESTVector
159669615Artemisia_annuaESTVector
159673110Artemisia_annuaESTVector
159731324Artemisia_annuaESTVector
159731325Artemisia_annuaESTVector
159687028Artemisia_annuaESTVector
159687032Artemisia_annuaESTVector
159691894Artemisia_annuaESTVector
159779034Artemisia_annuaESTVector
159653278Artemisia_annuaESTVector
159774337Artemisia_annuaESTVector
159758583Artemisia_annuaESTVector
159260654Artemisia_annuaESTVector

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