MgGDB v.0 Loci/Annotations
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| Locus ID |
Gen ome |
Chr | From/To | Len (kb) |
Intron Count |
Str | # Tran |
Locus Description (hover for complete description) |
Gene | Gene Structure Annotation Project | Cov er age  |
Inte grity |
yrGATE Anno Count |
yrGATE Anno Class |
yrGATE Gene Product | Anno Status (click to view) |
Annotate it! |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| mgv1a019588m.g | 1 | 8061 18400 |
10.3 | 21 | f | 1 | PF00005,PF01061,PF08370 PTHR19241 KOG0065 AT1G59870.1 PEN3 PEN3 (PENETRAT... | 0 | |||||||||
| mgv1a002611m.g | 1 | 33767 39318 |
5.6 | 19 | f | 1 | PF00390,PF03949 PTHR23406 KOG1257 1.1.1.40 K00029 AT1G79750.1 ATNADP-ME4 AT... | 1 | 1 | ||||||||
| mgv1a007756m.g | 1 | 41727 45056 |
3.3 | 10 | f | 1 | PF03985 PTHR23188 AT1G79730.1 ELF7 ELF7 (EARLY FLOWERING 7)... | 0.93 | 0.9 | ||||||||
| mgv1a008530m.g | 1 | 45614 49031 |
3.4 | 11 | r | 2 | PF00581 AT3G59780.1 unknown protein... | 0.65 | 0.67 | ||||||||
| mgv1a011501m.g | 1 | 58109 60511 |
2.4 | 5 | f | 1 | PF02309 AT3G16500.1 PAP1 PAP1 (PHYTOCHROME-ASSOCIATED PROTEIN 1); trans... | 0.98 | 1 | ||||||||
| mgv1a005054m.g | 1 | 60860 64878 |
4 | 8 | r | 1 | PF00349,PF03727 PTHR19443 KOG1369 2.7.1.1 K00844 AT4G29130.1 HXK1 HXK1 (HEX... | 0.96 | 0.99 | ||||||||
| mgv1a003599m.g | 1 | 65834 70296 |
4.5 | 8 | r | 1 | PF01909,PF04928,PF04926 PTHR10682 KOG2245 AT4G32850.5 nPAP nPAP (NUCLEAR ... | 0.83 | 0.76 | ||||||||
| mgv1a017188m.g | 1 | 70629 71287 |
0.7 | 2 | r | 1 | AT4G32850.1 nPAP nPAP (NUCLEAR POLY(A) POLYMERASE); nucleotidyltransferase/... | 0 | |||||||||
| mgv1a021295m.g | 1 | 74917 76405 |
1.5 | 2 | f | 1 | PF00612 PTHR13140:SF12 AT3G16490.1 IQD26 IQD26 (IQ-domain 26); calmoduli... | 0.46 | 0.14 | ||||||||
| mgv1a018903m.g | 1 | 86389 88965 |
2.6 | 3 | f | 1 | AT1G52080.1 AR791 AR791; actin binding... | 0 | |||||||||
| mgv1a019714m.g | 1 | 90330 91271 |
0.9 | 0 | f | 1 | PF05910 AT2G04220.1 unknown protein... | 0 | |||||||||
| mgv1a018710m.g | 1 | 92679 94552 |
1.9 | 1 | f | 1 | PF03267,PF02485 AT5G11730.1 unknown protein... | 0 | |||||||||
| mgv1a016015m.g | 1 | 95770 97033 |
1.3 | 3 | f | 1 | ID=PAC:17682634;Name=mgv1a016015m;pacid=17682634;longest=1;Parent=mgv1a0160... | 1 | 0.99 | ||||||||
| mgv1a014002m.g | 1 | 97634 98834 |
1.2 | 2 | f | 1 | PF01419 AT1G73040.1 jacalin lectin family protein... | 1 | 0.96 | ||||||||
| mgv1a004135m.g | 1 | 99957 103111 |
3.2 | 3 | f | 1 | AT3G21295.1 unknown protein... | 0 | |||||||||
| mgv1a015892m.g | 1 | 104141 105885 |
1.7 | 3 | f | 1 | PF01778 PTHR10544 KOG3412 K02903 AT4G29410.1 60S ribosomal protein L28 (R... | 0.97 | 0.97 | ||||||||
| mgv1a002841m.g | 1 | 106268 111229 |
5 | 14 | r | 1 | PF02812,PF00208 PTHR11606 KOG2250 1.4.1.4 K00262 AT1G51720.1 glutamate deh... | 0.93 | 0.71 | ||||||||
| mgv1a004697m.g | 1 | 116095 121726 |
5.6 | 13 | f | 1 | PF00400,PF10586,PF10594 PTHR11871 KOG1354 AT1G17720.2 ATB BETA ATB BETA; ... | 0.9 | 0.87 | ||||||||
| mgv1a013541m.g | 1 | 124075 124787 |
0.7 | 0 | f | 1 | PF02701 AT3G21270.1 ADOF2 ADOF2; DNA binding / transcription factor... | 1 | 0.92 | ||||||||
| mgv1a002323m.g | 1 | 137430 141650 |
4.2 | 9 | f | 1 | PF00069,PF07714 PTHR23258 KOG1187 AT3G13690.1 protein kinase family prot... | 0.9 | 0.93 | ||||||||
| mgv1a011560m.g | 1 | 147208 150950 |
3.7 | 4 | r | 1 | AT1G55170.1 unknown protein... | 0.99 | 0.98 | ||||||||
| mgv1a002308m.g | 1 | 162447 166873 |
4.4 | 15 | f | 1 | PF01301,PF02140 PTHR23421 KOG0496 AT3G13750.1 BGAL1 BGAL1 (Beta galactosi... | 0.42 | 0.34 | ||||||||
| mgv1a002772m.g | 1 | 167391 171391 |
4 | 6 | r | 1 | PF02990 PTHR10766 KOG1278 AT3G13772.1 endomembrane protein 70, putative... | 1 | 0.97 | ||||||||
| mgv1a006195m.g | 1 | 172440 177961 |
5.5 | 14 | r | 1 | PF00400,PF12265 PTHR22850 KOG0264 AT2G19520.1 FVE FVE; metal ion binding... | 1 | 0.97 | ||||||||
| mgv1a001459m.g | 1 | 181700 191123 |
9.4 | 22 | f | 1 | PF05879 PTHR10751 KOG2203 AT3G13870.1 RHD3 RHD3 (ROOT HAIR DEFECTIVE 3); ... | 1 | 0.98 | ||||||||
| mgv1a012216m.g | 1 | 197066 198040 |
1 | 0 | f | 1 | PF07320,PF03168 AT1G17620.1 unknown protein... | 1 | 0.96 | ||||||||
| mgv1a027148m.g | 1 | 199244 201103 |
1.9 | 2 | r | 1 | PF03195 AT3G13850.1 LBD22 LBD22 (LOB DOMAIN-CONTAINING PROTEIN 22)... | 0 | |||||||||
| mgv1a017583m.g | 1 | 202298 204179 |
1.9 | 1 | f | 1 | AT3G13845.1 unknown protein... | 0.85 | 0.94 | ||||||||
| mgv1a011229m.g | 1 | 204787 206051 |
1.3 | 1 | f | 1 | AT3G13780.1 unknown protein... | 0 | |||||||||
| mgv1a008297m.g | 1 | 207601 210974 |
3.4 | 11 | f | 1 | PF03446,PF03807 PTHR22981 KOG0409 AT1G17650.1 GLYR2 GLYR2 (GLYOXYLATE RED... | 1 | 0.96 | ||||||||
| mgv1a015484m.g | 1 | 211470 214118 |
2.6 | 2 | f | 1 | PF00468 AT3G13882.1 structural constituent of ribosome... | 1 | 0.97 | ||||||||
| mgv1a012099m.g | 1 | 218895 220026 |
1.1 | 2 | r | 1 | AT1G72670.1 iqd8 iqd8 (IQ-domain 8); calmodulin binding... | 0.96 | 0.94 | ||||||||
| mgv1a022816m.g | 1 | 221659 222681 |
1 | 1 | f | 1 | AT1G72690.1 unknown protein... | 0.84 | 0.25 | ||||||||
| mgv11b018638m.g | 1 | 224679 224894 |
0.2 | 0 | f | 1 | AT5G10310.1 unknown protein... | 0 | |||||||||
| mgv1a014628m.g | 1 | 225707 228181 |
2.5 | 5 | f | 2 | PF01217 PTHR11043 KOG3343 AT1G60970.1 clathrin adaptor complex small cha... | 0.98 | 0.97 | ||||||||
| mgv1a000361m.g | 1 | 231817 237723 |
5.9 | 9 | f | 1 | PF00702 PTHR11939 KOG0206 3.6.3.1 K01530 AT1G17500.1 ATPase, coupled to tr... | 0.35 | 0.42 | ||||||||
| mgv1a005939m.g | 1 | 239045 243114 |
4.1 | 12 | f | 1 | PF00069 PTHR11909 KOG1163 2.7.11.1 K02218 AT1G72710.1 CKL2 CKL2 (CASEIN KIN... | 1 | 1 | ||||||||
| mgv1a024058m.g | 1 | 244601 244966 |
0.4 | 0 | r | 1 | PF12023 AT2G19460.1 unknown protein... | 1 | 0.85 | ||||||||
| mgv1a007331m.g | 1 | 247000 250326 |
3.3 | 4 | r | 1 | PF00270,PF00271 PTHR10967 KOG0328 K03257 AT3G13920.1 EIF4A1 EIF4A1 (EUKARY... | 1 | 0.98 | ||||||||
| mgv1a012697m.g | 1 | 251539 254833 |
3.3 | 5 | r | 1 | PF00249 PTHR21717:SF4 AT1G17520.1 DNA-binding protein, putative... | 0.99 | 0.98 | ||||||||
| mgv1a003906m.g | 1 | 256867 263187 |
6.3 | 18 | f | 1 | PF00364,PF02817,PF00198 PTHR23151 KOG0557 2.3.1.12 K00627 AT1G54220.1 dihy... | 0.95 | 0.96 | ||||||||
| mgv1a027042m.g | 1 | 264068 264643 |
0.6 | 0 | r | 1 | PF02466 PTHR15371 KOG3324 AT1G17530.1 ATTIM23-1 ATTIM23-1 (TRANSLOCASE OF... | 1 | 0.9 | ||||||||
| mgv1a001438m.g | 1 | 267790 272719 |
4.9 | 8 | r | 1 | PF00582,PF00069,PF07714 PTHR23258 KOG1187 AT5G12000.1 kinase... | 0 | |||||||||
| mgv1a005458m.g | 1 | 275799 278823 |
3 | 4 | f | 1 | PF00481 PTHR13832 KOG0698 AT1G72770.1 HAB1 HAB1 (HOMOLOGY TO ABI1); catal... | 0.82 | 0.79 | ||||||||
| mgv1a009368m.g | 1 | 278889 281145 |
2.3 | 3 | r | 1 | PF06870 KOG4183 AT3G13940.1 DNA binding / DNA-directed RNA polymerase... | 0.64 | 0.48 | ||||||||
| mgv1a022443m.g | 1 | 282910 283179 |
0.3 | 0 | r | 1 | PF00234 AT5G48485.1 DIR1 DIR1 (DEFECTIVE IN INDUCED RESISTANCE 1); lipi... | 0 | |||||||||
| mgv1a011858m.g | 1 | 284565 288593 |
4 | 4 | r | 1 | PF07649,PF00628,PF12165 PTHR23123 KOG1632 AT5G20510.1 AL5 AL5 (ALFIN-LIKE... | 1 | 0.99 | ||||||||
| mgv1a020926m.g | 1 | 291113 295288 |
4.2 | 8 | r | 1 | PF06741,PF07145 PTHR12854 KOG2375 AT1G54170.1 CID3 CID3 (CTC-Interacting ... | 0 | |||||||||
| mgv1a002508m.g | 1 | 303207 306753 |
3.5 | 5 | r | 1 | PF02450 PTHR11440 AT5G13640.1 PDAT ATPDAT; phosphatidylcholine-sterol O-... | 0.81 | 0.77 | ||||||||
| mgv1a026119m.g | 1 | 310346 311464 |
1.1 | 0 | f | 1 | AT1G54200.1 unknown protein... | 0 | |||||||||
| mgv1a005063m.g | 1 | 313486 319803 |
6.3 | 7 | r | 1 | PF00249 PTHR21717:SF5 AT1G72650.1 TRFL6 TRFL6 (TRF-LIKE 6); DNA binding ... | 0.98 | 0.91 | ||||||||
| mgv1a012389m.g | 1 | 321554 328301 |
6.7 | 13 | f | 2 | PTHR14194 AT1G72640.2 binding / catalytic... | 1 | 0.93 | ||||||||
| mgv1a016615m.g | 1 | 324090 325855 |
1.8 | 1 | r | 1 | PF07011 AT1G17455.1 ELF4-L4 ELF4-L4 (ELF4-Like 4)... | 1 | 1 | ||||||||
| mgv11b017157m.g | 1 | 325906 327741 |
1.8 | 3 | f | 1 | PF04110 PTHR13385 KOG3439 K08336 AT1G54210.1 ATG12A ATG12A (AUTOPHAGY 12 A... | 1 | 0.7 | ||||||||
| mgv1a023220m.g | 1 | 327792 328570 |
0.8 | 1 | r | 1 | PTHR10641 AT2G16720.1 MYB7 MYB7 (MYB DOMAIN PROTEIN 7); DNA binding / tr... | 0 | 0 | ||||||||
| mgv1a022096m.g | 1 | 344760 345392 |
0.6 | 0 | f | 1 | PF00190,PF07883 AT1G72610.1 GER1 GER1 (GERMIN-LIKE PROTEIN 1); oxalate ... | 1 | 0.9 | ||||||||
| mgv1a002120m.g | 1 | 352828 356949 |
4.1 | 5 | r | 1 | PF01966,PF04607 PTHR21262 KOG1157 AT3G14050.1 RSH2 RSH2 (RELA-SPOT HOMOLO... | 0.63 | 0.74 | ||||||||
| mgv1a022770m.g | 1 | 359607 359873 |
0.3 | 0 | r | 1 | AT1G54120.1 unknown protein... | 0 | |||||||||
| mgv1a023513m.g | 1 | 368258 371954 |
3.7 | 10 | f | 1 | PF00171 PTHR11699 KOG2453 AT1G54100.1 ALDH7B4 ALDH7B4 (Aldehyde Dehydroge... | 1 | 0.84 | ||||||||
| mgv1a027030m.g | 1 | 378040 381080 |
3 | 6 | r | 1 | PF03893,PF01764 PTHR21493 KOG2088 AT3G14075.1 lipase class 3 family prot... | 0.41 | 0.12 | ||||||||
| mgv1a017823m.g | 1 | 388519 389455 |
0.9 | 2 | f | 1 | AT1G72490.1 unknown protein... | 0 | |||||||||
| mgv1a016267m.g | 1 | 390337 392989 |
2.7 | 4 | f | 1 | PF01423 PTHR15588 KOG1782 AT3G14080.1 small nuclear ribonucleoprotein, p... | 0.94 | 0.98 | ||||||||
| mgv1a004785m.g | 1 | 394242 397547 |
3.3 | 4 | f | 1 | PF06814 PTHR21229 KOG2568 AT1G72480.1 unknown protein... | 0.87 | 0.76 | ||||||||
| mgv1a003731m.g | 1 | 399435 401396 |
2 | 0 | r | 1 | PF03081 PTHR12542 KOG2344 AT1G72470.1 ATEXO70D1 ATEXO70D1 (exocyst subuni... | 0 | |||||||||
| mgv1a025291m.g | 1 | 402201 404360 |
2.2 | 1 | r | 1 | PF08263,PF00560,PF00069 PTHR23258 KOG1187 AT3G42880.1 leucine-rich repea... | 0 | |||||||||
| mgv1a013086m.g | 1 | 407177 409396 |
2.2 | 4 | f | 3 | PF06200,PF09425 PTHR23418:SF2 AT1G72450.1 JAZ6 JAZ6 (JASMONATE-ZIM-DOMAI... | 1.01 | 0.97 | ||||||||
| mgv1a007027m.g | 1 | 410417 414960 |
4.5 | 11 | f | 1 | PF00076 PTHR10432 KOG0148 AT1G17370.1 UBP1B UBP1B (oligouridylate binding... | 1 | 0.95 | ||||||||
| mgv1a000423m.g | 1 | 415629 427908 |
12.3 | 24 | f | 1 | PF04121 PTHR13003 KOG1964 AT3G14120.2 unknown protein... | 0.4 | 0.37 | ||||||||
| mgv1a013509m.g | 1 | 428009 431779 |
3.8 | 5 | r | 1 | PF00957 PTHR21136 KOG0862 K08517 AT1G11890.1 SEC22 SEC22; transporter... | 1 | 1 | ||||||||
| mgv1a025981m.g | 1 | 434200 437059 |
2.9 | 3 | r | 1 | PF06075 AT1G08760.1 unknown protein... | 0 | |||||||||
| mgv1a000216m.g | 1 | 437877 445445 |
7.6 | 9 | r | 1 | AT3G14172.1 unknown protein... | 0.29 | 0.27 | ||||||||
| mgv1a016014m.g | 1 | 454629 455771 |
1.1 | 3 | r | 1 | ID=PAC:17688512;Name=mgv1a016014m;pacid=17688512;longest=1;Parent=mgv1a0160... | 0.4 | 0.12 | ||||||||
| mgv1a018554m.g | 1 | 456255 458845 |
2.6 | 3 | r | 1 | AT3G14172.1 unknown protein... | 0 | |||||||||
| mgv1a015504m.g | 1 | 460031 460643 |
0.6 | 0 | r | 1 | ID=PAC:17687915;Name=mgv1a015504m;pacid=17687915;longest=1;Parent=mgv1a0155... | 1 | 0.95 | ||||||||
| mgv1a016024m.g | 1 | 462029 463288 |
1.3 | 2 | r | 2 | PF05564 AT1G54070.1 dormancy/auxin associated protein-related... | 1 | 0.97 | ||||||||
| mgv1a009975m.g | 1 | 466811 468931 |
2.1 | 2 | r | 1 | PF00847 AT1G53910.3 RAP2.12 RAP2.12; DNA binding / transcription factor... | 1 | 0.96 | ||||||||
| mgv1a015271m.g | 1 | 472807 473739 |
0.9 | 1 | r | 1 | PF04570 AT1G53885.1 senescence-associated protein-related... | 1 | 0.99 | ||||||||
| mgv1a007694m.g | 1 | 478632 481802 |
3.2 | 4 | r | 1 | PF01008 PTHR10233 KOG1466 K03239 AT1G53880.1 GTP binding / translation in... | 0.95 | 0.96 | ||||||||
| mgv1a020479m.g | 1 | 484292 485129 |
0.8 | 2 | r | 1 | PF04525 AT3G14260.1 unknown protein... | 0 | |||||||||
| mgv1a000120m.g | 1 | 488877 497460 |
8.6 | 10 | f | 1 | PF01363,PF01504 PTHR23086 KOG0230 AT3G14270.1 phosphatidylinositol-4-pho... | 0.24 | 0.12 | ||||||||
| mgv1a012886m.g | 1 | 498436 501393 |
3 | 8 | f | 1 | PF10584,PF00227 PTHR11599 KOG0176 3.4.25.1 K02729 AT1G53850.1 PAE1 PAE1; en... | 1 | 0.99 | ||||||||
| mgv1a005454m.g | 1 | 501662 504900 |
3.2 | 13 | r | 1 | PF00155 PTHR11751 KOG0258 AT1G72330.1 ALAAT2 ALAAT2 (ALANINE AMINOTRANSFE... | 1 | 0.97 | ||||||||
| mgv1a003666m.g | 1 | 508434 511486 |
3.1 | 1 | r | 1 | PF04043,PF01095 AT1G53840.1 ATPME1 ATPME1; pectinesterase... | 1 | 0.96 | ||||||||
| mgv1a017440m.g | 1 | 518270 518535 |
0.3 | 0 | f | 1 | ID=PAC:17669585;Name=mgv1a017440m;pacid=17669585;longest=1;Parent=mgv1a0174... | 0 | |||||||||
| mgv1a023632m.g | 1 | 520722 521631 |
0.9 | 1 | r | 1 | PF00097 PTHR22764 AT1G72310.1 ATL3 ATL3; protein binding / zinc ion bind... | 1 | 0.3 | ||||||||
| mgv1a003936m.g | 1 | 523527 526434 |
2.9 | 6 | f | 1 | PF07460 AT1G53800.1 endonuclease... | 0.73 | 0.82 | ||||||||
| mgv1a005351m.g | 1 | 527894 531935 |
4 | 10 | f | 1 | PF00004 PTHR23073 KOG0729 K03061 AT1G53750.1 RPT1A RPT1A (REGULATORY PARTI... | 0.93 | 0.87 | ||||||||
| mgv1a026670m.g | 1 | 532903 535042 |
2.1 | 4 | f | 1 | PF01764 KOG4569 AT3G14360.1 lipase class 3 family protein... | 0 | |||||||||
| mgv1a018357m.g | 1 | 539918 540121 |
0.2 | 0 | f | 1 | PF08137 AT1G53708.1 RTFL9 RTFL9 (ROTUNDIFOLIA LIKE 9)... | 0 | |||||||||
| mgv1a004474m.g | 1 | 541549 544582 |
3 | 12 | r | 1 | PF00149 PTHR13315 KOG3662 AT1G53710.1 hydrolase/ protein serine/threonin... | 0.47 | 0.45 | ||||||||
| mgv1a000641m.g | 1 | 545672 548779 |
3.1 | 0 | r | 1 | PF08263,PF00560,PF00069,PF07714 PTHR23258 KOG1187 AT1G72300.1 leucine-ri... | 0.2 | 0.66 | ||||||||
| mgv1a009265m.g | 1 | 550180 551396 |
1.2 | 0 | r | 1 | PF00069,PF07714 PTHR22986 KOG0581 AT3G21220.1 MKK5 ATMKK5 (ARABIDOPSIS TH... | 0.64 | 0.84 | ||||||||
| mgv1a003962m.g | 1 | 552849 554876 |
2 | 2 | f | 1 | PF00732,PF05199 PTHR11552 KOG1238 4.1.2.10 K08248 AT1G73050.1 (R)-mandelon... | 0 | |||||||||
| mgv1a015080m.g | 1 | 556084 557182 |
1.1 | 1 | r | 1 | AT1G17744.1 unknown protein... | 0 | |||||||||
| mgv1a021491m.g | 1 | 558838 559694 |
0.9 | 4 | r | 1 | PF01423 PTHR11193 KOG1774 K11097 AT2G18740.1 small nuclear ribonucleoprot... | 0 | |||||||||
| mgv1a009541m.g | 1 | 560746 563668 |
2.9 | 8 | f | 1 | PF00076 PTHR12742 KOG1457 AT3G21215.1 RNA-binding protein, putative... | 1 | 0.99 | ||||||||
| mgv1a002145m.g | 1 | 564540 570003 |
5.5 | 10 | r | 1 | PF10150 AT2G04270.4 RNEE/G RNEE/G (RNASE E/G-LIKE); endoribonuclease... | 0.6 | 0.64 | ||||||||
| mgv1a023751m.g | 1 | 571097 575252 |
4.2 | 5 | f | 1 | PF01094,PF00497,PF00060 PTHR18966 KOG1052 AT2G29120.1 ATGLR2.7 ATGLR2.7; ... | 0 | |||||||||
| mgv1a009881m.g | 1 | 575790 578166 |
2.4 | 4 | f | 1 | AT3G21200.1 unknown protein... | 1 | 0.97 | ||||||||
| mgv1a001933m.g | 1 | 581497 587629 |
6.1 | 16 | f | 1 | PF04675,PF01068,PF04679 PTHR10459 KOG0967 6.5.1.1 K10747 AT1G08130.1 ATLIG1... | 0 |