GRMZM2G011789_T01 - Closest Ds (RefGen_v2) ![]( "Click for Gene Distance Table Help")
[RefGen_v1] [AcDs Home]
Information about this gene: [View All Genes]
| Transcript ID: | GRMZM2G011789_T01 |
| Locus ID: | GRMZM2G011789 |
| Description: | filtered_set; syntelog; UniRef90: Q94EJ7_MAIZE Leafy cotyledon1 n=2 (Zea mays) Exp=1e-92; maizesequence.org: MaizeGDB_GenBank:AF410176; product:leafy cotyledon1 | RefSeq_dna:NM_001112048; leafy cotyledon (lec1) mRNA | RefSeq_dna:NM_001159156; nuclear transcription factor Y subunit B-6 (LOC100286269) mRNA | RefSeq_peptide:NP_001105518; leafy cotyledon | RefSeq_peptide:NP_001152628; nuclear transcription factor Y subunit B-6 | UniGene:Zm.136441; Nuclear transcription factor Y subunit B-6 | UniGene:Zm.7340; Leafy cotyledon | Uniprot/SPTREMBL:B6UH02; Nuclear transcription factor Y subunit B-6 | Uniprot/SPTREMBL:Q94EJ7; Leafy cotyledon1 | GO:0043565; sequence-specific DNA binding | GO:0006355; regulation of transcription DNA-dependent | EntrezGene:100286269; nuclear transcription factor Y subunit B-6 | EntrezGene:542498; leafy cotyledon | GenBank:AF410176; product:leafy cotyledon1 | GO:0000786; nucleosome | GO:0003677; DNA binding | GO:0005622; intracellular | GO:0005634; nucleus | GO:0006334; nucleosome assembly |
| Gene Location: | chr5: 204332560..204333737 |
|
Closest Ds Site: |
chr5: 204546093 ( 212.4 kb from 5’ end of gene) |
| Closest Ds barcode ID: | B.S07.0216R [Order Seed] |
List of closest Ds Insertions: [View All Ds Insertions]
| Number | Ds Insertion Barcode ID |
Est. Ds Insertion Site |
Distance (kb) (in gene) |
5’ or 3’ | Gene - Ds Span |
|---|---|---|---|---|---|
| 1 | B.S07.0216R | chr5: 204546093 | 212.4 | 5 | 204332560..204546093 |
| 2 | I.S07.4199 | chr5: 203109179 | 1223.4 | 3 | 203109179..204333737 |
| 3 | I.S06.2739R | chr5: 205839796 | 1506.1 | 5 | 204332560..205839796 |
| 4 | I.S06.1884 | chr5: 206744748 | 2411 | 5 | 204332560..206744748 |
| 5 | I.S07.1594 | chr5: 206841594 | 2507.9 | 5 | 204332560..206841594 |
| 6 | I.S07.3938B | chr5: 206846842 | 2513.1 | 5 | 204332560..206846842 |
| 7 | I.S07.0855 | chr5: 206929052 | 2595.3 | 5 | 204332560..206929052 |