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CsGDB v.0 Loci/Annotations  ?

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Locus ID
Gen
ome
Chr From/To Len
(kb)
Intron
Count
Str #
Tran
Locus Description
(hover for complete description)
Gene Gene Structure Annotation Project Cov
er
age
?
Inte
grity
?
yrGATE
Anno
Count
yrGATE
Anno
Class
?
yrGATE Gene Product Anno
Status
(click to view)
Annotate it!
Cucsa.000200 9 1869
4028
2.2 2 r 1 mRNA Cucsa.000200.1;Name Cucsa.000200.1;PACid 16950862;letterCode E... 0
Cucsa.000210 9 10369
14443
4.1 7 r 2 mRNA Cucsa.000210.1;Name Cucsa.000210.1;PACid 16950863;letterCode E... 0.18 0.34
Cucsa.000220 9 14057
14266
0.2 0 f 1 mRNA Cucsa.000220.1;Name Cucsa.000220.1;PACid 16950865;letterCode Ei... 0
Cucsa.000230 9 19240
20399
1.2 2 r 1 mRNA Cucsa.000230.1;Name Cucsa.000230.1;PACid 16950866;letterCode E... 0
Cucsa.000240 9 23443
24811
1.4 2 r 1 mRNA Cucsa.000240.1;Name Cucsa.000240.1;PACid 16950867;letterCode H... 0
Cucsa.000250 9 37035
37809
0.8 1 r 1 mRNA Cucsa.000250.1;Name Cucsa.000250.1;PACid 16950868;letterCode E... 0
Cucsa.000260 9 38787
40180
1.4 3 f 1 mRNA Cucsa.000260.1;Name Cucsa.000260.1;PACid 16950869;letterCode H... 0
Cucsa.000270 9 43733
43988
0.3 0 f 1 mRNA Cucsa.000270.1;Name Cucsa.000270.1;PACid 16950870;letterCode Ei... 0
Cucsa.000280 9 53187
54441
1.3 3 f 1 mRNA Cucsa.000280.1;Name Cucsa.000280.1;PACid 16950871;letterCode Ei... 0
Cucsa.000290 9 80037
81558
1.5 3 f 1 mRNA Cucsa.000290.1;Name Cucsa.000290.1;PACid 16950872;letterCode E... 0
Cucsa.000490 11 1078
1329
0.3 0 f 1 mRNA Cucsa.000490.1;Name Cucsa.000490.1;PACid 16950873;letterCode Ei... 0.68 0.58
Cucsa.000690 13 29639
33325
3.7 9 r 1 mRNA Cucsa.000690.1;Name Cucsa.000690.1;PACid 16950874;letterCode H... 0
Cucsa.000890 17 292
1215
0.9 0 r 1 mRNA Cucsa.000890.1;Name Cucsa.000890.1;PACid 16950875;letterCode H... 0
Cucsa.001090 19 59
511
0.5 0 r 1 mRNA Cucsa.001090.1;Name Cucsa.001090.1;PACid 16950876;letterCode Ei... 0
Cucsa.001290 20 14466
17433
3 3 r 1 mRNA Cucsa.001290.1;Name Cucsa.001290.1;PACid 16950877;letterCode Ei... 0
Cucsa.001300 20 23947
28302
4.4 4 r 1 mRNA Cucsa.001300.1;Name Cucsa.001300.1;PACid 16950878;letterCode Ei... 0
Cucsa.001310 20 38110
49792
11.7 7 f 1 mRNA Cucsa.001310.1;Name Cucsa.001310.1;PACid 16950879;letterCode E... 0
Cucsa.001320 20 51144
63097
12 11 r 1 mRNA Cucsa.001320.1;Name Cucsa.001320.1;PACid 16950880;letterCode E... 0
Cucsa.001330 20 73473
78185
4.7 3 f 2 mRNA Cucsa.001330.1;Name Cucsa.001330.1;PACid 16950881;letterCode E... 0
Cucsa.001340 20 90406
92120
1.7 0 f 1 mRNA Cucsa.001340.1;Name Cucsa.001340.1;PACid 16950883;letterCode E... 0.59 0.83
Cucsa.001350 20 116022
118120
2.1 4 f 1 mRNA Cucsa.001350.1;Name Cucsa.001350.1;PACid 16950884;letterCode H... 0
Cucsa.001360 20 125766
129247
3.5 1 r 1 mRNA Cucsa.001360.1;Name Cucsa.001360.1;PACid 16950885;letterCode E... 0
Cucsa.001370 20 141548
147344
5.8 6 f 2 mRNA Cucsa.001370.1;Name Cucsa.001370.1;PACid 16950886;letterCode E... 0
Cucsa.001380 20 163890
163993
0.1 0 f 1 mRNA Cucsa.001380.1;Name Cucsa.001380.1;PACid 16950888;letterCode H... 0
Cucsa.001390 20 170258
175714
5.5 7 f 1 mRNA Cucsa.001390.1;Name Cucsa.001390.1;PACid 16950889;letterCode Ei... 0
Cucsa.001400 20 175871
178332
2.5 1 r 1 mRNA Cucsa.001400.1;Name Cucsa.001400.1;PACid 16950890;letterCode E... 0
Cucsa.001410 20 188952
198797
9.8 7 r 2 mRNA Cucsa.001410.1;Name Cucsa.001410.1;PACid 16950891;letterCode E... 0.14 0.4
Cucsa.001610 21 34410
36912
2.5 3 f 1 mRNA Cucsa.001610.1;Name Cucsa.001610.1;PACid 16950893;letterCode H... 0
Cucsa.001810 23 24555
28163
3.6 9 r 1 mRNA Cucsa.001810.1;Name Cucsa.001810.1;PACid 16950894;letterCode H;letterC... 0
Cucsa.001820 23 33316
43171
9.9 4 f 2 mRNA Cucsa.001820.1;Name Cucsa.001820.1;PACid 16950895;letterCode Ei... 0
Cucsa.001830 23 55083
55577
0.5 0 f 1 mRNA Cucsa.001830.1;Name Cucsa.001830.1;PACid 16950897;letterCode H... 0
Cucsa.001840 23 81610
83013
1.4 1 f 1 mRNA Cucsa.001840.1;Name Cucsa.001840.1;PACid 16950898;letterCode H... 0
Cucsa.002040 29 76
415
0.3 1 f 1 mRNA Cucsa.002040.1;Name Cucsa.002040.1;PACid 16950899;letterCode Ei... 0
Cucsa.002240 32 785
2267
1.5 3 r 1 mRNA Cucsa.002240.1;Name Cucsa.002240.1;PACid 16950900;letterCode E... 0
Cucsa.002250 32 19388
21495
2.1 3 f 1 mRNA Cucsa.002250.1;Name Cucsa.002250.1;PACid 16950901;letterCode H... 0
Cucsa.002260 32 25122
36891
11.8 7 f 1 mRNA Cucsa.002260.1;Name Cucsa.002260.1;PACid 16950902;letterCode E... 0.79 0.92
Cucsa.002270 32 43589
47500
3.9 3 f 1 mRNA Cucsa.002270.1;Name Cucsa.002270.1;PACid 16950903;letterCode Ei... 0.29 0.09
Cucsa.002280 32 52991
54990
2 1 f 1 mRNA Cucsa.002280.1;Name Cucsa.002280.1;PACid 16950904;letterCode E... 0
Cucsa.002290 32 61367
63965
2.6 4 f 1 mRNA Cucsa.002290.1;Name Cucsa.002290.1;PACid 16950905;letterCode E... 0
Cucsa.002300 32 71107
71777
0.7 1 f 1 mRNA Cucsa.002300.1;Name Cucsa.002300.1;PACid 16950906;letterCode Ei... 0
Cucsa.002310 32 72910
73327
0.4 0 r 1 mRNA Cucsa.002310.1;Name Cucsa.002310.1;PACid 16950907;letterCode E... 0
Cucsa.002320 32 79603
84271
4.7 6 f 4 mRNA Cucsa.002320.1;Name Cucsa.002320.1;PACid 16950908;letterCode E... 0
Cucsa.002330 32 88604
89039
0.4 0 f 1 mRNA Cucsa.002330.1;Name Cucsa.002330.1;PACid 16950912;letterCode E... 0
Cucsa.002530 33 3912
11486
7.6 16 f 2 mRNA Cucsa.002530.1;Name Cucsa.002530.1;PACid 16950913;letterCode E... 0
Cucsa.002540 33 18608
25307
6.7 4 f 1 mRNA Cucsa.002540.1;Name Cucsa.002540.1;PACid 16950915;letterCode Ea... 0
Cucsa.002550 33 33662
41921
8.3 11 f 1 mRNA Cucsa.002550.1;Name Cucsa.002550.1;PACid 16950916;letterCode Ei... 0
Cucsa.002560 33 43895
45548
1.7 6 r 1 mRNA Cucsa.002560.1;Name Cucsa.002560.1;PACid 16950917;letterCode Ei... 0
Cucsa.002570 33 51520
53685
2.2 2 f 1 mRNA Cucsa.002570.1;Name Cucsa.002570.1;PACid 16950918;letterCode Ei... 0
Cucsa.002580 33 56236
57910
1.7 1 r 1 mRNA Cucsa.002580.1;Name Cucsa.002580.1;PACid 16950919;letterCode H... 0
Cucsa.002590 33 66060
69473
3.4 5 r 1 mRNA Cucsa.002590.1;Name Cucsa.002590.1;PACid 16950920;letterCode E... 0
Cucsa.002600 33 109671
115284
5.6 6 r 3 mRNA Cucsa.002600.1;Name Cucsa.002600.1;PACid 16950921;letterCode E... 0
Cucsa.002610 33 133381
144587
11.2 6 r 2 mRNA Cucsa.002610.1;Name Cucsa.002610.1;PACid 16950924;letterCode E... 0
Cucsa.002620 33 167497
171641
4.1 6 r 6 mRNA Cucsa.002620.1;Name Cucsa.002620.1;PACid 16950926;letterCode E... 0
Cucsa.002630 33 183515
189596
6.1 8 r 2 mRNA Cucsa.002630.1;Name Cucsa.002630.1;PACid 16950932;letterCode E... 0
Cucsa.002640 33 202040
205673
3.6 3 f 2 mRNA Cucsa.002640.1;Name Cucsa.002640.1;PACid 16950934;letterCode E... 0.49 0.22
Cucsa.002650 33 206980
213994
7 5 r 2 mRNA Cucsa.002650.1;Name Cucsa.002650.1;PACid 16950936;letterCode E... 0
Cucsa.002660 33 217023
227301
10.3 10 r 1 mRNA Cucsa.002660.1;Name Cucsa.002660.1;PACid 16950938;letterCode E... 0
Cucsa.002670 33 230013
230440
0.4 0 r 1 mRNA Cucsa.002670.1;Name Cucsa.002670.1;PACid 16950939;letterCode E... 0
Cucsa.002680 33 231715
233011
1.3 0 r 1 mRNA Cucsa.002680.1;Name Cucsa.002680.1;PACid 16950940;letterCode E... 0
Cucsa.002880 34 40262
43297
3 2 f 1 mRNA Cucsa.002880.1;Name Cucsa.002880.1;PACid 16950941;letterCode E... 1 0.6
Cucsa.002890 34 44340
44571
0.2 0 r 1 mRNA Cucsa.002890.1;Name Cucsa.002890.1;PACid 16950942;letterCode Ei... 0
Cucsa.002900 34 71170
80067
8.9 8 r 4 mRNA Cucsa.002900.1;Name Cucsa.002900.1;PACid 16950943;letterCode E... 0
Cucsa.002910 34 85685
89423
3.7 8 r 1 mRNA Cucsa.002910.1;Name Cucsa.002910.1;PACid 16950947;letterCode H;letterC... 0
Cucsa.002920 34 98833
100361
1.5 1 f 1 mRNA Cucsa.002920.1;Name Cucsa.002920.1;PACid 16950948;letterCode E... 0
Cucsa.002930 34 106450
112283
5.8 2 r 1 mRNA Cucsa.002930.1;Name Cucsa.002930.1;PACid 16950949;letterCode E... 0
Cucsa.002940 34 118610
129497
10.9 12 f 3 mRNA Cucsa.002940.1;Name Cucsa.002940.1;PACid 16950950;letterCode E... 0
Cucsa.002950 34 149629
152450
2.8 2 r 1 mRNA Cucsa.002950.1;Name Cucsa.002950.1;PACid 16950953;letterCode E... 0
Cucsa.002960 34 155433
157270
1.8 1 f 1 mRNA Cucsa.002960.1;Name Cucsa.002960.1;PACid 16950954;letterCode E... 0
Cucsa.002970 34 164548
167441
2.9 2 r 1 mRNA Cucsa.002970.1;Name Cucsa.002970.1;PACid 16950955;letterCode Ei... 0
Cucsa.002980 34 172506
174317
1.8 2 r 1 mRNA Cucsa.002980.1;Name Cucsa.002980.1;PACid 16950956;letterCode E... 0
Cucsa.002990 34 190506
193655
3.1 3 r 1 mRNA Cucsa.002990.1;Name Cucsa.002990.1;PACid 16950957;letterCode Ei... 0
Cucsa.003190 35 6372
7145
0.8 0 f 1 mRNA Cucsa.003190.1;Name Cucsa.003190.1;PACid 16950958;letterCode E... 0
Cucsa.003200 35 38723
39967
1.2 0 r 1 mRNA Cucsa.003200.1;Name Cucsa.003200.1;PACid 16950959;letterCode Ei... 0
Cucsa.003210 35 43003
48294
5.3 6 f 2 mRNA Cucsa.003210.1;Name Cucsa.003210.1;PACid 16950960;letterCode E... 0
Cucsa.003220 35 65581
68001
2.4 3 r 6 mRNA Cucsa.003220.1;Name Cucsa.003220.1;PACid 16950962;letterCode E... 0.11 0.13
Cucsa.003230 35 72980
77787
4.8 9 r 3 mRNA Cucsa.003230.1;Name Cucsa.003230.1;PACid 16950968;letterCode E... 0
Cucsa.003430 41 2796
4777
2 5 f 1 mRNA Cucsa.003430.1;Name Cucsa.003430.1;PACid 16950971;letterCode E... 0
Cucsa.003630 45 3473
7631
4.2 6 r 1 mRNA Cucsa.003630.1;Name Cucsa.003630.1;PACid 16950972;letterCode Ei;letter... 0
Cucsa.003830 46 217
3436
3.2 4 r 1 mRNA Cucsa.003830.1;Name Cucsa.003830.1;PACid 16950973;letterCode E... 0
Cucsa.003840 46 8573
14349
5.8 10 r 1 mRNA Cucsa.003840.1;Name Cucsa.003840.1;PACid 16950974;letterCode E... 0
Cucsa.003850 46 21809
26365
4.6 9 f 2 mRNA Cucsa.003850.1;Name Cucsa.003850.1;PACid 16950975;letterCode E... 0.24 0.4
Cucsa.003860 46 29841
32626
2.8 4 f 1 mRNA Cucsa.003860.1;Name Cucsa.003860.1;PACid 16950977;letterCode E... 0
Cucsa.003870 46 38615
39625
1 0 r 1 mRNA Cucsa.003870.1;Name Cucsa.003870.1;PACid 16950978;letterCode Ei... 0
Cucsa.003880 46 42514
44922
2.4 3 f 1 mRNA Cucsa.003880.1;Name Cucsa.003880.1;PACid 16950979;letterCode E... 0
Cucsa.003890 46 46269
46438
0.2 0 r 1 mRNA Cucsa.003890.1;Name Cucsa.003890.1;PACid 16950980;letterCode Ei... 0
Cucsa.003900 46 49443
51389
1.9 0 f 1 mRNA Cucsa.003900.1;Name Cucsa.003900.1;PACid 16950981;letterCode Ei... 0
Cucsa.003910 46 56358
58898
2.5 5 f 1 mRNA Cucsa.003910.1;Name Cucsa.003910.1;PACid 16950982;letterCode E... 0
Cucsa.003920 46 64111
65410
1.3 2 r 1 mRNA Cucsa.003920.1;Name Cucsa.003920.1;PACid 16950983;letterCode Ei... 0
Cucsa.003930 46 71482
71652
0.2 1 f 1 mRNA Cucsa.003930.1;Name Cucsa.003930.1;PACid 16950984;letterCode Ei... 0
Cucsa.003940 46 88567
90176
1.6 3 r 1 mRNA Cucsa.003940.1;Name Cucsa.003940.1;PACid 16950985;letterCode H... 0
Cucsa.003950 46 93775
100795
7 10 r 6 mRNA Cucsa.003950.1;Name Cucsa.003950.1;PACid 16950986;letterCode E... 0.14 0.14
Cucsa.003960 46 125960
127175
1.2 2 r 1 mRNA Cucsa.003960.1;Name Cucsa.003960.1;PACid 16950992;letterCode E... 0
Cucsa.003970 46 145813
147457
1.6 1 r 1 mRNA Cucsa.003970.1;Name Cucsa.003970.1;PACid 16950993;letterCode E... 0
Cucsa.004170 48 30366
34220
3.9 3 f 1 mRNA Cucsa.004170.1;Name Cucsa.004170.1;PACid 16950994;letterCode H... 0
Cucsa.004180 48 45523
50656
5.1 10 f 1 mRNA Cucsa.004180.1;Name Cucsa.004180.1;PACid 16950995;letterCode Ei... 0
Cucsa.004190 48 69733
71494
1.8 0 f 1 mRNA Cucsa.004190.1;Name Cucsa.004190.1;PACid 16950996;letterCode E... 0.24 0.75
Cucsa.004200 48 93580
99249
5.7 10 r 2 mRNA Cucsa.004200.1;Name Cucsa.004200.1;PACid 16950997;letterCode E... 0
Cucsa.004210 48 104586
106496
1.9 1 r 1 mRNA Cucsa.004210.1;Name Cucsa.004210.1;PACid 16950999;letterCode H... 0
Cucsa.004220 48 130140
130255
0.1 0 f 1 mRNA Cucsa.004220.1;Name Cucsa.004220.1;PACid 16951000;letterCode Ei... 0
Cucsa.004230 48 132621
134279
1.7 1 f 2 mRNA Cucsa.004230.1;Name Cucsa.004230.1;PACid 16951001;letterCode E... 0.89 0.66

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