Maize Loci/Annotations
|
Filter on; retrieved 464 records | Clear All Filters| |
Download .csv
 Subscribe
|
| Link to this page | ||||||
| Locus ID (5a.59 models) |
Gen ome |
Chr | From/To | Len (kb) |
Intron Count |
Str | # Tran |
Ds Dist (kb)  |
Locus Description (hover for complete description) |
Gene | Gene Structure Annotation Project |
Cov er age |
Inte grity |
yrGATE Anno Count |
yrGATE Anno Class |
yrGATE Gene Product | Anno Status (click to view) |
Annotate it! |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| GRMZM2G164696 | 1 | 2037790 2040079 |
2.3 | 2 | f | 3 | 121 | filtered_set; syntelog; UniRef90: TBB2_ARATH Tubulin beta-2/beta-3 chain n=... | tub1 | classical maize genes | 0.98 | 0.86 | ||||||
| GRMZM2G090568 | 1 | 7160314 7162590 |
2.3 | 5 | r | 2 | 239 | filtered_set; syntelog; UniRef90: No significant hits (1e-5); maizesequence... | cat2 | classical maize genes | 0.99 | 0.87 | ||||||
| GRMZM2G339563 | 1 | 10092334 10096672 |
4.3 | 6 | f | 1 | 442 | filtered_set; syntelog; UniRef90: O04129_MAIZE Lethal leaf-spot 1 (Fragment... | lls1 | classical maize genes | 0.99 | 1 | ||||||
| GRMZM2G092542 | 1 | 10826297 10827541 |
1.2 | 1 | r | 2 | 6 | filtered_set; syntelog; UniRef90: A5H448_MAIZE Rootless concerning crown an... | rtcs1 | classical maize genes | 1 | 0.66 | 2 |   |
LOB domain-containing protein | |||
| GRMZM2G172322 | 1 | 12987102 12993471 |
6.4 | 10 | f | 3 | 409 | filtered_set; syntelog; UniRef90: O64409_MAIZE Glutathione reductase (Fragm... | gsr1 | classical maize genes | 0.99 | 0.99 | ||||||
| GRMZM2G091822 | 1 | 14506335 14508661 |
2.3 | 4 | r | 1 | 392 | filtered_set; syntelog; UniRef90: B6TED7_MAIZE Cytochrome P450 CYP704B12v2 ... | ms26 | classical maize genes | 1 | 0.96 | ||||||
| GRMZM2G410515 | 1 | 17660941 17667054 |
6.1 | 14 | f | 2 | 526 | filtered_set; syntelog; UniRef90: CRTI_ORYSJ Phytoene dehydrogenase, chloro... | vp5 | classical maize genes | 1 | 0.97 | ||||||
| GRMZM2G155242 | 1 | 25284139 25288349 |
4.2 | 9 | f | 2 | 875 | filtered_set; syntelog; UniRef90: INO1_ORYSJ Inositol-3-phosphate synthase ... | lpa1 | classical maize genes | 0.99 | 1 | ||||||
| GRMZM2G050514 | 1 | 27977783 27981439 |
3.7 | 11 | r | 3 | -1 | filtered_set; syntelog; UniRef90: GLNA1_MAIZE Glutamine synthetase root iso... | gln6 | classical maize genes | 0.96 | 0.9 | ||||||
| GRMZM2G110309 | 1 | 40352197 40357695 |
5.5 | 9 | f | 1 | 41 | filtered_set; syntelog; UniRef90: Q43703_MAIZE Initiator-binding protein n=... | ibp2 | classical maize genes | 1 | 1 | ||||||
| GRMZM2G087186 | 1 | 45512802 45515978 |
3.2 | 5 | r | 4 | 173 | filtered_set; syntelog; UniRef90: No significant hits (1e-5); maizesequence... | pdc3 | classical maize genes | 1 | 0.96 | 1 | |
pyruvate decarboxylase | |||
| GRMZM2G455809 | 1 | 46678942 46680363 |
1.4 | 1 | f | 1 | 445 | filtered_set; syntelog; UniRef90: TS2_MAIZE Sex determination protein tasse... | ts2 | classical maize genes | 1 | 0.99 | ||||||
| GRMZM2G321753 | 1 | 47291535 47321106 |
29.6 | 30 | f | 2 | 49 | filtered_set; syntelog; UniRef90: Q6ZFZ4_ORYSJ Os02g0709400 protein n=7 (Po... | dek1 | classical maize genes | 0.65 | 0.66 | ||||||
| GRMZM2G377215 | 1 | 47504495 47507003 |
2.5 | 1 | f | 2 | 0 | filtered_set; syntelog; UniRef90: Q5YLM2_MAIZE Roothairless 3 n=2 (Andropog... | rth3 | classical maize genes | 1 | 1 | ||||||
| GRMZM2G057027 | 1 | 48092121 48097632 |
5.5 | 3 | r | 2 | 588 | filtered_set; syntelog; UniRef90: C6G8B2_MAIZE P1-WR 5 n=7 (Zea mays) Exp=7... | p2 | classical maize genes | 0.98 | 0.89 | ||||||
| GRMZM2G084799 | 1 | 48117497 48128047 |
10.6 | 2 | f | 1 | 613 | filtered_set; syntelog; UniRef90: No significant hits (1e-5); maizesequence... | p1 | classical maize genes | 1 | 0.95 | ||||||
| GRMZM2G124532 | 1 | 50025637 50036980 |
11.3 | 3 | f | 3 | 2120 | filtered_set; other; UniRef90: Q1A5Y4_MAIZE Phytochrome B1 (Fragment) n=1 (... | phyB1 | classical maize genes | 0.83 | 0.93 | ||||||
| GRMZM2G152891 | 1 | 52095395 52099196 |
3.8 | 2 | f | 3 | 58 | filtered_set; syntelog; UniRef90: No significant hits (1e-5); maizesequence... | cal3 | classical maize genes | 0.8 | 0.82 | ||||||
| GRMZM2G018728 | 1 | 52807627 52810251 |
2.6 | 4 | r | 2 | 181 | filtered_set; syntelog; UniRef90: ZB14_MAIZE 14 kDa zinc-binding protein n=... | pki1 | classical maize genes | 0.81 | 0.91 | ||||||
| GRMZM2G044074 | 1 | 56558221 56562800 |
4.6 | 7 | f | 2 | 192 | filtered_set; syntelog; UniRef90: DCUP2_ORYSJ Uroporphyrinogen decarboxylas... | les22 | classical maize genes | 0.95 | 0.89 | ||||||
| GRMZM2G169890 | 1 | 60145100 60148692 |
3.6 | 7 | f | 4 | 552 | filtered_set; syntelog; UniRef90: P93801_MAIZE Superoxide dismutase [Cu-Zn]... | sod4 | classical maize genes | 1 | 1 | ||||||
| GRMZM2G123140 | 1 | 100903698 100909663 |
6 | 10 | r | 5 | 2503 | filtered_set; syntelog; UniRef90: Q9LEE7_MAIZE OCL4 protein n=4 (Andropogon... | ocl4 | classical maize genes | 1 | 1 | ||||||
| GRMZM2G456626 | 1 | 101830081 101832342 |
2.3 | 0 | r | 1 | 1581 | filtered_set; syntelog; UniRef90: ITPK1_MAIZE Inositol-tetrakisphosphate 1-... | lpa2 | classical maize genes | 0.75 | 0.9 | ||||||
| GRMZM2G170839 | 1 | 132568513 132571279 |
2.8 | 3 | f | 2 | 5914 | filtered_set; syntelog; UniRef90: No significant hits (1e-5); maizesequence... | xyl1 | classical maize genes | 1 | 0.86 | ||||||
| GRMZM2G403620 | 1 | 154952735 154957201 |
4.5 | 1 | r | 2 | 934 | filtered_set; syntelog; UniRef90: RS2_MAIZE Protein rough sheath 2 n=2 (And... | rs2 | classical maize genes | 1 | 0.68 | 2 |  |
myb family transcription factor | |||
| GRMZM2G062788 | 1 | 158313837 158325193 |
11.4 | 3 | f | 1 | 601 | filtered_set; ortholog; UniRef90: Q9XF14_MAIZE Bundle sheath defective prot... | bsd2 | classical maize genes | 0.99 | 0.98 | ||||||
| GRMZM2G171822 | 1 | 173846756 173848499 |
1.7 | 1 | f | 1 | 3355 | filtered_set; syntelog; UniRef90: A6MW92_MAIZE Barren inflorescence2 n=1 (Z... | bif2 | classical maize genes | 0.29 | 0.17 | ||||||
| GRMZM2G080603 | 1 | 178476591 178478157 |
1.6 | 2 | r | 4 | 1242 | filtered_set; syntelog; UniRef90: C0PBL7_MAIZE Putative uncharacterized pro... | grp1 | classical maize genes | 0.75 | 0.8 | ||||||
| GRMZM2G159397 | 1 | 194013508 194021595 |
8.1 | 7 | f | 2 | -4 | filtered_set; syntelog; UniRef90: B6T6U6_MAIZE SRF-type transcription facto... | zmm6 | classical maize genes | 0.77 | 0.93 | ||||||
| GRMZM2G175423 | 1 | 197267922 197271011 |
3.1 | 2 | f | 2 | -1 | filtered_set; syntelog; UniRef90: Q0QWI2_MAIZE Sorbitol dehydrogenase n=3 (... | sdh1 | classical maize genes | 0.97 | 0.99 | ||||||
| GRMZM5G881887 | 1 | 199754467 199756329 |
1.9 | 4 | f | 2 | 250 | filtered_set; syntelog; UniRef90: No significant hits (1e-5); maizesequence... | hm1 | classical maize genes | 1 | 0.87 | ||||||
| GRMZM2G056400 | 1 | 215606266 215611664 |
5.4 | 5 | r | 1 | 165 | filtered_set; syntelog; UniRef90: B5M492_MAIZE Kanadi1 n=1 (Zea mays) Exp=0... | kan1 | classical maize genes | 1 | 1 | ||||||
| GRMZM2G078412 | 1 | 220979365 220991421 |
12.1 | 8 | r | 3 | 130 | filtered_set; syntelog; UniRef90: CRS1_MAIZE Chloroplastic group IIA intron... | crs1 | classical maize genes | 1 | 0.95 | ||||||
| GRMZM2G167824 | 1 | 225032510 225037728 |
5.2 | 6 | f | 2 | 115 | filtered_set; syntelog; UniRef90: Q7X9M6_MAIZE Yabby10 protein n=2 (Zea may... | yab10 | classical maize genes | 0.99 | 1 | ||||||
| GRMZM2G415359 | 1 | 231336185 231341950 |
5.8 | 6 | r | 3 | 62 | filtered_set; syntelog; UniRef90: MDHC_ORYSJ Malate dehydrogenase, cytoplas... | mdh4 | classical maize genes | 0.91 | 0.97 | ||||||
| GRMZM2G011357 | 1 | 239608944 239612267 |
3.3 | 3 | r | 1 | 400 | filtered_set; syntelog; UniRef90: O65215_MAIZE Zinc finger protein ID1 n=1 ... | id1 | classical maize genes | 1 | 0.98 | ||||||
| GRMZM2G081554 | 1 | 241218603 241226854 |
8.3 | 12 | f | 6 | 42 | filtered_set; syntelog; UniRef90: Q41771_MAIZE Kaurene synthase A n=1 (Zea ... | an1 | classical maize genes | 0.99 | 0.89 | ||||||
| GRMZM2G016241 | 1 | 241371943 241373296 |
1.4 | 1 | r | 2 | -1 | filtered_set; syntelog; UniRef90: GSTX2_MAIZE Probable glutathione S-transf... | bz2 | classical maize genes | 0.9 | 0.94 | ||||||
| GRMZM2G167986 | 1 | 243649093 243651434 |
2.3 | 1 | f | 2 | 1215 | filtered_set; syntelog; UniRef90: B6U102_MAIZE Cytochrome P450 CYP78A1 n=2 ... | cyp8 | classical maize genes | 1 | 0.96 | ||||||
| GRMZM2G018627 | 1 | 247758733 247760445 |
1.7 | 2 | f | 2 | 1807 | filtered_set; syntelog; UniRef90: CB23_ORYSJ Chlorophyll a-b binding protei... | lhcb9 | classical maize genes | 0.94 | 0.67 | 2 | |
chlorophyll a-b binding protein | |||
| GRMZM2G364069 | 1 | 250092343 250095992 |
3.6 | 5 | r | 1 | 233 | filtered_set; syntelog; UniRef90: Q84PD0_ORYSJ DnaJ protein n=7 (Poaceae) E... | cdj2 | classical maize genes | 0.97 | 0.99 | ||||||
| GRMZM2G014392 | 1 | 250892567 250895242 |
2.7 | 0 | r | 1 | 1033 | filtered_set; syntelog; UniRef90: NCED1_MAIZE 9-cis-epoxycarotenoid dioxyge... | vp14 | classical maize genes | 0.94 | 0.98 | ||||||
| GRMZM2G099056 | 1 | 253893686 253906936 |
13.3 | 24 | f | 1 | 1259 | filtered_set; syntelog; UniRef90: Q10GJ5_ORYSJ Roothairless 1, putative, ex... | rth1 | classical maize genes | 0.88 | 0.87 | ||||||
| GRMZM2G163761 | 1 | 256513586 256515267 |
1.7 | 3 | f | 1 | 282 | filtered_set; syntelog; UniRef90: Q8RXA9_MAIZE Knotted1-interacting protein... | kip1 | classical maize genes | 1 | 1 | ||||||
| GRMZM2G067919 | 1 | 258363413 258366718 |
3.3 | 5 | f | 2 | 1036 | filtered_set; syntelog; UniRef90: Q9ATH8_ZEADI Globulin 1 (Fragment) n=1 (Z... | glb1 | classical maize genes | 0.85 | 0.86 | ||||||
| GRMZM2G108766 | 1 | 258551317 258555376 |
4.1 | 3 | r | 3 | 1222 | filtered_set; syntelog; UniRef90: A3AL37_ORYSJ Putative uncharacterized pro... | tub3 | classical maize genes | 0.94 | 0.84 | ||||||
| GRMZM2G109130 | 1 | 264200949 264205758 |
4.8 | 6 | f | 2 | 1198 | filtered_set; syntelog; UniRef90: C9DHL2_SORBI LOX1 n=4 (Andropogoneae) Exp... | lox3 | classical maize genes | 1 | 0.97 | ||||||
| AC233950.1_FG002 | 1 | 265745979 265747712 |
1.7 | 0 | f | 1 | 1413 | filtered_set; syntelog; UniRef90: TB1_MAIZE Transcription factor TEOSINTE B... | tb1 | classical maize genes | 1 | 0.96 | ||||||
| GRMZM2G144744 | 1 | 266094769 266097836 |
3.1 | 1 | f | 3 | 1063 | filtered_set; syntelog; UniRef90: DWRF8_MAIZE DELLA protein DWARF8 n=6 (And... | d8 | classical maize genes | 0.98 | 0.77 | ||||||
| GRMZM2G024104 | 1 | 267894143 267897525 |
3.4 | 12 | r | 5 | 110 | filtered_set; syntelog; UniRef90: GLNA2_MAIZE Glutamine synthetase root iso... | gln2 | classical maize genes | 0.82 | 0.93 | ||||||
| GRMZM2G157727 | 1 | 269322348 269329351 |
7 | 5 | r | 2 | 39 | filtered_set; syntelog; UniRef90: No significant hits (1e-5); maizesequence... | phyA1 | classical maize genes | 0.92 | 0.84 | ||||||
| GRMZM2G017087 | 1 | 271340805 271348525 |
7.7 | 6 | r | 3 | 420 | filtered_set; syntelog; UniRef90: No significant hits (1e-5); maizesequence... | Kn1 | classical maize genes | 1 | 0.86 | 2 |  |
homeobox protein | |||
| GRMZM2G000743 | 1 | 271627017 271628373 |
1.4 | 2 | r | 1 | 141 | filtered_set; syntelog; UniRef90: B6TIY4_MAIZE KNOX1 domain containing prot... | knox3 | classical maize genes | 0.8 | 0.94 | ||||||
| GRMZM2G092198 | 1 | 272034519 272036983 |
2.5 | 1 | f | 1 | 266 | filtered_set; syntelog; UniRef90: C5WM09_SORBI Putative uncharacterized pro... | emp4 | classical maize genes | 1 | 0.97 | ||||||
| GRMZM2G442658 | 1 | 273983252 273987146 |
3.9 | 10 | r | 8 | 532 | filtered_set; syntelog; UniRef90: Q2R8Z1_ORYSJ Alcohol dehydrogenase 2, put... | adh1 | classical maize genes | 0.94 | 0.94 | ||||||
| GRMZM2G016671 | 1 | 276329889 276362808 |
32.9 | 16 | r | 6 | 5 | filtered_set; syntelog; UniRef90: Q6RK06_MAIZE Tousled-like kinase 2 n=4 (A... | tlk1 | classical maize genes | 0.88 | 0.75 | ||||||
| GRMZM2G057935 | 1 | 276992819 276997822 |
5 | 3 | r | 1 | 352 | filtered_set; syntelog; UniRef90: PHYC_SORBI Phytochrome C n=12 (Andropogon... | phyC1 | classical maize genes | 0.93 | 0.98 | ||||||
| GRMZM2G087095 | 1 | 277310667 277348765 |
38.1 | 7 | r | 2 | 1 | filtered_set; syntelog; UniRef90: B4XAV3_MAIZE MADS-box transcription facto... | zmm24 | classical maize genes | 0.99 | 0.96 | ||||||
| GRMZM2G090422 | 1 | 277739114 277741150 |
2 | 3 | f | 2 | 390 | filtered_set; syntelog; UniRef90: Q75J18_ORYSJ Os03g0756000 protein n=11 (P... | mta1 | classical maize genes | 0.96 | 0.85 | ||||||
| GRMZM2G047855 | 1 | 279418287 279424292 |
6 | 9 | r | 1 | 474 | filtered_set; syntelog; UniRef90: B6F107_ORYSJ Casein kinase II alpha subun... | cka2 | classical maize genes | 1 | 0.99 | ||||||
| AC234157.1_FG002 | 1 | 281107354 281109091 |
1.7 | 1 | r | 1 | 221 | filtered_set; syntelog; UniRef90: B6TQC6_MAIZE 30S ribosomal protein S9 n=5... | lem1 | classical maize genes | 1 | 0.9 | ||||||
| GRMZM2G010353 | 1 | 286319225 286327417 |
8.2 | 9 | f | 2 | 2213 | filtered_set; syntelog; UniRef90: No significant hits (1e-5); maizesequence... | vp8 | classical maize genes | 0.98 | 0.83 | ||||||
| GRMZM2G026703 | 1 | 287062939 287065014 |
2.1 | 3 | r | 1 | 1677 | filtered_set; syntelog; UniRef90: B6UGJ0_MAIZE Globulin-1 S allele n=2 (Zea... | glb2 | classical maize genes | 0.97 | 0.96 | ||||||
| GRMZM2G178415 | 1 | 287289676 287296815 |
7.1 | 9 | r | 6 | 1445 | filtered_set; syntelog; UniRef90: No significant hits (1e-5)... | gdh1 | classical maize genes | 0.88 | 0.95 | ||||||
| GRMZM2G016150 | 1 | 288207521 288212296 |
4.8 | 5 | r | 1 | 530 | filtered_set; syntelog; UniRef90: Q03462_MAIZE Opaque2 heterodimerizing pro... | ohp1 | classical maize genes | 0.94 | 0.98 | ||||||
| GRMZM2G046191 | 1 | 288261016 288266253 |
5.2 | 7 | r | 5 | 476 | filtered_set; syntelog; UniRef90: Q9FQ76_MAIZE Putative tryptophan synthase... | igl1 | classical maize genes | 0.99 | 0.93 | ||||||
| GRMZM2G111642 | 1 | 290593939 290599907 |
6 | 14 | r | 4 | 1473 | filtered_set; ortholog; UniRef90: C5WW43_SORBI Putative uncharacterized pro... | cesa5 | classical maize genes | 0.93 | 0.98 | ||||||
| GRMZM5G862109 | 1 | 292889740 292893983 |
4.2 | 9 | f | 3 | 140 | filtered_set; syntelog; UniRef90: No significant hits (1e-5); maizesequence... | ts6 | classical maize genes | 1 | 1 | ||||||
| GRMZM2G155329 | 1 | 293041177 293042705 |
1.5 | 3 | r | 2 | 8 | filtered_set; syntelog; UniRef90: CFI_MAIZE Chalcone--flavonone isomerase n... | chi1 | classical maize genes | 1 | 0.99 | ||||||
| GRMZM2G053458 | 1 | 296017136 296022027 |
4.9 | 2 | f | 3 | 573 | filtered_set; other; UniRef90: No significant hits (1e-5); maizesequence.or... | fdx3 | classical maize genes | 0.74 | 0.81 | ||||||
| GRMZM2G113137 | 1 | 296254082 296259864 |
5.8 | 13 | f | 1 | 810 | filtered_set; syntelog; UniRef90: CESA5_ORYSJ Probable cellulose synthase A... | cesa6 | classical maize genes | 1 | 1 | ||||||
| GRMZM2G035017 | 1 | 296874949 296877709 |
2.8 | 4 | r | 1 | 1395 | filtered_set; syntelog; UniRef90: RS4_ORYSJ 40S ribosomal protein S4 n=13 (... | rps4 | classical maize genes | 0.97 | 0.98 | 1 | |
40S ribosomal protein S4 | |||
| GRMZM2G062396 | 2 | 3556786 3558729 |
1.9 | 2 | f | 1 | 39 | filtered_set; syntelog; UniRef90: Q43262_MAIZE Flavanone 3-beta-hydroxylase... | fht1 | classical maize genes | 0.96 | 0.97 | ||||||
| GRMZM2G036297 | 2 | 4259524 4263201 |
3.7 | 2 | r | 1 | -0 | filtered_set; syntelog; UniRef90: LG1_MAIZE Protein LIGULELESS 1 n=2 (Zea m... | lg1 | classical maize genes | 0.88 | 0.96 | ||||||
| GRMZM2G019404 | 2 | 4299718 4307332 |
7.6 | 14 | r | 2 | 37 | filtered_set; syntelog; UniRef90: PMA1_ORYSJ Plasma membrane ATPase n=10 (P... | mha2 | classical maize genes | 0.97 | 0.97 | ||||||
| GRMZM2G098239 | 2 | 10624501 10627540 |
3 | 1 | r | 3 | 242 | filtered_set; syntelog; UniRef90: Q41809_MAIZE Orf protein n=2 (Andropogone... | gl2 | classical maize genes | 1 | 0.99 | ||||||
| GRMZM2G180190 | 2 | 12641797 12644804 |
3 | 2 | r | 1 | 154 | filtered_set; syntelog; UniRef90: Q5Q1I9_ZEAMP Floricaula/leafy-like 2 n=24... | zfl2 | classical maize genes | 0.94 | 0.97 | ||||||
| GRMZM2G172795 | 2 | 18417370 18421827 |
4.5 | 5 | f | 1 | 69 | filtered_set; syntelog; UniRef90: Q8S470_MAIZE Regulatory protein n=1 (Zea ... | b1 | classical maize genes | 0.92 | 0.86 | ||||||
| GRMZM2G337229 | 2 | 20765568 20767537 |
2 | 1 | f | 1 | 192 | filtered_set; syntelog; UniRef90: B6UGS3_MAIZE Oleosin n=1 (Zea mays) Exp=1... | ole1 | classical maize genes | 0.89 | 0.36 | ||||||
| GRMZM2G394450 | 2 | 22880766 22885337 |
4.6 | 6 | r | 1 | 176 | filtered_set; syntelog; UniRef90: INV1_MAIZE Beta-fructofuranosidase 1 n=2 ... | ivr1 | classical maize genes | 1 | 1 | ||||||
| GRMZM2G035688 | 2 | 27478703 27483682 |
5 | 6 | r | 2 | 378 | filtered_set; syntelog; UniRef90: Q9FXQ7_MAIZE Response regulator n=2 (Andr... | abph1 | classical maize genes | 0.8 | 0.7 | ||||||
| GRMZM2G178693 | 2 | 27867805 27870068 |
2.3 | 2 | r | 1 | -1 | filtered_set; syntelog; UniRef90: PIP24_MAIZE Aquaporin PIP2-4 n=9 (Poaceae... | pip2a | classical maize genes | 0.98 | 0.96 | ||||||
| GRMZM2G154397 | 2 | 32491968 32495438 |
3.5 | 3 | r | 4 | 456 | filtered_set; syntelog; UniRef90: No significant hits (1e-5); maizesequence... | sam2 | classical maize genes | 0.92 | 0.85 | ||||||
| GRMZM2G051943 | 2 | 33534101 33535449 |
1.3 | 1 | f | 1 | 530 | filtered_set; syntelog; UniRef90: CHIA_MAIZE Endochitinase A n=73 (Andropog... | cta1 | classical maize genes | 0.95 | 0.96 | ||||||
| GRMZM2G042443 | 2 | 40502579 40508183 |
5.6 | 3 | r | 2 | 435 | filtered_set; syntelog; UniRef90: Q19VG2_MAIZE RNA-dependent RNA polymerase... | mop1 | classical maize genes | 0.89 | 0.92 | ||||||
| GRMZM2G102356 | 2 | 40588194 40589174 |
1 | 1 | r | 2 | 520 | filtered_set; syntelog; UniRef90: Q19VG6_MAIZE Major latex protein 22 n=3 (... | prp2 | classical maize genes | 0.94 | 0.89 | ||||||
| GRMZM2G102499 | 2 | 41302953 41306867 |
3.9 | 5 | r | 4 | 178 | filtered_set; syntelog; UniRef90: 14332_ORYSJ 14-3-3-like protein GF14-B n=... | grf1 | classical maize genes | 1 | 0.95 | ||||||
| GRMZM2G337113 | 2 | 42257261 42259297 |
2 | 3 | r | 3 | 166 | filtered_set; ortholog; UniRef90: G3PA_MAIZE Glyceraldehyde-3-phosphate deh... | gpa1 | classical maize genes | 1 | 0.98 | ||||||
| GRMZM2G104843 | 2 | 45192092 45196460 |
4.4 | 6 | r | 2 | -2 | filtered_set; syntelog; UniRef90: A1XCI3_MAIZE Lipoxygenase n=1 (Zea mays) ... | ts1 | classical maize genes | 0.97 | 0.99 | ||||||
| GRMZM2G086971 | 2 | 47111123 47117012 |
5.9 | 17 | r | 9 | -1 | filtered_set; syntelog; UniRef90: No significant hits (1e-5); maizesequence... | ypt1 | classical maize genes | 1.13 | 1.03 | ||||||
| GRMZM2G168651 | 2 | 54763050 54764823 |
1.8 | 1 | r | 1 | 3525 | filtered_set; ortholog; possible_transposon; UniRef90: No significant hits ... | hrg1 | classical maize genes | 1 | 0.97 | ||||||
| GRMZM2G119689 | 2 | 56806976 56810257 |
3.3 | 6 | f | 3 | 3264 | filtered_set; syntelog; UniRef90: B6UD65_MAIZE Beta-fructofuranosidase, ins... | mn1 | classical maize genes | 0.97 | 0.99 | ||||||
| GRMZM2G075081 | 2 | 57743289 57745304 |
2 | 3 | f | 2 | 2329 | filtered_set; syntelog; UniRef90: A8WER6_MAIZE ZCN4 n=5 (Andropogoneae) Exp... | zcn4 | classical maize genes | 0.99 | 0.98 | ||||||
| GRMZM2G073054 | 2 | 58586007 58596234 |
10.2 | 21 | f | 2 | 1478 | filtered_set; syntelog; UniRef90: O24421_MAIZE Starch branching enzyme IIa ... | sbe3 | classical maize genes | 0.99 | 0.98 | ||||||
| GRMZM5G898735 | 2 | 65182701 65189244 |
6.5 | 5 | f | 2 | 1223 | filtered_set; syntelog; UniRef90: No significant hits (1e-5); maizesequence... | hcf106 | classical maize genes | 0.87 | 0.93 | ||||||
| GRMZM5G858094 | 2 | 82394515 82407013 |
12.5 | 32 | f | 2 | 3897 | filtered_set; syntelog; UniRef90: No significant hits (1e-5); maizesequence... | acc1 | classical maize genes | 1 | 0.96 | ||||||
| GRMZM2G075215 | 2 | 119661036 119662735 |
1.7 | 3 | f | 1 | 5850 | filtered_set; ortholog; UniRef90: A8WES8_MAIZE ZCN17 n=3 (Andropogoneae) Ex... | zcn17 | classical maize genes | 0.93 | 0.91 | ||||||
| GRMZM2G085924 | 2 | 127092912 127094499 |
1.6 | 1 | r | 1 | 1104 | filtered_set; ortholog; UniRef90: B6UD26_MAIZE O-methyltransferase ZRP4 n=2... | hsbp1 | classical maize genes | 0.94 | 0.95 | ||||||
| GRMZM2G069028 | 2 | 142531613 142533651 |
2 | 2 | f | 3 | 1642 | filtered_set; syntelog; UniRef90: WOX3A_MAIZE WUSCHEL-related homeobox 3A n... | ns1 | classical maize genes | 0.97 | 0.66 | 1 | |
Homeobox domain containing protein | |||
| GRMZM2G113033 | 2 | 142794871 142796060 |
1.2 | 1 | f | 2 | 1905 | filtered_set; syntelog; UniRef90: RBS_MAIZE Ribulose bisphosphate carboxyla... | ssu2 | classical maize genes | 0.9 | 0.97 |