Datasets - Overview

See below for brief descriptions of special datasets available at PlantGDB, or click title link to navigate to the resource page.

AcDs Tagging

The AcDs Tagging project provides a collection of sequence-tagged Ds insertions in W22-derived inbred lines, for forward and reverse genetics studies in maize. PlantGDB provides a database for cataloging and placing Ds insertions with respect to the emerging maize genome. Also provided are tools for determining proximity of Ds insertions to genes of interest and a request form for ordering seed.

ASIP

The ASIP database provides data for various projects related to the study of (alternative) pre-mRNA splicing in plants.

PLEXdb

PLEXdb is a Plant Expression Database, integrating new and rapidly expanding gene expression profile data sets with traditional structural genomics and phenotypic data.

RescueMu

RescueMu catalogs and annotates RescueMu-tagged maize sequences matching GSS contigs.

RFLP-FLIS

The Maize RFLP-Full Length Insert Sequencing (RFLP-FLIS) Project provides full length insert sequence for maize RFLP markers including the CBMs (~ 90 total), and ~ 500 other markers from the UMC 98 map. In addition to being useful for the Cytogenetic Map of Maize Project, these sequence can anchor assemblies of the maize genome to the genetic and cytogenetic maps.

SRGD

The Splicing Related Gene Database (SRGD) database provides data for various projects related to the study of (alternative) pre-mRNA splicing in plants.

UniformMu

UniformMu catalogs and annotates UniformMu-tagged maize sequences matching GSS contigs.

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