GRMZM2G098298_T01 - Closest Ds (RefGen_v2) ![]( "Click for Gene Distance Table Help")
[RefGen_v1] [AcDs Home]
Information about this gene: [View All Genes]
| Transcript ID: | GRMZM2G098298_T01 |
| Locus ID: | GRMZM2G098298 |
| Description: | filtered_set; ortholog; UniRef90: CYSP1_MAIZE Cysteine proteinase 1 n=3 (Andropogoneae) Exp=0; maizesequence.org: RefSeq_dna:NM_001112215; cysteine protease1 (ccp1) mRNA | RefSeq_peptide:NP_001105685; cysteine proteinase 1 precursor | UniGene:Zm.155434; Transcribed locus strongly similar to NP_001105685.1 cysteine proteinase 1 precursor [Zea mays] | UniGene:Zm.5565; Cysteine protease1 | Uniprot/SPTREMBL:B4FX40; Putative uncharacterized protein | Uniprot/SWISSPROT:Q10716; Cysteine proteinase 1 Precursor (EC 3.4.22.-) | MaizeGDB_GenBank:X82185; product:cysteine proteinase | MaizeGDB_GenBank:MZECP; product:cysteine proteinase | EntrezGene:542701; cysteine protease1 | GenBank:MZECP; product:cysteine proteinase | GO:0004197; cysteine-type endopeptidase activity | GO:0006508; proteolysis | GO:0008234; cysteine-type peptidase activity | MaizeGDB_GenBank:AY104312; |
| Gene Location: | chr5: 158865959..158869458 |
|
Closest Ds Site: |
chr5: 158863489 ( 2.5 kb from 5’ end of gene) |
| Closest Ds barcode ID: | I.S08.1682 [Order Seed] |
List of closest Ds Insertions: [View All Ds Insertions]
| Number | Ds Insertion Barcode ID |
Est. Ds Insertion Site |
Distance (kb) (in gene) |
5’ or 3’ | Gene - Ds Span |
|---|---|---|---|---|---|
| 1 | I.S08.1682 | chr5: 158863489 | 2.5 | 5 | 158863489..158869458 |
| 2 | B.W06.1366A | chr5: 161629778 | 2760.3 | 3 | 158865959..161629778 |
| 3 | I.S06.2721 | chr5: 155526496 | 3339.5 | 5 | 155526496..158869458 |
| 4 | B.S05.0374 | chr5: 162267064 | 3397.6 | 3 | 158865959..162267064 |
| 5 | I.S07.1668 | chr5: 155031953 | 3834 | 5 | 155031953..158869458 |
| 6 | B.S06.0734 | chr5: 152744510 | 6121.4 | 5 | 152744510..158869458 |
| 7 | Ac.mon00152 | chr5: 168670969 | 9801.5 | 3 | 158865959..168670969 |
| 8 | B.S08.0413A | chr5: 146847093 | 12018.9 | 5 | 146847093..158869458 |
| 9 | I.S07.4244 | chr5: 171691616 | 12822.2 | 3 | 158865959..171691616 |