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Protein Alignment Table for Zea mays

RefGen_v1/ZmGDB171 (15 April 2009)

Show only fDs Matches

(search examples: 2 , contig1 , AC177838 , LOC_Os07g49230.1 , Sb0010s003440.1 , B.S05.0392_JSR01 , GRMZM2G399700_T01 )

[ Export search result ] [ << Prev ][ Next >> ] (Showing 1 - 100 of 167885 records / 11 Chromosomes)

ZmGDB	CoGe	Chr	FPC Contig	BAC Accn	fDs Clone	Rice/Sorghum Protein/Maize Gene ID	Start position	End position	Protein/Gene Description	Arabidopsis blast hit	Evalue
ZmGDB	CoGe	Chr	FPC Contig	BAC Accn	fDs Clone	Rice/Sorghum Protein/Maize Gene ID	Start position	End position	Protein/Gene Description	Arabidopsis blast hit	Evalue
		1	contig1	AC177838.2		Sb02g032730.1	3	1963	PF02536 PTHR13068 KOG1267 AT1G78930.1 mitochondrial transcription termination factor-related / mTERF-related
		1	contig1	AC177838.2		GRMZM2G060082_T01	3	3807	UniRef90 blastp 11-8-2010: No significant hits (1e-5)
		1	contig1	AC177838.2		GRMZM2G059865_T01	4854	9652	UniRef90 blastp 11-8-2010: C0P8I2_MAIZE Putative uncharacterized protein n=1 (Zea mays) Exp=0
		1	contig1	AC177838.2		GRMZM2G059856_T01	9856	10388	UniRef90 blastp 11-8-2010: No significant hits (1e-5)
		1	contig1	AC177838.2		GRMZM5G866996_T01	46228	47746	UniRef90 blastp 11-8-2010: No significant hits (1e-5)
		1	contig1	AC177838.2		GRMZM2G059818_T01	50453	56348	UniRef90 blastp 11-8-2010: No significant hits (1e-5)
		1	contig1	AC177838.2		GRMZM2G518629_T01	62321	62588	UniRef90 blastp 11-8-2010: No significant hits (1e-5)
		1	contig1	AC177838.2		GRMZM5G811273_T01	62734	64014	UniRef90 blastp 11-8-2010: No significant hits (1e-5)
		1	contig1	AC177838.2		Sb05g016770.1	65654	68616		AT1G54430.1	4e-180
		1	contig1	AC177838.2		AC177838.2_FGT002	70595	71919	UniRef90 blastp 11-8-2010: No significant hits (1e-5)
		1	contig1	AC177838.2		GRMZM2G518627_T01	73840	74024	UniRef90 blastp 11-8-2010: No significant hits (1e-5)
		1	contig1	AC177838.2		GRMZM2G059778_T01	76120	76752	UniRef90 blastp 11-8-2010: No significant hits (1e-5)
		1	contig1	AC177838.2		GRMZM2G518609_T01	90685	90815	UniRef90 blastp 11-8-2010: No significant hits (1e-5)
		1	contig1	AC177838.2		GRMZM2G059745_T01	92354	93541	UniRef90 blastp 11-8-2010: No significant hits (1e-5)
		1	contig1	AC177838.2		GRMZM2G093344_T01	109519	111769	UniRef90 blastp 11-8-2010: No significant hits (1e-5)
		1	contig1	AC177838.2		Sb09g001135.1	113222	114727		ATMG00820.1	7e-24
		1	contig1	AC177838.2		GRMZM2G093399_T01	136307	138929	UniRef90 blastp 11-8-2010: No significant hits (1e-5)
		1	contig1	AC177838.2		AC177838.2_FGT009	136310	136555	UniRef90 blastp 11-8-2010: No significant hits (1e-5)
		1	contig1	AC177838.2		GRMZM5G809743_T01	144361	144657	UniRef90 blastp 11-8-2010: No significant hits (1e-5)
		1	contig1	AC177838.2		GRMZM5G833153_T01	144957	145646	UniRef90 blastp 11-8-2010: No significant hits (1e-5)
		1	contig1	AC177838.2		GRMZM2G306216_T01	146265	147500	UniRef90 blastp 11-8-2010: No significant hits (1e-5)
		1	contig1	AC177838.2		AC177838.2_FGT012	150550	150900	UniRef90 blastp 11-8-2010: No significant hits (1e-5)
		1	contig1	AC177838.2		GRMZM2G006125_T01	152711	152926	UniRef90 blastp 11-8-2010: No significant hits (1e-5)
		1	contig1	AC177838.2		AC177838.2_FGT013	154434	154905	UniRef90 blastp 11-8-2010: No significant hits (1e-5)
		1	contig1	AC177838.2		GRMZM2G006128_T01	156330	159936	UniRef90 blastp 11-8-2010: No significant hits (1e-5)
		1	contig1	AC177838.2		LOC_Os07g22930.4	156767	158965	LOC_Os07g22930.4\|13107.m02249\|protein starch synthase, putative, expressed	AT1G32900.1	0.0
		1	contig1	AC177838.2		AC177838.2_FGT015	161143	161925	UniRef90 blastp 11-8-2010: No significant hits (1e-5)
		1	contig1	AC177838.2		GRMZM2G006368_T01	161672	162510	UniRef90 blastp 11-8-2010: No significant hits (1e-5)
		1	contig1	AC177838.2		GRMZM2G006376_T01	163371	165714	UniRef90 blastp 11-8-2010: No significant hits (1e-5)
		1	contig1	AC177838.2		AC177838.2_FGT017	167330	167866	UniRef90 blastp 11-8-2010: No significant hits (1e-5)
		1	contig1	AC177838.2		GRMZM2G486305_T01	169704	169808	UniRef90 blastp 11-8-2010: No significant hits (1e-5)
		1	contig1	AC177838.2		GRMZM2G486315_T01	170013	170325	UniRef90 blastp 11-8-2010: No significant hits (1e-5)
		1	contig1	AC177838.2		AC177838.2_FGT018	172313	174207	UniRef90 blastp 11-8-2010: No significant hits (1e-5)
		1	contig1	AC177838.2		Sb02g018573.1	174706	188084		AT1G64410.1	4e-38
		1	contig1	AC177838.2		Sb07g021740.1	175357	190463	PF05970 PTHR10492 KOG0987 3.6.1.- K01529 AT5G28780.1 unknown protein	AT1G54430.1	0.0
		1	contig1	AC177838.2		Sb01g026320.1	175402	190315		AT1G54430.1	0.0
		1	contig1	AC177838.2		Sb07g008840.1	175459	190283		AT1G54430.1	0.0
		1	contig1	AC177838.2		Sb03g026800.1	188075	190154		AT1G54430.1	6e-131
		1	contig1	AC177838.2		Sb06g004540.1	189618	189920	PTHR10492 AT5G28780.1 unknown protein
		1	contig1	AC177838.2		GRMZM2G400047_T01	211845	212993	UniRef90 blastp 11-8-2010: No significant hits (1e-5)
		1	contig1	AC177838.2		GRMZM2G542340_T01	215044	215371	UniRef90 blastp 11-8-2010: No significant hits (1e-5)
		1	contig1	AC177838.2		GRMZM2G542335_T01	229838	229931	UniRef90 blastp 11-8-2010: No significant hits (1e-5)
		1	contig1	AC177838.2		GRMZM2G104572_T01	234779	235890	UniRef90 blastp 11-8-2010: No significant hits (1e-5)
		1	contig1	AC177838.2	fDs ID:I.W06.0278_JSR05		237474	239176	Ds transposon flanking sequence (fDs)
		1	contig1	AC177838.2	fDs ID:I.W06.0161_JSR05		237474	239176	Ds transposon flanking sequence (fDs)
		1	contig1	AC177838.2	fDs ID:I.W06.0221_JSR05		237474	239176	Ds transposon flanking sequence (fDs)
		1	contig1	AC177838.2	fDs ID:I.S06.0553_JSR05		237474	239176	Ds transposon flanking sequence (fDs)
		1	contig1	AC177838.2		GRMZM5G837673_T01	240523	240838	UniRef90 blastp 11-8-2010: No significant hits (1e-5)
		1	contig1	AC177838.2		GRMZM2G104553_T01	241969	242811	UniRef90 blastp 11-8-2010: No significant hits (1e-5)
		1	contig1	AC177838.2		LOC_Os12g33958.1	242035	253093	LOC_Os12g33958.1\|13112.m08806\|protein NADH-ubiquinone oxidoreductase 49 kDa subunit, putative
		1	contig1	AC177838.2		GRMZM2G104491_T01	243076	245953	UniRef90 blastp 11-8-2010: No significant hits (1e-5)
		1	contig1	AC177838.2		GRMZM2G023647_T01	250166	253890	UniRef90 blastp 11-8-2010: No significant hits (1e-5)
		1	contig1	AC177838.2		GRMZM5G815900_T01	257026	257371	UniRef90 blastp 11-8-2010: No significant hits (1e-5)
		1	contig1	AC177838.2		GRMZM2G493774_T01	261289	261390	UniRef90 blastp 11-8-2010: No significant hits (1e-5)
		1	contig1	AC177838.2		GRMZM2G023794_T01	264626	265087	UniRef90 blastp 11-8-2010: B6TUT6_MAIZE Putative uncharacterized protein n=1 (Zea mays) Exp=2e-28
		1	contig1	AC177838.2		GRMZM2G023805_T01	265304	266626	UniRef90 blastp 11-8-2010: No significant hits (1e-5)
		1	contig1	AC177838.2		LOC_Os01g66970.4	267004	268298	LOC_Os01g66970.4\|13101.m07260\|protein zinc finger, C3HC4 type domain containing protein, expressed	AT2G02960.3	1e-20
		1	contig1	AC177838.2		GRMZM2G023863_T01	272525	274251	UniRef90 blastp 11-8-2010: No significant hits (1e-5)
		1	contig1	AC177838.2		GRMZM2G023888_T01	277281	277919	UniRef90 blastp 11-8-2010: No significant hits (1e-5)
		1	contig1	AC177838.2		GRMZM2G131672_T01	328341	328602	UniRef90 blastp 11-8-2010: No significant hits (1e-5)
		1	contig1	AC177838.2		GRMZM2G560476_T01	330503	330853	UniRef90 blastp 11-8-2010: No significant hits (1e-5)
		1	contig1	AC177838.2		GRMZM2G560484_T01	331755	332111	UniRef90 blastp 11-8-2010: No significant hits (1e-5)
		1	contig1	AC177838.2		GRMZM2G581519_T01	358348	358453	UniRef90 blastp 11-8-2010: No significant hits (1e-5)
		1	contig1	AC177838.2		GRMZM2G581526_T01	358845	358960	UniRef90 blastp 11-8-2010: No significant hits (1e-5)
		1	contig1	AC177838.2		GRMZM2G581550_T01	363806	363940	UniRef90 blastp 11-8-2010: No significant hits (1e-5)
		1	contig1	AC177838.2		LOC_Os05g22840.1	367468	368172	LOC_Os05g22840.1\|13105.m02311\|protein conserved hypothetical protein	AT5G24350.1	2.7
		1	contig1	AC177838.2		LOC_Os01g57968.1	367810	368172	LOC_Os01g57968.1\|13101.m14919\|protein expressed protein
		1	contig1	AC177838.2		Sb03g020186.1	368002	368172
		1	contig1	AC177838.2		Sb03g039445.1	368029	368172
		1	contig1	AC177838.2		GRMZM2G137648_T01	371975	375908	UniRef90 blastp 11-8-2010: NU5C_SORBI NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic n=216 (Poaceae) Exp=0
		1	contig1	AC177838.2		LOC_Os10g21388.1	373006	373194	LOC_Os10g21388.1\|13110.m07727\|protein expressed protein
		1	contig1	AC177838.2		LOC_Os04g16726.1	373006	373194	LOC_Os04g16726.1\|13104.m11805\|protein expressed protein
		1	contig1	AC177838.2		LOC_Os04g16728.1	373625	373894	LOC_Os04g16728.1\|13104.m11806\|protein chloroplast 30S ribosomal protein S15, putative
		1	contig1	AC177838.2		Sb03g020227.1	373658	373813
		1	contig1	AC177838.2		LOC_Os10g21418.1	374003	376207	LOC_Os10g21418.1\|13110.m07736\|protein NADPH-dependent oxidoreductase, putative
		1	contig1	AC177838.2		GRMZM2G408834_T01	379244	385788	UniRef90 blastp 11-8-2010: No significant hits (1e-5)
		1	contig1	AC177838.2		GRMZM2G108663_T01	423621	424483	UniRef90 blastp 11-8-2010: No significant hits (1e-5)
		1	contig1	AC177838.2		GRMZM2G471824_T01	458189	459763	UniRef90 blastp 11-8-2010: No significant hits (1e-5)
		1	contig1	AC177838.2		AC204887.4_FGT003	458334	458906	UniRef90 blastp 11-8-2010: No significant hits (1e-5)
		1	contig1	AC177838.2		Sb01g050690.1	514828	516012	PF00156 PTHR10210 KOG1448 2.7.6.1 K00948 AT2G44530.1 ribose-phosphate pyrophosphokinase, putative / phosphoribosyl diphosphate synthetase, putative	AT2G44530.1	7e-144
		1	contig1	AC177838.2		GRMZM2G330436_T01	515997	518953	UniRef90 blastp 11-8-2010: B6T848_MAIZE Putative uncharacterized protein n=1 (Zea mays) Exp=3e-46
		1	contig1	AC177838.2		Sb01g050680.1	516219	526785	PF09402 AT5G46560.1 unknown protein	AT5G46560.1	4e-51
		1	contig1	AC177838.2		Sb01g029385.1	522799	523723		AT5G33406.1	9e-36
		1	contig1	AC177838.2		GRMZM2G500797_T01	525775	526003	UniRef90 blastp 11-8-2010: No significant hits (1e-5)
		1	contig1	AC177838.2	fDs ID:B.S05.0392_JSR01	fDs Match:GRMZM2G032104_T01	643933	645635	fDs Match: UniRef90 blastp 11-8-2010: No significant hits (1e-5)
		1	contig1	AC177838.2	fDs ID:B.S05.0392_Lc18_JSR01_dir	fDs Match:GRMZM2G032104_T01	643933	646203	fDs Match: >GRMZM2G032104_T01 seq=cds; coord=1:644608..652093:-1; parent_gene=GRMZM2G032104
		1	contig1	AC177838.2		GRMZM2G032104_T01	644608	652093	UniRef90 blastp 11-8-2010: No significant hits (1e-5)
		1	contig1	AC177838.2		Sb01g050660.1	645674	682616	PF00588 PTHR12029:SF4 KOG0839 AT4G17610.1 tRNA/rRNA methyltransferase (SpoU) family protein	AT4G17610.1	0.0
		1	contig1	AC177838.2		GRMZM2G174870_T01	662356	664190	UniRef90 blastp 11-8-2010: No significant hits (1e-5)
		1	contig1	AC177838.2		GRMZM2G399700_T01	676952	682616	UniRef90 blastp 11-8-2010: C5WNP5_SORBI Putative uncharacterized protein Sb01g050660 n=1 (Sorghum bicolor) Exp=0
		1	contig1	AC177838.2		AC206949.3_FGT004	712507	712959	UniRef90 blastp 11-8-2010: No significant hits (1e-5)
		1	contig1	AC177838.2		GRMZM2G703460_T01	724193	724645	UniRef90 blastp 11-8-2010: No significant hits (1e-5)
		1	contig1	AC177838.2		GRMZM2G474694_T01	833249	837343	UniRef90 blastp 11-8-2010: No significant hits (1e-5)
		1	contig1	AC177838.2		Sb01g050620.1	982320	993082	PF00690,PF00122,PF00702 PTHR11939 KOG0205 3.6.3.6 K01535 AT3G60330.1 AHA7 AHA7 (Arabidopsis H(+)-ATPase 7); hydrogen-exporting ATPase, phosphorylative mechanism	AT5G62670.1	0.0
		1	contig1	AC177838.2		LOC_Os03g01120.1	982517	993082	LOC_Os03g01120.1\|13103.m00013\|protein E1-E2 ATPase domain containing protein, expressed	AT5G62670.1	0.0
		1	contig1	AC177838.2		GRMZM2G172177_T01	985262	985416	UniRef90 blastp 11-8-2010: No significant hits (1e-5)
		1	contig1	AC177838.2		GRMZM2G172183_T01	985531	993246	UniRef90 blastp 11-8-2010: C5WNP1_SORBI Putative uncharacterized protein Sb01g050620 n=1 (Sorghum bicolor) Exp=1e-41
		1	contig1	AC177838.2		AC191595.3_FGT002	994576	995451	UniRef90 blastp 11-8-2010: No significant hits (1e-5)
		1	contig1	AC177838.2		GRMZM2G374755_T01	996510	997205	UniRef90 blastp 11-8-2010: No significant hits (1e-5)
		1	contig1	AC177838.2		GRMZM2G073979_T01	997214	999824	UniRef90 blastp 11-8-2010: B4FKS4_MAIZE EREBP-4 like protein n=2 (Andropogoneae) Exp=1e-116

Database lookup time: 0.00268 seconds

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