• Anonymous
  • Login

Search:  Display ?

Segment ID:  Start:  End:

MgGDB Annotated Protein Alignments

This table organizes splice-aligned proteins and their functional annotations, in linear order according to their start/end coordinates on a genomic segment. These alignments do not necessarily represent functional genes, and some genes will lack protein alignments. The search examples demonstrate how to search by Scaffold/BAC ID, Protein ID, or keyword. Click a Scaffold/BAC ID, Protein ID, Description, or Date to filter results according to that value. Click the GDB icon in column 1 to open a new window displaying the corresponding genomic region in Genome Context View. For more information, visit PlantGDB Help.

           
(search examples: 1; Medtr2g096490.1; Triacylglycerol Lip*) [ Export search result ] [ << Prev ][ Next >> ] (Showing 1 - 100 of 5904 records / 317 BACs/Scaffolds)
GDB CoGe Scaffold/BAC ID Splice-Aligned Protein ID Start position End position Description Date
GDB CoGe Scaffold/BAC ID Splice-Aligned Protein ID Start position End position Description Date
Genome Context View View with CoGe MgScaffold1 Medtr4g159740.1 34396 38816 Malic oxidoreductase chr04_pseudomolecule_IMGAG_V3 40357761-40362476 E EGN_Mt090430 20090702 2010-11-05
Genome Context View View with CoGe MgScaffold1 Medtr2g121640.1 116095 121235 WD40-like chr02_pseudomolecule_IMGAG_V3 28903505-28910946 E EGN_Mt090430 20090702 2010-11-05
Genome Context View View with CoGe MgScaffold1 AT1G17720.1 116104 121235 ATB BETA; nucleotide binding / protein phosphatase type 2A regulator | chr1:6093949-6098065 REVERSE 2010-11-05
Genome Context View View with CoGe MgScaffold1 Medtr4g042060.1 167699 168544 Nonaspanin (TM9SF) chr04_pseudomolecule_IMGAG_V3 10066892-10065598 E EGN_Mt090430 20090702 2010-11-05
Genome Context View View with CoGe MgScaffold1 AT3G13772.1 167699 170503 endomembrane protein 70, putative | chr3:4521712-4524394 REVERSE 2010-11-05
Genome Context View View with CoGe MgScaffold1 AT1G55130.1 167699 170319 endomembrane protein 70, putative | chr1:20569654-20572266 FORWARD 2010-11-05
Genome Context View View with CoGe MgScaffold1 Medtr8g021360.1 247316 249259 Helicase, C-terminal; ; chr08_pseudomolecule_IMGAG_V3 3936106-3931642 E EGN_Mt090430 20090702 2010-11-05
Genome Context View View with CoGe MgScaffold1 Medtr2g046570.1 247316 249259 Helicase, C-terminal; ; chr02_pseudomolecule_IMGAG_V3 13072954-13068845 E EGN_Mt090430 20090702 2010-11-05
Genome Context View View with CoGe MgScaffold1 Medtr2g120800.1 247316 249259 Helicase, C-terminal; ; chr02_pseudomolecule_IMGAG_V3 28499451-28502924 E EGN_Mt090430 20090702 2010-11-05
Genome Context View View with CoGe MgScaffold1 AT3G13920.1 247316 249259 EIF4A1 (EUKARYOTIC TRANSLATION INITIATION FACTOR 4A1); ATP-dependent helicase/ translation initiation 2010-11-05
Genome Context View View with CoGe MgScaffold1 AT1G54270.1 247316 249259 EIF4A-2; ATP-dependent helicase/ translation initiation factor | chr1:20260495-20262018 FORWARD 2010-11-05
Genome Context View View with CoGe MgScaffold1 AT1G72730.1 247316 249157 eukaryotic translation initiation factor 4A, putative / eIF-4A, putative | chr1:27378040-27379593 REVERSE 2010-11-05
Genome Context View View with CoGe MgScaffold1 AT1G17370.1 410417 414740 UBP1B (oligouridylate binding protein 1B); mRNA 3'-UTR binding | chr1:5951842-5954825 REVERSE 2010-11-05
Genome Context View View with CoGe MgScaffold1 Medtr8g025650.1 411968 414740 RNA-binding region RNP-1 (RNA recognition motif) chr08_pseudomolecule_IMGAG_V3 5261567-5257902 E EGN_Mt090430 2010-11-05
Genome Context View View with CoGe MgScaffold1 Medtr8g025760.1 428439 430222 Synaptobrevin chr08_pseudomolecule_IMGAG_V3 5323064-5329845 F EGN_Mt090430 20090702 2010-11-05
Genome Context View View with CoGe MgScaffold1 AT1G11890.1 428439 430222 SEC22; transporter | chr1:4011509-4012835 FORWARD 2010-11-05
Genome Context View View with CoGe MgScaffold1 Medtr8g026500.1 478970 480282 Initiation factor 2B related chr08_pseudomolecule_IMGAG_V3 5700469-5698010 E EGN_Mt090430 20090702 2010-11-05
Genome Context View View with CoGe MgScaffold1 AT3G14290.1 498608 501197 PAE2; endopeptidase/ peptidase/ threonine-type endopeptidase | chr3:4764364-4766381 FORWARD 2010-11-05
Genome Context View View with CoGe MgScaffold1 AT1G53850.1 498608 501197 PAE1; endopeptidase/ peptidase/ threonine-type endopeptidase | chr1:20104131-20105792 REVERSE 2010-11-05
Genome Context View View with CoGe MgScaffold1 Medtr8g026620.1 501840 504458 Aminotransferase, class I and II; ; chr08_pseudomolecule_IMGAG_V3 5771287-5764781 F EGN_Mt090430 20090702 2010-11-05
Genome Context View View with CoGe MgScaffold1 Medtr8g027040.1 528206 530696 26S protease regulatory subunit 7, putative chr08_pseudomolecule_IMGAG_V3 6008800-6011099 E EGN_Mt090430 2010-11-05
Genome Context View View with CoGe MgScaffold1 AT1G53750.1 528206 531725 RPT1A (REGULATORY PARTICLE TRIPLE-A 1A); ATPase | chr1:20065921-20068324 REVERSE 2010-11-05
Genome Context View View with CoGe MgScaffold1 Medtr1g121600.1 529128 531725 AAA ATPase; 26S proteasome subunit P45 chr01_pseudomolecule_IMGAG_V3 26555002-26552697 E EGN_Mt090430 2010-11-05
Genome Context View View with CoGe MgScaffold1 Medtr8g027050.1 530770 531725 AAA-protein subdomain chr08_pseudomolecule_IMGAG_V3 6011101-6012521 E EGN_Mt090430 20090702 2010-11-05
Genome Context View View with CoGe MgScaffold1 Medtr2g127110.1 558737 559694 Like-Sm ribonucleoprotein-related, core chr02_pseudomolecule_IMGAG_V3 30927799-30930127 E EGN_Mt090430 2010-11-05
Genome Context View View with CoGe MgScaffold1 Medtr5g080810.1 558737 559694 Like-Sm ribonucleoprotein-related, core chr05_pseudomolecule_IMGAG_V3 30283759-30287155 F EGN_Mt090430 2010-11-05
Genome Context View View with CoGe MgScaffold1 AT1G78900.1 593688 598655 VHA-A (VACUOLAR ATP SYNTHASE SUBUNIT A); ATP binding / hydrogen ion transporting ATP synthase, rotational 2010-11-05
Genome Context View View with CoGe MgScaffold1 AT3G46740.1 622850 627706 TOC75-III (TRANSLOCON AT THE OUTER ENVELOPE MEMBRANE OF CHLOROPLASTS 75-III); P-P-bond-hydrolysis-driven 2010-11-05
Genome Context View View with CoGe MgScaffold1 AT5G59250.1 634494 637288 sugar transporter family protein | chr5:23903958-23906853 FORWARD 2010-11-05
Genome Context View View with CoGe MgScaffold1 Medtr5g036470.1 665654 667817 Sterol desaturase chr05_pseudomolecule_IMGAG_V3 15194182-15197805 F EGN_Mt090430 20090702 2010-11-05
Genome Context View View with CoGe MgScaffold1 Medtr1g093510.1 675539 678915 Serine/threonine-specific protein phosphatase and bis(5-nucleosyl)-tetraphosphatase chr01_pseudomolecule_IMGAG_V3 2010-11-05
Genome Context View View with CoGe MgScaffold1 AT2G39840.1 675731 678954 TOPP4; protein serine/threonine phosphatase | chr2:16627430-16628789 FORWARD 2010-11-05
Genome Context View View with CoGe MgScaffold1 AT2G29400.1 675827 678957 TOPP1 (TYPE ONE PROTEIN PHOSPHATASE 1); protein serine/threonine phosphatase | chr2:12613789-12615283 2010-11-05
Genome Context View View with CoGe MgScaffold1 AT5G59160.1 675827 678936 TOPP2; protein serine/threonine phosphatase | chr5:23879567-23881102 FORWARD 2010-11-05
Genome Context View View with CoGe MgScaffold1 Medtr5g088510.1 675839 678963 Ribosomal protein S16; Serine/threonine-specific protein phosphatase and bis(5-nucleosyl)-tetraphosphatase 2010-11-05
Genome Context View View with CoGe MgScaffold1 Medtr3g092520.1 684368 685654 Sigma-54 factor, interaction region; Ras small GTPase, Rab type; chr03_pseudomolecule_IMGAG_V3 21753746-21751718 2010-11-05
Genome Context View View with CoGe MgScaffold1 AT3G46830.1 684368 685654 ATRABA2C (ARABIDOPSIS RAB GTPASE HOMOLOG A2C); GTP binding | chr3:17246699-17248362 REVERSE 2010-11-05
Genome Context View View with CoGe MgScaffold1 AT5G59150.1 684368 685654 ATRABA2D (HOARABIDOPSIS RAB GTPASE HOMOLOG A2D); GTP binding | chr5:23876858-23878244 FORWARD 2010-11-05
Genome Context View View with CoGe MgScaffold1 AT1G07410.1 684368 685654 ATRABA2B (ARABIDOPSIS RAB GTPASE HOMOLOG A2B); GTP binding / GTPase/ protein binding | chr1:2276270-2277154 2010-11-05
Genome Context View View with CoGe MgScaffold1 Medtr2g114440.1 692931 693217 hypothetical protein chr02_pseudomolecule_IMGAG_V3 27038676-27041150 E EGN_Mt090430 20090702 2010-11-05
Genome Context View View with CoGe MgScaffold1 Medtr4g079020.1 692931 693217 hypothetical protein chr04_pseudomolecule_IMGAG_V3 15625827-15623268 E EGN_Mt090430 20090702 2010-11-05
Genome Context View View with CoGe MgScaffold1 AT2G29650.1 724325 726835 PHT4;1; carbohydrate transmembrane transporter/ inorganic diphosphate transmembrane transporter/ inorganic 2010-11-05
Genome Context View View with CoGe MgScaffold1 Medtr5g104880.1 923855 925019 Ribosomal protein S26E chr05_pseudomolecule_IMGAG_V3 42100136-42097391 E EGN_Mt090430 20090702 2010-11-05
Genome Context View View with CoGe MgScaffold1 AT2G30460.1 933491 936549 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane 2010-11-05
Genome Context View View with CoGe MgScaffold1 AT1G06890.1 933547 936549 transporter-related | chr1:2111728-2114038 REVERSE 2010-11-05
Genome Context View View with CoGe MgScaffold1 Medtr5g083140.1 939573 940558 Expansin 45, endoglucanase-like chr05_pseudomolecule_IMGAG_V3 31498568-31496776 E EGN_Mt090430 20090702 2010-11-05
Genome Context View View with CoGe MgScaffold1 Medtr5g083280.1 971261 973684 Cytochrome P450 chr05_pseudomolecule_IMGAG_V3 31581773-31577928 F EGN_Mt090430 20090702 2010-11-05
Genome Context View View with CoGe MgScaffold1 AT2G30490.1 971261 973684 C4H (CINNAMATE-4-HYDROXYLASE); trans-cinnamate 4-monooxygenase | chr2:12993861-12995683 REVERSE 2010-11-05
Genome Context View View with CoGe MgScaffold1 Medtr5g083390.1 1011792 1014924 Ubiquitin-conjugating enzyme, E2 chr05_pseudomolecule_IMGAG_V3 31655284-31649187 E EGN_Mt090430 20090702 2010-11-05
Genome Context View View with CoGe MgScaffold1 Medtr1g025130.1 1011792 1014634 Ubiquitin-conjugating enzyme, E2 chr01_pseudomolecule_IMGAG_V3 6166755-6161431 E EGN_Mt090430 20090702 2010-11-05
Genome Context View View with CoGe MgScaffold1 Medtr7g143610.1 1011792 1014634 Ubiquitin-conjugating enzyme, E2 chr07_pseudomolecule_IMGAG_V3 34500200-34503295 E EGN_Mt090430 20090702 2010-11-05
Genome Context View View with CoGe MgScaffold1 Medtr3g083600.1 1011792 1014634 Ubiquitin-conjugating enzyme, E2 chr03_pseudomolecule_IMGAG_V3 19686456-19683283 F EGN_Mt090430 20090702 2010-11-05
Genome Context View View with CoGe MgScaffold1 AT3G08690.1 1011792 1014634 UBC11 (UBIQUITIN-CONJUGATING ENZYME 11); ubiquitin-protein ligase | chr3:2641487-2642489 FORWARD 2010-11-05
Genome Context View View with CoGe MgScaffold1 AT5G53300.1 1011792 1014634 UBC10 (ubiquitin-conjugating enzyme 10); ubiquitin-protein ligase | chr5:21632802-21633989 REVERSE 2010-11-05
Genome Context View View with CoGe MgScaffold1 AT5G41700.1 1011792 1014634 UBC8 (UBIQUITIN CONJUGATING ENZYME 8); protein binding / ubiquitin-protein ligase | chr5:16676072-16677223 2010-11-05
Genome Context View View with CoGe MgScaffold1 AT4G27960.1 1011792 1014634 UBC9 (UBIQUITIN CONJUGATING ENZYME 9); ubiquitin-protein ligase | chr4:13916065-13917203 REVERSE 2010-11-05
Genome Context View View with CoGe MgScaffold1 AT1G64230.1 1011792 1014634 ubiquitin-conjugating enzyme, putative | chr1:23833792-23835220 FORWARD 2010-11-05
Genome Context View View with CoGe MgScaffold1 AT5G56150.1 1011792 1013956 UBC30 (ubiquitin-conjugating enzyme 30); ubiquitin-protein ligase | chr5:22729756-22730964 FORWARD 2010-11-05
Genome Context View View with CoGe MgScaffold1 Medtr3g083690.1 1017203 1020209 AAA ATPase; 26S proteasome subunit P45 chr03_pseudomolecule_IMGAG_V3 19726294-19720234 E EGN_Mt090430 2010-11-05
Genome Context View View with CoGe MgScaffold1 AT5G58290.1 1017203 1020181 RPT3 (REGULATORY PARTICLE TRIPLE-A ATPASE 3); ATPase | chr5:23569155-23571116 FORWARD 2010-11-05
Genome Context View View with CoGe MgScaffold1 Medtr8g115520.1 1018855 1019834 AAA ATPase, central region chr08_pseudomolecule_IMGAG_V3 25974612-25971106 E EGN_Mt090430 20090702 2010-11-05
Genome Context View View with CoGe MgScaffold1 Medtr2g132470.1 1039319 1040131 Ribosomal protein L10E chr02_pseudomolecule_IMGAG_V3 32034310-32032022 F EGN_Mt090430 20090702 2010-11-05
Genome Context View View with CoGe MgScaffold1 Medtr3g083780.1 1039319 1040005 Ribosomal protein L10E chr03_pseudomolecule_IMGAG_V3 19777245-19778828 E EGN_Mt090430 20090702 2010-11-05
Genome Context View View with CoGe MgScaffold1 AT1G14320.1 1039319 1040131 SAC52 (SUPPRESSOR OF ACAULIS 52); structural constituent of ribosome | chr1:4888270-4889408 FORWARD 2010-11-05
Genome Context View View with CoGe MgScaffold1 AT1G26910.1 1039319 1040131 60S ribosomal protein L10 (RPL10B) | chr1:9321709-9322813 FORWARD 2010-11-05
Genome Context View View with CoGe MgScaffold1 AT1G66580.1 1039319 1040003 60S ribosomal protein L10 (RPL10C) | chr1:24839208-24840439 FORWARD 2010-11-05
Genome Context View View with CoGe MgScaffold1 AT2G13440.1 1081781 1088205 glucose-inhibited division family A protein | chr2:5593270-5598296 REVERSE 2010-11-05
Genome Context View View with CoGe MgScaffold1 AT5G10860.1 1148874 1149935 CBS domain-containing protein | chr5:3429173-3430142 REVERSE 2010-11-05
Genome Context View View with CoGe MgScaffold1 AT3G25530.1 1161032 1163250 GLYR1 (GLYOXYLATE REDUCTASE 1); 3-hydroxybutyrate dehydrogenase/ phosphogluconate dehydrogenase (decarboxylating) 2010-11-05
Genome Context View View with CoGe MgScaffold1 Medtr3g110350.1 1230110 1232787 Protein of unknown function, ATP binding chr03_pseudomolecule_IMGAG_V3 27796554-27802784 E EGN_Mt090430 2010-11-05
Genome Context View View with CoGe MgScaffold1 Medtr8g011900.1 1335568 1338674 Actin-binding, actinin-type chr08_pseudomolecule_IMGAG_V3 1723417-1717745 E EGN_Mt090430 20090702 2010-11-05
Genome Context View View with CoGe MgScaffold1 Medtr7g104210.1 1528671 1530106 Calcium-binding EF-hand chr07_pseudomolecule_IMGAG_V3 23572973-23574463 E EGN_Mt090430 20090702 2010-11-05
Genome Context View View with CoGe MgScaffold1 Medtr7g104480.1 1528671 1530106 Calcium-binding EF-hand chr07_pseudomolecule_IMGAG_V3 23708305-23709795 E EGN_Mt090430 20090702 2010-11-05
Genome Context View View with CoGe MgScaffold1 Medtr5g095410.1 1528671 1530106 Calcium-binding EF-hand chr05_pseudomolecule_IMGAG_V3 37815712-37812591 F EGN_Mt090430 20090702 2010-11-05
Genome Context View View with CoGe MgScaffold1 AT1G66410.1 1528671 1530106 CAM4 (calmodulin 4); calcium ion binding / signal transducer | chr1:24774431-24775785 REVERSE 2010-11-05
Genome Context View View with CoGe MgScaffold1 AT5G37780.1 1528671 1530106 CAM1 (CALMODULIN 1); calcium ion binding | chr5:15004769-15006117 REVERSE 2010-11-05
Genome Context View View with CoGe MgScaffold1 AT5G21274.1 1528671 1530106 CAM6 (CALMODULIN 6); calcium ion binding | chr5:7214740-7215950 REVERSE 2010-11-05
Genome Context View View with CoGe MgScaffold1 AT2G27030.1 1528671 1530106 CAM5 (CALMODULIN 5); calcium ion binding | chr2:11532069-11533060 FORWARD 2010-11-05
Genome Context View View with CoGe MgScaffold1 AT2G41110.1 1528671 1530106 CAM2 (CALMODULIN 2); calcium ion binding / protein binding | chr2:17140379-17141192 FORWARD 2010-11-05
Genome Context View View with CoGe MgScaffold1 AT3G56800.1 1528671 1530106 CAM3 (CALMODULIN 3); calcium ion binding | chr3:21034981-21035920 REVERSE 2010-11-05
Genome Context View View with CoGe MgScaffold1 AT3G43810.1 1528671 1530106 CAM7 (CALMODULIN 7); calcium ion binding | chr3:15664619-15666355 REVERSE 2010-11-05
Genome Context View View with CoGe MgScaffold1 Medtr6g017580.1 1529765 1530106 Calcium-binding EF-hand chr06_pseudomolecule_IMGAG_V3 4171251-4171995 F EGN_Mt090430 20090702 2010-11-05
Genome Context View View with CoGe MgScaffold1 AT5G12180.1 1653860 1656446 CPK17; ATP binding / calcium ion binding / calmodulin-dependent protein kinase/ kinase/ protein kinase/ 2010-11-05
Genome Context View View with CoGe MgScaffold1 AT5G19360.1 1653860 1656446 CPK34; ATP binding / calcium ion binding / calmodulin-dependent protein kinase/ kinase/ protein kinase/ 2010-11-05
Genome Context View View with CoGe MgScaffold1 Medtr5g096420.1 1653926 1656446 Calcium-dependent protein kinase 2, putative chr05_pseudomolecule_IMGAG_V3 38306667-38303850 E EGN_Mt090430 2010-11-05
Genome Context View View with CoGe MgScaffold1 Medtr7g049860.1 1654229 1656446 Protein kinase; Calcium-binding EF-hand chr07_pseudomolecule_IMGAG_V3 12324926-12332611 E EGN_Mt090430 2010-11-05
Genome Context View View with CoGe MgScaffold1 AT1G50490.1 1794920 1795895 UBC20 (ubiquitin-conjugating enzyme 20); ubiquitin-protein ligase | chr1:18705005-18706303 REVERSE 2010-11-05
Genome Context View View with CoGe MgScaffold1 Medtr7g132920.1 1875931 1879990 MCM; Nucleic acid-binding, OB-fold, subgroup chr07_pseudomolecule_IMGAG_V3 30928106-30922243 E EGN_Mt090430 2010-11-05
Genome Context View View with CoGe MgScaffold1 AT4G02060.1 1876629 1879981 PRL (PROLIFERA); ATP binding / DNA binding / DNA-dependent ATPase/ nucleoside-triphosphatase/ nucleotide 2010-11-05
Genome Context View View with CoGe MgScaffold1 AT5G04590.1 1964798 1967226 SIR; sulfite reductase (ferredoxin)/ sulfite reductase | chr5:1319404-1322298 FORWARD 2010-11-05
Genome Context View View with CoGe MgScaffold1 AT5G19450.1 1971833 1974678 CDPK19 (CALCIUM-DEPENDENT PROTEIN KINASE 19); ATP binding / calcium ion binding / calmodulin-dependent 2010-11-05
Genome Context View View with CoGe MgScaffold1 AT5G12860.1 2001266 2003390 DiT1 (dicarboxylate transporter 1); oxoglutarate:malate antiporter | chr5:4059927-4061919 REVERSE 2010-11-05
Genome Context View View with CoGe MgScaffold1 AT5G13490.1 2120040 2122356 AAC2 (ADP/ATP carrier 2); ATP:ADP antiporter/ binding | chr5:4336034-4337379 FORWARD 2010-11-05
Genome Context View View with CoGe MgScaffold1 AT3G08580.1 2120040 2122356 AAC1 (ADP/ATP CARRIER 1); ATP:ADP antiporter/ binding | chr3:2605706-2607030 REVERSE 2010-11-05
Genome Context View View with CoGe MgScaffold1 Medtr8g037390.1 2144621 2145072 Zinc finger, C2H2-type chr08_pseudomolecule_IMGAG_V3 8096137-8094507 E EGN_Mt090430 20090702 2010-11-05
Genome Context View View with CoGe MgScaffold1 Medtr2g117680.1 2148466 2149203 branchy, putative chr02_pseudomolecule_IMGAG_V3 27713814-27711792 F EGN_Mt090430 20090702 2010-11-05
Genome Context View View with CoGe MgScaffold1 AT5G13070.1 2188901 2189614 MSF1-like family protein | chr5:4148216-4149062 FORWARD 2010-11-05
Genome Context View View with CoGe MgScaffold1 Medtr7g071330.1 2251889 2252299 Histone H3; Histone-fold chr07_pseudomolecule_IMGAG_V3 14686255-14684008 E EGN_Mt090430 20090702 2010-11-05
Genome Context View View with CoGe MgScaffold1 Medtr2g096460.1 2251889 2252299 Histone H3; Aldo/keto reductase; Histone-fold chr02_pseudomolecule_IMGAG_V3 22368116-22367408 E EGN_Mt090430 2010-11-05
Genome Context View View with CoGe MgScaffold1 Medtr2g096490.1 2251889 2252299 Histone H3; Aldo/keto reductase; Histone-fold chr02_pseudomolecule_IMGAG_V3 22373567-22372885 E EGN_Mt090430 2010-11-05

Database lookup time: 0.17809104919434 sec

Loading Help Page...Thanks for your patience!

Loading Video...Thanks for your patience!

Loading Image...Thanks for your patience!