Vector Contamination List

At PlantGDB, efforts are undertaken to identify and remove all contaminant DNA so that a clean dataset is made available to researchers. Here, we use the Vmatch program (with options -l 50 -identity 90) to screen EST sequences against UniVec for vector contaminations as well as against E. coli genomes for bacterial sequences contaminations. The table lists the individual contaminated sequence. (Return to Vector Contamination menu)



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Sequence ID Organism Sequence Type Contamination Type
195210864Actinidia_chinensisESTVector
195236546Actinidia_chinensisESTVector
195197713Actinidia_chinensisESTVector
195207217Actinidia_chinensisESTVector
195319698Actinidia_chinensisESTVector
195319940Actinidia_chinensisESTVector
195308557Actinidia_chinensisESTVector
195285288Actinidia_chinensisESTVector
195233346Actinidia_chinensisESTVector
195302157Actinidia_chinensisESTVector
195237882Actinidia_chinensisESTVector
195270270Actinidia_chinensisESTVector
195287544Actinidia_chinensisESTVector
195235326Actinidia_chinensisESTVector
195225062Actinidia_chinensisESTVector
195285310Actinidia_chinensisESTVector
195240820Actinidia_chinensisESTVector
195253983Actinidia_chinensisESTVector
195296696Actinidia_chinensisESTVector
195300478Actinidia_chinensisESTVector
195263519Actinidia_chinensisESTVector
195214147Actinidia_chinensisESTVector
195273575Actinidia_chinensisESTVector
195320620Actinidia_chinensisESTVector
195251464Actinidia_chinensisESTVector
195297365Actinidia_chinensisESTVector
195200279Actinidia_chinensisESTVector
195314807Actinidia_chinensisESTVector
195315363Actinidia_chinensisESTVector
195229225Actinidia_chinensisESTVector
195271067Actinidia_chinensisESTVector
195249913Actinidia_chinensisESTVector
195315930Actinidia_chinensisESTVector
195253029Actinidia_chinensisESTVector
195323696Actinidia_chinensisESTVector
195276919Actinidia_chinensisESTVector
195276924Actinidia_chinensisESTVector
195278423Actinidia_chinensisESTVector
195278961Actinidia_chinensisESTVector
195256748Actinidia_chinensisESTVector
195257896Actinidia_chinensisESTVector
195258468Actinidia_chinensisESTVector
195289280Actinidia_chinensisESTVector
195291754Actinidia_chinensisESTVector
195292371Actinidia_chinensisESTVector
195295605Actinidia_chinensisESTVector
195296800Actinidia_chinensisESTVector
195303397Actinidia_chinensisESTVector
195203107Actinidia_chinensisESTVector
195224475Actinidia_chinensisESTVector
195225565Actinidia_chinensisESTVector
195225905Actinidia_chinensisESTVector
195261973Actinidia_chinensisESTVector
195319201Actinidia_chinensisESTVector
195293826Actinidia_chinensisESTVector
195294423Actinidia_chinensisESTVector
195295020Actinidia_chinensisESTVector
195295617Actinidia_chinensisESTVector
195227377Actinidia_chinensisESTVector
195227768Actinidia_chinensisESTVector
195297396Actinidia_chinensisESTVector
195208284Actinidia_chinensisESTVector
195228559Actinidia_chinensisESTVector
195208740Actinidia_chinensisESTVector
195209202Actinidia_chinensisESTVector
195229341Actinidia_chinensisESTVector
195199884Actinidia_chinensisESTVector
195217794Actinidia_chinensisESTVector
195288285Actinidia_chinensisESTVector
195289518Actinidia_chinensisESTVector
195291373Actinidia_chinensisESTVector
195226874Actinidia_chinensisESTVector
195321893Actinidia_chinensisESTVector
195323122Actinidia_chinensisESTVector
195233724Actinidia_chinensisESTVector
195235206Actinidia_chinensisESTVector
195213810Actinidia_chinensisESTVector
195247539Actinidia_chinensisESTVector
195245211Actinidia_chinensisESTVector
195246267Actinidia_chinensisESTVector
195246268Actinidia_chinensisESTVector
195247849Actinidia_chinensisESTVector
195281855Actinidia_chinensisESTVector
195249395Actinidia_chinensisESTVector
195282393Actinidia_chinensisESTVector
195249918Actinidia_chinensisESTVector
195308641Actinidia_chinensisESTVector
195308643Actinidia_chinensisESTVector
195208298Actinidia_chinensisESTVector
195208749Actinidia_chinensisESTVector
195208753Actinidia_chinensisESTVector
195262311Actinidia_chinensisESTVector
195262312Actinidia_chinensisESTVector
195211473Actinidia_chinensisESTVector
195263552Actinidia_chinensisESTVector
195271339Actinidia_chinensisESTVector
195280797Actinidia_chinensisESTVector
195282396Actinidia_chinensisESTVector
195259648Actinidia_chinensisESTVector
195208780Actinidia_chinensisESTVector

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