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MtGDB Downloads

MtGDB encompasses primary sequence data, including the most current genomic sequence, EST and cDNA sequences from GenBank, EST assemblies (PUTs) from PlantGDB, and microarray probes. The mapping of cDNA and EST sequences onto the genome as well as interpretations of the overall data are based on our own spliced alignment results.

The links below, mirrored on our FTP site, provide bzip2 archives of primary sequence used in the current version of MtGDB, as well as the MySQL tables that comprise the spliced alignment data and coordinates for all aligned sequences. For more information on the current datasets, their sources, and alignment methods, go to our Data & Methods page.

The barrel medic genome assembly is still being refined and completed. MtGDB attempts to remain synchronized with the most recent release of the genome sequence or assembly (if any) and annotations. If you have any questions or comments about this genome browser, please make use of our feedback form.

NameLast modified dateFile Size
ATpep.bz2 Nov 8 2010 7.92 MB
GMpep.bz2 Nov 8 2010 12.57 MB
MTput.bz2 Nov 8 2010 12.29 MB
Medicago_truncatula.mRNA.CDNA.fasta.bz2 Feb 22 2012 1.11 MB
Medicago_truncatula.mRNA.EST.fasta.bz2 Feb 22 2012 40.18 MB
Mt3.5.1_pseudomolecules.tar.bz2 Jun 9 2010 70.69 MB
Mt3.5v3_annotation_files.tar.bz2 Feb 22 2012 68.71 MB
/previous_version directory


NOTE: For convenient batch download of MtGDB data files, visit our FTP site

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