Vector Contamination List

At PlantGDB, efforts are undertaken to identify and remove all contaminant DNA so that a clean dataset is made available to researchers. Here, we use the Vmatch program (with options -l 50 -identity 90) to screen EST sequences against UniVec for vector contaminations as well as against E. coli genomes for bacterial sequences contaminations. The table lists the individual contaminated sequence. (Return to Vector Contamination menu)



Skip to page: 1 2 3 4
Sequence ID Organism Sequence Type Contamination Type
219838088Adiantum_capillus_venerisESTVector
219838114Adiantum_capillus_venerisESTVector
219837298Adiantum_capillus_venerisESTVector
219838141Adiantum_capillus_venerisESTVector
219835516Adiantum_capillus_venerisESTVector
219835637Adiantum_capillus_venerisESTVector
219836295Adiantum_capillus_venerisESTVector
219837134Adiantum_capillus_venerisESTVector
219837155Adiantum_capillus_venerisESTVector
219837159Adiantum_capillus_venerisESTVector
219837178Adiantum_capillus_venerisESTVector
219837184Adiantum_capillus_venerisESTVector
219837263Adiantum_capillus_venerisESTVector
219837942Adiantum_capillus_venerisESTVector
219838039Adiantum_capillus_venerisESTVector
219838643Adiantum_capillus_venerisESTVector
219835760Adiantum_capillus_venerisESTVector
219835764Adiantum_capillus_venerisESTVector
219839091Adiantum_capillus_venerisESTVector
219839105Adiantum_capillus_venerisESTVector
219835384Adiantum_capillus_venerisESTVector
219835349Adiantum_capillus_venerisESTVector
219838336Adiantum_capillus_venerisESTVector
219835422Adiantum_capillus_venerisESTVector
219835469Adiantum_capillus_venerisESTVector
219835498Adiantum_capillus_venerisESTVector
219835538Adiantum_capillus_venerisESTVector
219835585Adiantum_capillus_venerisESTVector
219835615Adiantum_capillus_venerisESTVector
219836208Adiantum_capillus_venerisESTVector
219836231Adiantum_capillus_venerisESTVector
219839134Adiantum_capillus_venerisESTVector
219839606Adiantum_capillus_venerisESTVector
219839617Adiantum_capillus_venerisESTVector
219839716Adiantum_capillus_venerisESTVector
219839735Adiantum_capillus_venerisESTVector
219840287Adiantum_capillus_venerisESTVector
219840341Adiantum_capillus_venerisESTVector
219840342Adiantum_capillus_venerisESTVector
219840385Adiantum_capillus_venerisESTVector
219840422Adiantum_capillus_venerisESTVector
219840437Adiantum_capillus_venerisESTVector
219840442Adiantum_capillus_venerisESTVector
219840469Adiantum_capillus_venerisESTVector
219840470Adiantum_capillus_venerisESTVector
219840711Adiantum_capillus_venerisESTVector
219840746Adiantum_capillus_venerisESTVector
219840747Adiantum_capillus_venerisESTVector
219840756Adiantum_capillus_venerisESTVector
219840778Adiantum_capillus_venerisESTVector
219840782Adiantum_capillus_venerisESTVector
219841227Adiantum_capillus_venerisESTVector
219836234Adiantum_capillus_venerisESTVector
219836264Adiantum_capillus_venerisESTVector
219836914Adiantum_capillus_venerisESTVector
219836994Adiantum_capillus_venerisESTVector
219837025Adiantum_capillus_venerisESTVector
219837056Adiantum_capillus_venerisESTVector
219837075Adiantum_capillus_venerisESTVector
219837750Adiantum_capillus_venerisESTVector
219837784Adiantum_capillus_venerisESTVector
219837798Adiantum_capillus_venerisESTVector
219835162Adiantum_capillus_venerisESTVector
219835184Adiantum_capillus_venerisESTVector
219835210Adiantum_capillus_venerisESTVector
219835219Adiantum_capillus_venerisESTVector
219835236Adiantum_capillus_venerisESTVector
219835272Adiantum_capillus_venerisESTVector
219835274Adiantum_capillus_venerisESTVector
219835288Adiantum_capillus_venerisESTVector
219835290Adiantum_capillus_venerisESTVector
219835300Adiantum_capillus_venerisESTVector
219836074Adiantum_capillus_venerisESTVector
219836099Adiantum_capillus_venerisESTVector
219836147Adiantum_capillus_venerisESTVector
219836166Adiantum_capillus_venerisESTVector
219836660Adiantum_capillus_venerisESTVector
219836793Adiantum_capillus_venerisESTVector
219838864Adiantum_capillus_venerisESTVector
219838866Adiantum_capillus_venerisESTVector
219838873Adiantum_capillus_venerisESTVector
219838903Adiantum_capillus_venerisESTVector
219838989Adiantum_capillus_venerisESTVector
219839889Adiantum_capillus_venerisESTVector
219839917Adiantum_capillus_venerisESTVector
219839945Adiantum_capillus_venerisESTVector
219840294Adiantum_capillus_venerisESTVector
219840303Adiantum_capillus_venerisESTVector
219840820Adiantum_capillus_venerisESTVector
219840898Adiantum_capillus_venerisESTVector
219840900Adiantum_capillus_venerisESTVector
219841052Adiantum_capillus_venerisESTVector
219841058Adiantum_capillus_venerisESTVector
219841088Adiantum_capillus_venerisESTVector
219841340Adiantum_capillus_venerisESTVector
219841397Adiantum_capillus_venerisESTVector
219841446Adiantum_capillus_venerisESTVector
219841551Adiantum_capillus_venerisESTVector
219841652Adiantum_capillus_venerisESTVector
219841653Adiantum_capillus_venerisESTVector

Loading Help Page...Thanks for your patience!

Loading Video...Thanks for your patience!

Loading Image...Thanks for your patience!