Search or download any splice-aligned sequences, gene models, or genomic sequence from ZxGDB. The entire ZxGDB dataset can also be downloaded.
More about search / download...
Note: sequences displayed here may not reflect the latest Zea mays sequence count at PlantGDB, which can be viewed on our download page.
Sequence analysis tools accessed from the Genome Context View
menu use the current genomic region as input. Or, to access the same tools without a genomic context, use ZxGDB left menubar Tools links.
More about tools...
Help annotate the Zea mays
genome using our yrGATE gene structure annotation tool
aided by GAEVAL tables
that flag problematic gene models.
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Custom Track Display
Distributed Annotation Service (DAS) (see Overview
) is available for displaying remotely served genome alignments at ZxGDB, as well as for displaying selected ZxGDB tracks on a different genome browser (e.g. Ensembl, GBrowse). How to use DAS...
Additional custom track display features are under development.
Annotated protein alignments
Annotated Protein Alignments:
A searchable table
of splice-aligned, annotated protein models. TBD.
Genome browser video demo:
For help pages and tutorials focusing on genome browser features and gene annotation, see side bar.