Vector Contamination List
At PlantGDB, efforts are undertaken to identify and remove all contaminant DNA so that a clean dataset is made available to researchers. Here, we use the Vmatch program (with options -l 50 -identity 90) to screen EST sequences against UniVec for vector contaminations as well as against E. coli genomes for bacterial sequences contaminations. The table lists the individual contaminated sequence. (Return to Vector Contamination menu)
| Sequence ID | Organism | Sequence Type | Contamination Type |
|---|---|---|---|
| 107954515 | Arachis_hypogaea | EST | Vector |
| 107954525 | Arachis_hypogaea | EST | Vector |
| 107954530 | Arachis_hypogaea | EST | Vector |
| 107954532 | Arachis_hypogaea | EST | Vector |
| 107954565 | Arachis_hypogaea | EST | Vector |
| 107954566 | Arachis_hypogaea | EST | Vector |
| 107954577 | Arachis_hypogaea | EST | Vector |
| 107954581 | Arachis_hypogaea | EST | Vector |
| 107954588 | Arachis_hypogaea | EST | Vector |
| 107954591 | Arachis_hypogaea | EST | Vector |
| 107954605 | Arachis_hypogaea | EST | Vector |
| 107954607 | Arachis_hypogaea | EST | Vector |
| 107954620 | Arachis_hypogaea | EST | Vector |
| 107954622 | Arachis_hypogaea | EST | Vector |
| 107954629 | Arachis_hypogaea | EST | Vector |
| 107954641 | Arachis_hypogaea | EST | Vector |
| 107954643 | Arachis_hypogaea | EST | Vector |
| 107954648 | Arachis_hypogaea | EST | Vector |
| 107954652 | Arachis_hypogaea | EST | Vector |
| 107954658 | Arachis_hypogaea | EST | Vector |
| 107954661 | Arachis_hypogaea | EST | Vector |
| 107954663 | Arachis_hypogaea | EST | Vector |
| 107954665 | Arachis_hypogaea | EST | Vector |
| 107954667 | Arachis_hypogaea | EST | Vector |
| 107954668 | Arachis_hypogaea | EST | Vector |
| 107954669 | Arachis_hypogaea | EST | Vector |
| 107954697 | Arachis_hypogaea | EST | Vector |
| 107954711 | Arachis_hypogaea | EST | Vector |
| 107954713 | Arachis_hypogaea | EST | Vector |
| 107954722 | Arachis_hypogaea | EST | Vector |
| 107954733 | Arachis_hypogaea | EST | Vector |
| 107954737 | Arachis_hypogaea | EST | Vector |
| 107954764 | Arachis_hypogaea | EST | Vector |
| 107954768 | Arachis_hypogaea | EST | Vector |
| 107954776 | Arachis_hypogaea | EST | Vector |
| 107954777 | Arachis_hypogaea | EST | Vector |
| 107954779 | Arachis_hypogaea | EST | Vector |
| 107954782 | Arachis_hypogaea | EST | Vector |
| 107954784 | Arachis_hypogaea | EST | Vector |
| 107954786 | Arachis_hypogaea | EST | Vector |
| 107954793 | Arachis_hypogaea | EST | Vector |
| 107954800 | Arachis_hypogaea | EST | Vector |
| 107954802 | Arachis_hypogaea | EST | Vector |
| 107954804 | Arachis_hypogaea | EST | Vector |
| 107954808 | Arachis_hypogaea | EST | Vector |
| 107954815 | Arachis_hypogaea | EST | Vector |
| 107954826 | Arachis_hypogaea | EST | Vector |
| 107954835 | Arachis_hypogaea | EST | Vector |
| 107954842 | Arachis_hypogaea | EST | Vector |
| 107954844 | Arachis_hypogaea | EST | Vector |
| 107954867 | Arachis_hypogaea | EST | Vector |
| 107954869 | Arachis_hypogaea | EST | Vector |
| 107954871 | Arachis_hypogaea | EST | Vector |
| 107954873 | Arachis_hypogaea | EST | Vector |
| 107954875 | Arachis_hypogaea | EST | Vector |
| 107954878 | Arachis_hypogaea | EST | Vector |
| 107954880 | Arachis_hypogaea | EST | Vector |
| 107954913 | Arachis_hypogaea | EST | Vector |
| 107954954 | Arachis_hypogaea | EST | Vector |
| 107954955 | Arachis_hypogaea | EST | Vector |
| 107954972 | Arachis_hypogaea | EST | Vector |
| 107954975 | Arachis_hypogaea | EST | Vector |
| 107954980 | Arachis_hypogaea | EST | Vector |
| 107954993 | Arachis_hypogaea | EST | Vector |
| 107955016 | Arachis_hypogaea | EST | Vector |
| 107955026 | Arachis_hypogaea | EST | Vector |
| 107955028 | Arachis_hypogaea | EST | Vector |
| 107955033 | Arachis_hypogaea | EST | Vector |
| 107955035 | Arachis_hypogaea | EST | Vector |
| 108954650 | Arachis_hypogaea | EST | Vector |
| 108954652 | Arachis_hypogaea | EST | Vector |
| 108954655 | Arachis_hypogaea | EST | Vector |
| 108954657 | Arachis_hypogaea | EST | Vector |
| 108954658 | Arachis_hypogaea | EST | Vector |
| 108954665 | Arachis_hypogaea | EST | Vector |
| 108954667 | Arachis_hypogaea | EST | Vector |
| 108954692 | Arachis_hypogaea | EST | Vector |
| 108954697 | Arachis_hypogaea | EST | Vector |
| 108954711 | Arachis_hypogaea | EST | Vector |
| 108954712 | Arachis_hypogaea | EST | Vector |
| 108954714 | Arachis_hypogaea | EST | Vector |
| 108954715 | Arachis_hypogaea | EST | Vector |
| 108954717 | Arachis_hypogaea | EST | Vector |
| 108954754 | Arachis_hypogaea | EST | Vector |
| 108954759 | Arachis_hypogaea | EST | Vector |
| 108954765 | Arachis_hypogaea | EST | Vector |
| 108954797 | Arachis_hypogaea | EST | Vector |
| 108954801 | Arachis_hypogaea | EST | Vector |
| 108954803 | Arachis_hypogaea | EST | Vector |
| 108954805 | Arachis_hypogaea | EST | Vector |
| 108954806 | Arachis_hypogaea | EST | Vector |
| 108954807 | Arachis_hypogaea | EST | Vector |
| 108954817 | Arachis_hypogaea | EST | Vector |
| 108954819 | Arachis_hypogaea | EST | Vector |
| 108954826 | Arachis_hypogaea | EST | Vector |
| 108954839 | Arachis_hypogaea | EST | Vector |
| 108954840 | Arachis_hypogaea | EST | Vector |
| 108954844 | Arachis_hypogaea | EST | Vector |
| 108954852 | Arachis_hypogaea | EST | Vector |
| 108954864 | Arachis_hypogaea | EST | Vector |