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PpGDB v.0 Loci/Annotations  ?

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Locus ID
Gen
ome
Chr From/To Len
(kb)
Intron
Count
Str #
Tran
Locus Description
(hover for complete description)
Gene Gene Structure Annotation Project Cov
er
age
?
Inte
grity
?
yrGATE
Anno
Count
yrGATE
Anno
Class
?
yrGATE Gene Product Anno
Status
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Pp1s1_2V6 1 7841
8333
0.5 1 r 1 ID=PAC:18069674;Name=Pp1s1_2V6.1;PACid=18069674;Parent=Pp1s1_2V6... 0
Pp1s1_4V6 1 22868
23770
0.9 0 r 1 ID=PAC:18069500;Name=Pp1s1_4V6.1;PACid=18069500;Parent=Pp1s1_4V6... 0.18 0.43
Pp1s1_5V6 1 23854
25552
1.7 1 r 2 ID=PAC:18069832;Name=Pp1s1_5V6.1;PACid=18069832;Parent=Pp1s1_5V6... 0.62 0.46
Pp1s1_12V6 1 80580
82955
2.4 1 r 1 ID=PAC:18069521;Name=Pp1s1_12V6.1;PACid=18069521;Parent=Pp1s1_12V6... 0.99 1
Pp1s1_21V6 1 101680
103335
1.7 1 r 1 ID=PAC:18069537;Name=Pp1s1_21V6.1;PACid=18069537;Parent=Pp1s1_21V6... 1 1
Pp1s1_34V6 1 186326
187597
1.3 0 r 1 ID=PAC:18069834;Name=Pp1s1_34V6.1;PACid=18069834;Parent=Pp1s1_34V6... 0.42 0.83
Pp1s1_35V6 1 188516
188689
0.2 0 r 1 ID=PAC:18069643;Name=Pp1s1_35V6.1;PACid=18069643;Parent=Pp1s1_35V6... 0
Pp1s1_37V6 1 196421
196624
0.2 0 r 1 ID=PAC:18069525;Name=Pp1s1_37V6.1;PACid=18069525;Parent=Pp1s1_37V6... 0
Pp1s1_40V6 1 201378
205343
4 10 r 1 ID=PAC:18069588;Name=Pp1s1_40V6.1;PACid=18069588;Parent=Pp1s1_40V6... 0.97 0.83
Pp1s1_41V6 1 206159
206990
0.8 2 r 1 ID=PAC:18069557;Name=Pp1s1_41V6.1;PACid=18069557;Parent=Pp1s1_41V6... 0.64 0.19
Pp1s1_57V6 1 266619
273229
6.6 10 f 2 ID=PAC:18069686;Name=Pp1s1_57V6.1;PACid=18069686;Parent=Pp1s1_57V6... 0.18 0.22
Pp1s1_59V6 1 277295
279986
2.7 7 f 1 ID=PAC:18069707;Name=Pp1s1_59V6.1;PACid=18069707;Parent=Pp1s1_59V6... 1 0.95
Pp1s1_60V6 1 301788
308711
6.9 17 r 1 ID=PAC:18069853;Name=Pp1s1_60V6.1;PACid=18069853;Parent=Pp1s1_60V6... 0.94 0.79
Pp1s1_61V6 1 315826
317994
2.2 1 r 1 ID=PAC:18069455;Name=Pp1s1_61V6.1;PACid=18069455;Parent=Pp1s1_61V6... 0.82 0.95
Pp1s1_62V6 1 318534
318725
0.2 0 r 1 ID=PAC:18069633;Name=Pp1s1_62V6.1;PACid=18069633;Parent=Pp1s1_62V6... 0
Pp1s1_66V6 1 354351
356299
1.9 2 r 1 ID=PAC:18069712;Name=Pp1s1_66V6.1;PACid=18069712;Parent=Pp1s1_66V6... 1 1
Pp1s1_67V6 1 393154
396079
2.9 5 f 1 ID=PAC:18069728;Name=Pp1s1_67V6.1;PACid=18069728;Parent=Pp1s1_67V6... 0.67 0.8
Pp1s1_68V6 1 398120
399320
1.2 1 f 1 ID=PAC:18069883;Name=Pp1s1_68V6.1;PACid=18069883;Parent=Pp1s1_68V6... 0.72 0.22
Pp1s1_70V6 1 400372
400735
0.4 1 f 1 ID=PAC:18069737;Name=Pp1s1_70V6.1;PACid=18069737;Parent=Pp1s1_70V6... 0
Pp1s1_69V6 1 401119
404303
3.2 4 f 1 ID=PAC:18069904;Name=Pp1s1_69V6.1;PACid=18069904;Parent=Pp1s1_69V6... 0
Pp1s1_71V6 1 405259
406034
0.8 2 f 1 ID=PAC:18069800;Name=Pp1s1_71V6.1;PACid=18069800;Parent=Pp1s1_71V6... 0
Pp1s1_72V6 1 408591
411956
3.4 5 r 2 ID=PAC:18069680;Name=Pp1s1_72V6.1;PACid=18069680;Parent=Pp1s1_72V6... 1 1
Pp1s1_74V6 1 417844
418891
1 1 f 2 ID=PAC:18069758;Name=Pp1s1_74V6.1;PACid=18069758;Parent=Pp1s1_74V6... 0.99 0.69
Pp1s1_76V6 1 438160
442193
4 6 f 1 ID=PAC:18069552;Name=Pp1s1_76V6.1;PACid=18069552;Parent=Pp1s1_76V6... 0.45 0.44
Pp1s1_78V6 1 467944
469728
1.8 2 f 1 ID=PAC:18069813;Name=Pp1s1_78V6.1;PACid=18069813;Parent=Pp1s1_78V6... 0
Pp1s1_80V6 1 472079
472387
0.3 0 f 1 ID=PAC:18069598;Name=Pp1s1_80V6.1;PACid=18069598;Parent=Pp1s1_80V6... 0
Pp1s1_83V6 1 475294
475620
0.3 0 f 1 ID=PAC:18069873;Name=Pp1s1_83V6.1;PACid=18069873;Parent=Pp1s1_83V6... 0
Pp1s1_87V6 1 496093
498571
2.5 2 f 1 ID=PAC:18069611;Name=Pp1s1_87V6.1;PACid=18069611;Parent=Pp1s1_87V6... 0.73 0.87
Pp1s1_89V6 1 505403
508701
3.3 3 f 1 ID=PAC:18069692;Name=Pp1s1_89V6.1;PACid=18069692;Parent=Pp1s1_89V6... 1 1
Pp1s1_91V6 1 514206
516320
2.1 0 r 1 ID=PAC:18069635;Name=Pp1s1_91V6.1;PACid=18069635;Parent=Pp1s1_91V6... 0.84 0.95
Pp1s1_93V6 1 518707
518886
0.2 0 f 1 ID=PAC:18069606;Name=Pp1s1_93V6.1;PACid=18069606;Parent=Pp1s1_93V6... 0
Pp1s1_95V6 1 537112
539886
2.8 4 r 1 ID=PAC:18069677;Name=Pp1s1_95V6.1;PACid=18069677;Parent=Pp1s1_95V6... 0.99 1
Pp1s1_97V6 1 540874
546014
5.1 9 r 1 ID=PAC:18069657;Name=Pp1s1_97V6.1;PACid=18069657;Parent=Pp1s1_97V6... 0.77 0.6
Pp1s1_100V6 1 554503
559135
4.6 6 r 5 ID=PAC:18069900;Name=Pp1s1_100V6.1;PACid=18069900;Parent=Pp1s1_100V6... 0.91 0.82
Pp1s1_106V6 1 586780
589395
2.6 4 r 1 ID=PAC:18069615;Name=Pp1s1_106V6.1;PACid=18069615;Parent=Pp1s1_106V6... 0.37 0.46
Pp1s1_108V6 1 602690
602935
0.2 0 f 1 ID=PAC:18069456;Name=Pp1s1_108V6.1;PACid=18069456;Parent=Pp1s1_108V6... 0
Pp1s1_109V6 1 623418
624729
1.3 2 f 1 ID=PAC:18069470;Name=Pp1s1_109V6.1;PACid=18069470;Parent=Pp1s1_109V6... 0
Pp1s1_111V6 1 628567
630529
2 3 f 1 ID=PAC:18069675;Name=Pp1s1_111V6.1;PACid=18069675;Parent=Pp1s1_111V6... 0
Pp1s1_115V6 1 679493
682337
2.8 4 r 1 ID=PAC:18069670;Name=Pp1s1_115V6.1;PACid=18069670;Parent=Pp1s1_115V6... 0.52 0.7
Pp1s1_117V6 1 684959
685138
0.2 0 f 1 ID=PAC:18069693;Name=Pp1s1_117V6.1;PACid=18069693;Parent=Pp1s1_117V6... 0
Pp1s1_116V6 1 685536
685745
0.2 0 f 1 ID=PAC:18069890;Name=Pp1s1_116V6.1;PACid=18069890;Parent=Pp1s1_116V6... 0
Pp1s1_121V6 1 701245
707001
5.8 12 f 1 ID=PAC:18069742;Name=Pp1s1_121V6.1;PACid=18069742;Parent=Pp1s1_121V6... 0.92 0.85
Pp1s1_125V6 1 759357
762563
3.2 7 r 3 ID=PAC:18069807;Name=Pp1s1_125V6.1;PACid=18069807;Parent=Pp1s1_125V6... 0.87 0.86
Pp1s1_128V6 1 790696
796595
5.9 8 f 2 ID=PAC:18069467;Name=Pp1s1_128V6.1;PACid=18069467;Parent=Pp1s1_128V6... 0.97 0.99
Pp1s1_130V6 1 798396
799029
0.6 1 f 1 ID=PAC:18069471;Name=Pp1s1_130V6.1;PACid=18069471;Parent=Pp1s1_130V6... 0
Pp1s1_134V6 1 813596
814136
0.5 1 r 1 ID=PAC:18069543;Name=Pp1s1_134V6.1;PACid=18069543;Parent=Pp1s1_134V6... 0.86 0.86
Pp1s1_135V6 1 821166
824728
3.6 11 r 1 ID=PAC:18069654;Name=Pp1s1_135V6.1;PACid=18069654;Parent=Pp1s1_135V6... 0.81 0.68
Pp1s1_136V6 1 827650
831375
3.7 7 f 1 ID=PAC:18069660;Name=Pp1s1_136V6.1;PACid=18069660;Parent=Pp1s1_136V6... 0.93 0.89
Pp1s1_141V6 1 850377
854825
4.4 10 r 1 ID=PAC:18069798;Name=Pp1s1_141V6.1;PACid=18069798;Parent=Pp1s1_141V6... 0.99 0.93
Pp1s1_147V6 1 919722
922642
2.9 3 f 1 ID=PAC:18069752;Name=Pp1s1_147V6.1;PACid=18069752;Parent=Pp1s1_147V6... 0.82 0.88
Pp1s1_151V6 1 927724
929266
1.5 2 r 2 ID=PAC:18069844;Name=Pp1s1_151V6.1;PACid=18069844;Parent=Pp1s1_151V6... 1 0.91
Pp1s1_150V6 1 930840
934883
4 11 r 1 ID=PAC:18069831;Name=Pp1s1_150V6.1;PACid=18069831;Parent=Pp1s1_150V6... 0.5 0.26
Pp1s1_152V6 1 940613
944077
3.5 4 r 3 ID=PAC:18069767;Name=Pp1s1_152V6.1;PACid=18069767;Parent=Pp1s1_152V6... 0.89 0.72
Pp1s1_154V6 1 947167
948722
1.6 4 f 1 ID=PAC:18069503;Name=Pp1s1_154V6.1;PACid=18069503;Parent=Pp1s1_154V6... 0.79 0.24
Pp1s1_155V6 1 952698
956189
3.5 3 r 1 ID=PAC:18069460;Name=Pp1s1_155V6.1;PACid=18069460;Parent=Pp1s1_155V6... 0.99 1
Pp1s1_156V6 1 961420
965004
3.6 8 r 2 ID=PAC:18069762;Name=Pp1s1_156V6.1;PACid=18069762;Parent=Pp1s1_156V6... 1 1
Pp1s1_157V6 1 965867
967363
1.5 2 r 1 ID=PAC:18069856;Name=Pp1s1_157V6.1;PACid=18069856;Parent=Pp1s1_157V6... 0.82 0.93
Pp1s1_158V6 1 969046
971219
2.2 2 r 1 ID=PAC:18069538;Name=Pp1s1_158V6.1;PACid=18069538;Parent=Pp1s1_158V6... 0.99 0.96
Pp1s1_162V6 1 1018805
1024983
6.2 14 f 2 ID=PAC:18069732;Name=Pp1s1_162V6.1;PACid=18069732;Parent=Pp1s1_162V6... 0.97 0.97
Pp1s1_163V6 1 1026453
1030182
3.7 7 f 4 ID=PAC:18069542;Name=Pp1s1_163V6.1;PACid=18069542;Parent=Pp1s1_163V6... 0.98 0.99
Pp1s1_164V6 1 1031604
1036841
5.2 12 r 1 ID=PAC:18069673;Name=Pp1s1_164V6.1;PACid=18069673;Parent=Pp1s1_164V6... 0.71 0.6
Pp1s1_167V6 1 1060597
1062376
1.8 1 f 2 ID=PAC:18069522;Name=Pp1s1_167V6.1;PACid=18069522;Parent=Pp1s1_167V6... 0.56 0.54
Pp1s1_168V6 1 1068399
1070309
1.9 2 f 2 ID=PAC:18069667;Name=Pp1s1_168V6.1;PACid=18069667;Parent=Pp1s1_168V6... 0.89 0.82
Pp1s1_170V6 1 1070673
1073767
3.1 1 r 1 ID=PAC:18069825;Name=Pp1s1_170V6.1;PACid=18069825;Parent=Pp1s1_170V6... 0
Pp1s1_169V6 1 1070774
1072611
1.8 3 r 1 ID=PAC:18069908;Name=Pp1s1_169V6.1;PACid=18069908;Parent=Pp1s1_169V6... 0
Pp1s1_173V6 1 1083151
1085918
2.8 2 f 2 ID=PAC:18069793;Name=Pp1s1_173V6.1;PACid=18069793;Parent=Pp1s1_173V6... 1 1
Pp1s1_176V6 1 1089194
1090341
1.1 2 r 1 ID=PAC:18069836;Name=Pp1s1_176V6.1;PACid=18069836;Parent=Pp1s1_176V6... 1 0.99
Pp1s1_178V6 1 1094719
1095897
1.2 0 f 1 ID=PAC:18069569;Name=Pp1s1_178V6.1;PACid=18069569;Parent=Pp1s1_178V6... 0
Pp1s1_179V6 1 1096613
1098289
1.7 3 r 1 ID=PAC:18069594;Name=Pp1s1_179V6.1;PACid=18069594;Parent=Pp1s1_179V6... 0.92 0.98
Pp1s1_180V6 1 1099195
1104417
5.2 13 f 1 ID=PAC:18069535;Name=Pp1s1_180V6.1;PACid=18069535;Parent=Pp1s1_180V6... 1 0.95
Pp1s1_183V6 1 1174112
1181097
7 18 f 1 ID=PAC:18069607;Name=Pp1s1_183V6.1;PACid=18069607;Parent=Pp1s1_183V6... 0.12 0.15
Pp1s1_184V6 1 1186892
1187541
0.6 1 f 1 ID=PAC:18069744;Name=Pp1s1_184V6.1;PACid=18069744;Parent=Pp1s1_184V6... 0
Pp1s1_189V6 1 1220130
1224214
4.1 5 f 1 ID=PAC:18069631;Name=Pp1s1_189V6.1;PACid=18069631;Parent=Pp1s1_189V6... 0.75 0.56
Pp1s1_190V6 1 1229351
1229777
0.4 0 r 1 ID=PAC:18069817;Name=Pp1s1_190V6.1;PACid=18069817;Parent=Pp1s1_190V6... 0
Pp1s1_191V6 1 1229837
1230496
0.7 1 r 1 ID=PAC:18069867;Name=Pp1s1_191V6.1;PACid=18069867;Parent=Pp1s1_191V6... 0
Pp1s1_192V6 1 1230633
1230836
0.2 0 r 1 ID=PAC:18069869;Name=Pp1s1_192V6.1;PACid=18069869;Parent=Pp1s1_192V6... 0
Pp1s1_193V6 1 1231202
1231961
0.8 2 f 1 ID=PAC:18069507;Name=Pp1s1_193V6.1;PACid=18069507;Parent=Pp1s1_193V6... 0
Pp1s1_194V6 1 1232237
1233094
0.9 3 r 1 ID=PAC:18069892;Name=Pp1s1_194V6.1;PACid=18069892;Parent=Pp1s1_194V6... 0
Pp1s1_196V6 1 1234695
1235941
1.2 2 r 1 ID=PAC:18069553;Name=Pp1s1_196V6.1;PACid=18069553;Parent=Pp1s1_196V6... 0
Pp1s1_197V6 1 1236999
1237244
0.2 0 r 1 ID=PAC:18069683;Name=Pp1s1_197V6.1;PACid=18069683;Parent=Pp1s1_197V6... 0
Pp1s1_199V6 1 1254946
1256793
1.8 2 r 3 ID=PAC:18069894;Name=Pp1s1_199V6.1;PACid=18069894;Parent=Pp1s1_199V6... 0.99 1
Pp1s1_200V6 1 1257041
1259072
2 2 f 1 ID=PAC:18069770;Name=Pp1s1_200V6.1;PACid=18069770;Parent=Pp1s1_200V6... 1 0.93
Pp1s1_201V6 1 1262282
1264495
2.2 1 r 1 ID=PAC:18069843;Name=Pp1s1_201V6.1;PACid=18069843;Parent=Pp1s1_201V6... 1 1
Pp1s1_202V6 1 1266910
1269903
3 6 r 1 ID=PAC:18069648;Name=Pp1s1_202V6.1;PACid=18069648;Parent=Pp1s1_202V6... 0.92 0.93
Pp1s1_203V6 1 1279076
1284521
5.4 9 f 2 ID=PAC:18069747;Name=Pp1s1_203V6.1;PACid=18069747;Parent=Pp1s1_203V6... 0.95 0.84
Pp1s1_204V6 1 1286764
1287150
0.4 0 f 1 ID=PAC:18069801;Name=Pp1s1_204V6.1;PACid=18069801;Parent=Pp1s1_204V6... 0
Pp1s1_205V6 1 1288619
1289639
1 2 r 1 ID=PAC:18069616;Name=Pp1s1_205V6.1;PACid=18069616;Parent=Pp1s1_205V6... 0
Pp1s1_206V6 1 1310411
1315271
4.9 4 f 1 ID=PAC:18069791;Name=Pp1s1_206V6.1;PACid=18069791;Parent=Pp1s1_206V6... 1 1
Pp1s1_207V6 1 1319354
1320654
1.3 1 f 1 ID=PAC:18069678;Name=Pp1s1_207V6.1;PACid=18069678;Parent=Pp1s1_207V6... 0.98 0.99
Pp1s1_209V6 1 1321105
1321316
0.2 1 r 1 ID=PAC:18069764;Name=Pp1s1_209V6.1;PACid=18069764;Parent=Pp1s1_209V6... 0
Pp1s1_213V6 1 1347500
1352008
4.5 8 f 1 ID=PAC:18069868;Name=Pp1s1_213V6.1;PACid=18069868;Parent=Pp1s1_213V6... 0
Pp1s1_221V6 1 1434211
1435079
0.9 1 r 1 ID=PAC:18069783;Name=Pp1s1_221V6.1;PACid=18069783;Parent=Pp1s1_221V6... 1 0.96
Pp1s1_222V6 1 1436159
1439549
3.4 5 r 1 ID=PAC:18069578;Name=Pp1s1_222V6.1;PACid=18069578;Parent=Pp1s1_222V6... 0
Pp1s1_225V6 1 1446530
1447291
0.8 1 f 1 ID=PAC:18069642;Name=Pp1s1_225V6.1;PACid=18069642;Parent=Pp1s1_225V6... 0
Pp1s1_227V6 1 1447963
1448584
0.6 1 r 1 ID=PAC:18069881;Name=Pp1s1_227V6.1;PACid=18069881;Parent=Pp1s1_227V6... 0
Pp1s1_230V6 1 1453456
1455222
1.8 1 r 1 ID=PAC:18069802;Name=Pp1s1_230V6.1;PACid=18069802;Parent=Pp1s1_230V6... 1 1
Pp1s1_231V6 1 1458704
1459968
1.3 1 r 1 ID=PAC:18069659;Name=Pp1s1_231V6.1;PACid=18069659;Parent=Pp1s1_231V6... 0.89 0.87
Pp1s1_232V6 1 1460128
1462760
2.6 2 r 1 ID=PAC:18069566;Name=Pp1s1_232V6.1;PACid=18069566;Parent=Pp1s1_232V6... 1 1
Pp1s1_233V6 1 1495666
1495860
0.2 0 f 1 ID=PAC:18069761;Name=Pp1s1_233V6.1;PACid=18069761;Parent=Pp1s1_233V6... 0
Pp1s1_238V6 1 1533079
1536485
3.4 1 f 1 ID=PAC:18069846;Name=Pp1s1_238V6.1;PACid=18069846;Parent=Pp1s1_238V6... 0.51 0.2

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