Vector Contamination List

At PlantGDB, efforts are undertaken to identify and remove all contaminant DNA so that a clean dataset is made available to researchers. Here, we use the Vmatch program (with options -l 50 -identity 90) to screen EST sequences against UniVec for vector contaminations as well as against E. coli genomes for bacterial sequences contaminations. The table lists the individual contaminated sequence. (Return to Vector Contamination menu)



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Sequence ID Organism Sequence Type Contamination Type
31660827Antirrhinum_majusESTVector
31660851Antirrhinum_majusESTVector
31660975Antirrhinum_majusESTVector
31661074Antirrhinum_majusESTVector
31661154Antirrhinum_majusESTVector
31661200Antirrhinum_majusESTVector
31661288Antirrhinum_majusESTVector
31661532Antirrhinum_majusESTVector
31661573Antirrhinum_majusESTVector
31661579Antirrhinum_majusESTVector
31661652Antirrhinum_majusESTVector
31661655Antirrhinum_majusESTVector
31661718Antirrhinum_majusESTVector
31661738Antirrhinum_majusESTVector
31661810Antirrhinum_majusESTVector
31661826Antirrhinum_majusESTVector
31661843Antirrhinum_majusESTVector
31661850Antirrhinum_majusESTVector
31661922Antirrhinum_majusESTVector
31661969Antirrhinum_majusESTVector
31662065Antirrhinum_majusESTVector
31662168Antirrhinum_majusESTVector
31662403Antirrhinum_majusESTVector
31662517Antirrhinum_majusESTVector
31662528Antirrhinum_majusESTVector
31662561Antirrhinum_majusESTVector
31662619Antirrhinum_majusESTVector
31662667Antirrhinum_majusESTVector
31662843Antirrhinum_majusESTVector
31662845Antirrhinum_majusESTVector
31662894Antirrhinum_majusESTVector
31662950Antirrhinum_majusESTVector
31662983Antirrhinum_majusESTVector
33293924Antirrhinum_majusESTVector
33293972Antirrhinum_majusESTVector
33294027Antirrhinum_majusESTVector
33294028Antirrhinum_majusESTVector
33294031Antirrhinum_majusESTVector
33294033Antirrhinum_majusESTVector
33294034Antirrhinum_majusESTVector
33294036Antirrhinum_majusESTVector
33294037Antirrhinum_majusESTVector
33294038Antirrhinum_majusESTVector
33294040Antirrhinum_majusESTVector
33294041Antirrhinum_majusESTVector
33294042Antirrhinum_majusESTVector
33294043Antirrhinum_majusESTVector
33294044Antirrhinum_majusESTVector
33294045Antirrhinum_majusESTVector
33294047Antirrhinum_majusESTVector
33294048Antirrhinum_majusESTVector
33294049Antirrhinum_majusESTVector
33294115Antirrhinum_majusESTVector
33294382Antirrhinum_majusESTVector
51052865Antirrhinum_majusESTVector
51052948Antirrhinum_majusESTVector
51052974Antirrhinum_majusESTVector
51052989Antirrhinum_majusESTVector
51053171Antirrhinum_majusESTVector
51053279Antirrhinum_majusESTVector
51053303Antirrhinum_majusESTVector
51053393Antirrhinum_majusESTVector
51053601Antirrhinum_majusESTVector
51053605Antirrhinum_majusESTVector
51053781Antirrhinum_majusESTVector
51053823Antirrhinum_majusESTVector
51053829Antirrhinum_majusESTVector
51053831Antirrhinum_majusESTVector
51054000Antirrhinum_majusESTVector
51054032Antirrhinum_majusESTVector
51054068Antirrhinum_majusESTVector
51054162Antirrhinum_majusESTVector
51054300Antirrhinum_majusESTVector
51054406Antirrhinum_majusESTVector
51054437Antirrhinum_majusESTVector
51054459Antirrhinum_majusESTVector
51054483Antirrhinum_majusESTVector
51054683Antirrhinum_majusESTVector
51054703Antirrhinum_majusESTVector
51054760Antirrhinum_majusESTVector
51054808Antirrhinum_majusESTVector
51054964Antirrhinum_majusESTVector
51054966Antirrhinum_majusESTVector
51055587Antirrhinum_majusESTVector
51055589Antirrhinum_majusESTVector
51055750Antirrhinum_majusESTVector
51056121Antirrhinum_majusESTVector
51057393Antirrhinum_majusESTVector
51057640Antirrhinum_majusESTVector
51057702Antirrhinum_majusESTVector
51058054Antirrhinum_majusESTVector
51058083Antirrhinum_majusESTVector
51058135Antirrhinum_majusESTVector
51058318Antirrhinum_majusESTVector
51058326Antirrhinum_majusESTVector
51058354Antirrhinum_majusESTVector
51058364Antirrhinum_majusESTVector
51058433Antirrhinum_majusESTVector
51058455Antirrhinum_majusESTVector
51058465Antirrhinum_majusESTVector

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