CrGDB v.0 Loci/Annotations
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| Locus ID |
Gen ome |
Chr | From/To | Len (kb) |
Intron Count |
Str | # Tran |
Locus Description (hover for complete description) |
Gene | Gene Structure Annotation Project | Cov er age  |
Inte grity |
yrGATE Anno Count |
yrGATE Anno Class |
yrGATE Gene Product | Anno Status (click to view) |
Annotate it! |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Cre01.g000050.t1 | 1 | 8846 14517 |
5.7 | 3 | f | 1 | PF02042 AT4G35590.1 RWP-RK domain-containing protein... | 0 | |||||||||
| Cre01.g000100.t1 | 1 | 14676 24737 |
10.1 | 12 | f | 1 | ID=PAC:19866397;Name=Cre01.g000100.t1.2;pacid=19866397;longest=1;Parent=Cre... | 0 | |||||||||
| Cre01.g000150.t1 | 1 | 25206 30447 |
5.2 | 4 | f | 1 | PF02535 PTHR11040 KOG1558 AT2G04032.1 ZIP7 zinc transporter 7 precursor... | 0.07 | 0.27 | ||||||||
| Cre01.g000200.t1 | 1 | 30455 35415 |
5 | 11 | r | 1 | ID=PAC:19865443;Name=Cre01.g000200.t1.2;pacid=19865443;longest=1;Parent=Cre... | 0 | |||||||||
| Cre01.g000250.t1 | 1 | 35490 37905 |
2.4 | 3 | r | 1 | PF09335 PTHR12677 KOG3140 AT1G22850.1 SNARE associated Golgi protein fam... | 0.56 | 0.47 | ||||||||
| Cre01.g000300.t1 | 1 | 38006 41821 |
3.8 | 7 | f | 1 | PF00561 PTHR10992 KOG4409 AT4G24160.1 alpha/beta-Hydrolases superfamily ... | 0.53 | 0.6 | ||||||||
| Cre01.g000350.t1 | 1 | 41876 44605 |
2.7 | 5 | r | 1 | PF00175 AT1G15140.1 FAD/NAD(P)-binding oxidoreductase... | 0.9 | 0.94 | ||||||||
| Cre01.g000400.t1 | 1 | 44660 48785 |
4.1 | 10 | r | 1 | PF03407 PTHR10994:SF5 AT2G35610.1 XEG113 xyloglucanase 113... | 0.1 | 0.15 | ||||||||
| Cre01.g000450.t1 | 1 | 48879 54467 |
5.6 | 8 | f | 1 | PF03407 PTHR10994:SF5 AT2G35610.1 XEG113 xyloglucanase 113... | 0.48 | 0.4 | ||||||||
| Cre01.g000500.t1 | 1 | 54516 61567 |
7.1 | 9 | f | 1 | PF03407 PTHR10994:SF5 AT2G35610.1 XEG113 xyloglucanase 113... | 0.56 | 0.47 | ||||||||
| Cre01.g000550.t1 | 1 | 61716 68167 |
6.5 | 8 | f | 1 | ID=PAC:19866284;Name=Cre01.g000550.t1.1;pacid=19866284;longest=1;Parent=Cre... | 0.05 | 0.12 | ||||||||
| Cre01.g000600.t1 | 1 | 68193 73415 |
5.2 | 10 | r | 1 | PF08154,PF00400 PTHR19848 KOG0271 AT5G52820.1 WD-40 repeat family protei... | 0 | |||||||||
| Cre01.g000650.t1 | 1 | 74046 81977 |
7.9 | 17 | f | 1 | PF02727,PF02728,PF01179 PTHR10638 KOG1186 AT2G42490.1 Copper amine oxida... | 0 | |||||||||
| Cre01.g000700.t1 | 1 | 82010 88635 |
6.6 | 9 | r | 1 | PF00560,PF00097 PTHR22764 KOG1493 AT3G03550.1 RING/U-box superfamily pro... | 0 | |||||||||
| Cre01.g000750.t1 | 1 | 88986 96065 |
7.1 | 10 | r | 1 | PF00097 PTHR12183 KOG3879 AT4G24204.3 RING/U-box superfamily protein... | 0.07 | 0.3 | ||||||||
| Cre01.g000800.t1 | 1 | 96697 99223 |
2.5 | 5 | r | 1 | AT1G78995.1 ... | 1 | 1 | ||||||||
| Cre01.g000850.t1 | 1 | 99704 101705 |
2 | 2 | r | 1 | PF11460 AT3G17930.1 ... | 0.98 | 0.96 | ||||||||
| Cre01.g000900.t1 | 1 | 101826 106034 |
4.2 | 7 | f | 1 | PF07082 AT5G47860.1 Protein of unknown function (DUF1350)... | 0.43 | 0.37 | ||||||||
| Cre01.g000950.t1 | 1 | 106826 111817 |
5 | 7 | f | 1 | PF07690 PTHR10074 AT5G64500.1 Major facilitator superfamily protein... | 0 | |||||||||
| Cre01.g001000.t1 | 1 | 111880 118585 |
6.7 | 9 | r | 1 | ID=PAC:19865272;Name=Cre01.g001000.t1.2;pacid=19865272;longest=1;Parent=Cre... | 0 | |||||||||
| Cre01.g001050.t1 | 1 | 118767 119831 |
1.1 | 0 | f | 1 | ID=PAC:19865915;Name=Cre01.g001050.t1.1;pacid=19865915;longest=1;Parent=Cre... | 1 | 0.79 | ||||||||
| Cre01.g001100.t1 | 1 | 119979 124635 |
4.7 | 8 | r | 1 | ID=PAC:19865066;Name=Cre01.g001100.t1.1;pacid=19865066;longest=1;Parent=Cre... | 0.41 | 0.19 | ||||||||
| Cre01.g001150.t1 | 1 | 124756 138683 |
13.9 | 11 | f | 1 | PTHR10499 ... | 0 | |||||||||
| Cre01.g001200.t1 | 1 | 139266 150347 |
11.1 | 12 | f | 1 | PF00069 PTHR23257 AT3G46920.1 Protein kinase superfamily protein with o... | 0 | |||||||||
| Cre01.g001237.t1 | 1 | 150396 152443 |
2 | 0 | f | 1 | ID=PAC:19866381;Name=Cre01.g001237.t1.1;pacid=19866381;longest=1;Parent=Cre... | 0.99 | 0.76 | ||||||||
| Cre01.g001250.t1 | 1 | 153586 164231 |
10.6 | 4 | f | 1 | ID=PAC:19865395;Name=Cre01.g001250.t1.1;pacid=19865395;longest=1;Parent=Cre... | 0 | |||||||||
| Cre01.g001300.t1 | 1 | 166450 196131 |
29.7 | 39 | f | 1 | PF02415 ... | 0 | 0.1 | ||||||||
| Cre01.g001350.t1 | 1 | 196734 204879 |
8.1 | 16 | r | 1 | PF06472,PF00005 PTHR11384 KOG0060 AT1G54350.1 ABC transporter family pro... | 0 | |||||||||
| Cre01.g001400.t1 | 1 | 204980 210900 |
5.9 | 4 | f | 1 | PTHR10942 KOG4462 3.4.24.- K13539 AT5G42620.2 metalloendopeptidases;zinc i... | 0.12 | 0.14 | ||||||||
| Cre01.g001450.t1 | 1 | 211250 215895 |
4.6 | 5 | f | 1 | PF00612 ... | 0 | |||||||||
| Cre01.g001500.t1 | 1 | 216454 221939 |
5.5 | 10 | r | 1 | ID=PAC:19865772;Name=Cre01.g001500.t1.1;pacid=19865772;longest=1;Parent=Cre... | 0 | |||||||||
| Cre01.g001550.t1 | 1 | 223460 227713 |
4.3 | 6 | f | 1 | PF05198,PF00707 PTHR10938 K02520 AT2G24060.1 Translation initiation fact... | 0.53 | 0.42 | ||||||||
| Cre01.g001600.t1 | 1 | 228680 232076 |
3.4 | 1 | f | 1 | PF00651 PTHR23230 AT5G19330.1 ARIA ARM repeat protein interacting with ... | 0.55 | 0.26 | ||||||||
| Cre01.g001650.t1 | 1 | 232684 237059 |
4.4 | 6 | r | 1 | PF00023 PTHR18958 KOG4214 AT4G19150.1 Ankyrin repeat family protein... | 0 | |||||||||
| Cre01.g001700.t1 | 1 | 275434 283319 |
7.9 | 12 | r | 1 | ID=PAC:19865028;Name=Cre01.g001700.t1.2;pacid=19865028;longest=1;Parent=Cre... | 0 | |||||||||
| Cre01.g001750.t1 | 1 | 287368 294187 |
6.8 | 16 | r | 1 | PF05698 AT5G55220.1 trigger factor type chaperone family protein... | 0.96 | 0.89 | ||||||||
| Cre01.g001800.t1 | 1 | 294290 305391 |
11.1 | 22 | f | 1 | PF00069,PF07714 PTHR22986 KOG0583 2.7.11.1 K08857 AT3G04810.1 ATNEK2,NEK2 N... | 0.07 | 0.11 | ||||||||
| Cre01.g001950.t1 | 1 | 305394 309849 |
4.5 | 6 | r | 1 | ID=PAC:19865917;Name=Cre01.g001950.t1.1;pacid=19865917;longest=1;Parent=Cre... | 0.14 | 0.14 | ||||||||
| Cre01.g002000.t1 | 1 | 310051 314219 |
4.2 | 9 | r | 1 | PF00168 PTHR10774 AT4G34150.1 Calcium-dependent lipid-binding (CaLB dom... | 0.76 | 0.51 | ||||||||
| Cre01.g002050.t1 | 1 | 314370 321231 |
6.9 | 10 | f | 1 | PF00328 PTHR11567 KOG3720 ... | 0 | |||||||||
| Cre01.g002100.t1 | 1 | 321280 325651 |
4.4 | 0 | f | 1 | PF01753 PTHR13244 ... | 0 | |||||||||
| Cre01.g002150.t1 | 1 | 325764 328619 |
2.9 | 2 | r | 1 | ID=PAC:19865286;Name=Cre01.g002150.t1.1;pacid=19865286;longest=1;Parent=Cre... | 0 | |||||||||
| Cre01.g002200.t1 | 1 | 328790 331234 |
2.4 | 5 | f | 1 | PF01192 PTHR10773 KOG3405 K03014 AT5G51940.1 NRPB6A,NRPD6A,NRPE6A RNA poly... | 0 | |||||||||
| Cre01.g002201.t1 | 1 | 331660 337031 |
5.4 | 7 | f | 1 | PF04031 PTHR15002 AT5G12220.1 las1-like family protein... | 0 | |||||||||
| Cre01.g002227.t1 | 1 | 337380 340591 |
3.2 | 8 | f | 1 | ID=PAC:19865126;Name=Cre01.g002227.t1.1;pacid=19865126;longest=1;Parent=Cre... | 0.51 | 0.21 | ||||||||
| Cre01.g002236.t1 | 1 | 340650 344211 |
3.6 | 10 | f | 1 | ID=PAC:19865809;Name=Cre01.g002236.t1.1;pacid=19865809;longest=1;Parent=Cre... | 0 | |||||||||
| Cre01.g002250.t1 | 1 | 344270 348534 |
4.3 | 4 | f | 1 | PF00583 PTHR20958 AT1G26220.1 Acyl-CoA N-acyltransferases (NAT) superfa... | 0.33 | 0.2 | ||||||||
| Cre01.g002300.t1 | 1 | 349195 351451 |
2.3 | 5 | r | 1 | PF00160 PTHR11071 KOG0865 5.2.1.8 K01802 AT2G21130.1 Cyclophilin-like pept... | 1 | 0.96 | ||||||||
| Cre01.g002350.t1 | 1 | 351800 361421 |
9.6 | 11 | f | 1 | PF00899 PTHR10953 KOG2016 K04532 AT1G05180.1 AXR1 NAD(P)-binding Rossmann-... | 0 | |||||||||
| Cre01.g002400.t1 | 1 | 362001 365705 |
3.7 | 5 | r | 1 | PF01764 AT4G13550.1 triglyceride lipases;triglyceride lipases... | 0 | |||||||||
| Cre01.g002450.t1 | 1 | 420050 421695 |
1.6 | 4 | r | 1 | PF00168 PTHR15015:SF7 AT1G53590.1 NTMC2T6.1,NTMC2TYPE6.1 Calcium-depende... | 0 | |||||||||
| Cre01.g002500.t1 | 1 | 422084 425762 |
3.7 | 7 | r | 1 | ID=PAC:19865316;Name=Cre01.g002500.t1.1;pacid=19865316;longest=1;Parent=Cre... | 1 | 0.96 | ||||||||
| Cre01.g002550.t1 | 1 | 425906 432461 |
6.6 | 8 | f | 1 | PF00069 PTHR22985 KOG0598 AT1G30640.1 Protein kinase family protein... | 0 | |||||||||
| Cre01.g002600.t1 | 1 | 433076 436507 |
3.4 | 2 | f | 1 | ID=PAC:19865733;Name=Cre01.g002600.t1.1;pacid=19865733;longest=1;Parent=Cre... | 0 | |||||||||
| Cre01.g002650.t1 | 1 | 437196 440157 |
3 | 1 | f | 1 | ID=PAC:19866091;Name=Cre01.g002650.t1.1;pacid=19866091;longest=1;Parent=Cre... | 0 | |||||||||
| Cre01.g002700.t1 | 1 | 440216 449153 |
8.9 | 13 | f | 1 | PF00400 PTHR13083 KOG1333 ... | 0 | |||||||||
| Cre01.g002750.t1 | 1 | 449206 453677 |
4.5 | 8 | f | 1 | ID=PAC:19865097;Name=Cre01.g002750.t1.1;pacid=19865097;longest=1;Parent=Cre... | 0 | |||||||||
| Cre01.g002800.t1 | 1 | 455716 498267 |
42.6 | 114 | f | 1 | PF00530,PF01839,PF00704,PF00059 PTHR11177 KOG2806 AT4G19800.1 Glycosyl h... | 0.02 | 0.1 | ||||||||
| Cre01.g002850.t1 | 1 | 498316 507847 |
9.5 | 24 | f | 1 | ID=PAC:19866116;Name=Cre01.g002850.t1.2;pacid=19866116;longest=1;Parent=Cre... | 0.08 | 0.18 | ||||||||
| Cre01.g002900.t1 | 1 | 507970 509625 |
1.7 | 3 | r | 1 | ID=PAC:19865158;Name=Cre01.g002900.t1.1;pacid=19865158;longest=1;Parent=Cre... | 0 | |||||||||
| Cre01.g002950.t1 | 1 | 509690 514025 |
4.3 | 5 | r | 1 | PF06677 KOG4537 ... | 0 | |||||||||
| Cre01.g003000.t1 | 1 | 514176 518757 |
4.6 | 7 | f | 1 | ID=PAC:19865602;Name=Cre01.g003000.t1.2;pacid=19865602;longest=1;Parent=Cre... | 0 | |||||||||
| Cre01.g003050.t1 | 1 | 519040 529385 |
10.3 | 18 | r | 1 | PF04048 PTHR14146 K06111 AT3G10380.1 ATSEC8,SEC8 subunit of exocyst compl... | 0 | |||||||||
| Cre01.g003100.t1 | 1 | 529626 533737 |
4.1 | 11 | f | 1 | PF00226,PF00643,PF07649 PTHR11821 AT2G21510.1 DNAJ heat shock N-termina... | 0 | |||||||||
| Cre01.g003150.t1 | 1 | 534390 540455 |
6.1 | 10 | r | 1 | ID=PAC:19865370;Name=Cre01.g003150.t1.1;pacid=19865370;longest=1;Parent=Cre... | 0 | |||||||||
| Cre01.g003200.t1 | 1 | 540616 544427 |
3.8 | 7 | f | 1 | PF01408 PTHR22604 1.1.1.179,1.3.1.20 K00078 AT4G09670.1 Oxidoreductase fa... | 0 | |||||||||
| Cre01.g003250.t1 | 1 | 544646 547007 |
2.4 | 3 | f | 1 | PF07282 ... | 0.4 | 0.58 | ||||||||
| Cre01.g003300.t1 | 1 | 547224 552628 |
5.4 | 12 | f | 1 | PF01094 ... | 0 | |||||||||
| Cre01.g003350.t1 | 1 | 552708 554833 |
2.1 | 3 | r | 1 | PF00249 PTHR11821:SF29 AT5G06110.1 DnaJ domain ;Myb-like DNA-binding do... | 0 | |||||||||
| Cre01.g003400.t1 | 1 | 592608 596473 |
3.9 | 8 | r | 1 | PF00226 PTHR11821 KOG0724 K09522 AT5G06110.1 DnaJ domain ;Myb-like DNA-bi... | 0 | |||||||||
| Cre01.g003450.t1 | 1 | 596594 601625 |
5 | 5 | f | 1 | ID=PAC:19865498;Name=Cre01.g003450.t1.2;pacid=19865498;longest=1;Parent=Cre... | 0.12 | 0.14 | ||||||||
| Cre01.g003500.t1 | 1 | 602224 628135 |
25.9 | 31 | f | 1 | PF05188 K08735 AT3G18524.1 ATMSH2,MSH2 MUTS homolog 2... | 0 | |||||||||
| Cre01.g003519.t1 | 1 | 628474 630105 |
1.6 | 2 | f | 1 | ID=PAC:19866412;Name=Cre01.g003519.t1.1;pacid=19866412;longest=1;Parent=Cre... | 0 | |||||||||
| Cre01.g003540.t1 | 1 | 657094 658240 |
1.1 | 0 | f | 1 | ID=PAC:19865605;Name=Cre01.g003540.t1.1;pacid=19865605;longest=1;Parent=Cre... | 0 | |||||||||
| Cre01.g003550.t1 | 1 | 661258 668103 |
6.8 | 9 | r | 1 | PF00581 KOG1530 AT4G27700.1 Rhodanese/Cell cycle control phosphatase su... | 0.15 | 0.14 | ||||||||
| Cre01.g003600.t1 | 1 | 669634 671143 |
1.5 | 0 | f | 1 | ID=PAC:19865760;Name=Cre01.g003600.t1.1;pacid=19865760;longest=1;Parent=Cre... | 0.75 | 0.8 | ||||||||
| Cre01.g003620.t1 | 1 | 673454 675097 |
1.6 | 1 | f | 1 | ID=PAC:19865322;Name=Cre01.g003620.t1.1;pacid=19865322;longest=1;Parent=Cre... | 0.44 | 0.23 | ||||||||
| Cre01.g003650.t1 | 1 | 675278 681524 |
6.2 | 8 | r | 1 | ID=PAC:19865841;Name=Cre01.g003650.t1.2;pacid=19865841;longest=1;Parent=Cre... | 0.38 | 0.41 | ||||||||
| Cre01.g003700.t1 | 1 | 682184 689715 |
7.5 | 6 | f | 1 | PF10263 PTHR23099 KOG3854 ... | 0 | |||||||||
| Cre01.g003750.t1 | 1 | 690824 709435 |
18.6 | 7 | f | 1 | PTHR10217 ... | 0 | |||||||||
| Cre01.g003800.t1 | 1 | 710404 721255 |
10.9 | 7 | f | 1 | PF07714,PF00069 PTHR23257 AT3G06620.1 PAS domain-containing protein tyr... | 0.05 | 0.12 | ||||||||
| Cre01.g003850.t1 | 1 | 723014 730637 |
7.6 | 13 | f | 1 | PF00067 PTHR19383 KOG0157 AT2G44890.1 CYP704A1 cytochrome P450, family 70... | 0 | |||||||||
| Cre01.g003900.t1 | 1 | 730684 732438 |
1.8 | 0 | f | 1 | ID=PAC:19865379;Name=Cre01.g003900.t1.1;pacid=19865379;longest=1;Parent=Cre... | 0.37 | 0.8 | ||||||||
| Cre01.g003950.t1 | 1 | 733795 752397 |
18.6 | 50 | r | 1 | ID=PAC:19865334;Name=Cre01.g003950.t1.2;pacid=19865334;longest=1;Parent=Cre... | 0.3 | 0.32 | ||||||||
| Cre01.g004000.t1 | 1 | 752454 756437 |
4 | 7 | r | 1 | PF08855 ... | 0.95 | 0.98 | ||||||||
| Cre01.g004050.t1 | 1 | 764478 766776 |
2.3 | 2 | f | 1 | ID=PAC:19866085;Name=Cre01.g004050.t1.1;pacid=19866085;longest=1;Parent=Cre... | 0 | 0.1 | ||||||||
| Cre01.g004100.t1 | 1 | 767588 769219 |
1.6 | 1 | f | 1 | ID=PAC:19865680;Name=Cre01.g004100.t1.2;pacid=19865680;longest=1;Parent=Cre... | 0 | |||||||||
| Cre01.g004124.t1 | 1 | 769358 788999 |
19.6 | 48 | f | 1 | ID=PAC:19865387;Name=Cre01.g004124.t1.2;pacid=19865387;longest=1;Parent=Cre... | 0.31 | 0.3 | ||||||||
| Cre01.g004150.t1 | 1 | 792358 795925 |
3.6 | 9 | f | 1 | ID=PAC:19865021;Name=Cre01.g004150.t1.2;pacid=19865021;longest=1;Parent=Cre... | 0 | |||||||||
| Cre01.g004157.t1 | 1 | 795988 810983 |
15 | 35 | f | 1 | ID=PAC:19865375;Name=Cre01.g004157.t1.1;pacid=19865375;longest=1;Parent=Cre... | 0.3 | 0.33 | ||||||||
| Cre01.g004200.t1 | 1 | 811142 817704 |
6.6 | 12 | r | 1 | ID=PAC:19866248;Name=Cre01.g004200.t1.1;pacid=19866248;longest=1;Parent=Cre... | 0.42 | 0.48 | ||||||||
| Cre01.g004250.t1 | 1 | 817835 819339 |
1.5 | 3 | f | 1 | PF03645 PTHR21255 KOG4081 K10420 ... | 1 | 0.98 | ||||||||
| Cre01.g004300.t1 | 1 | 819341 826093 |
6.8 | 13 | r | 1 | PF00310,PF00733 PTHR11772 KOG0571 6.3.5.4 K01953 AT3G47340.1 ASN1,AT-ASN1,D... | 1 | 0.97 | ||||||||
| Cre01.g004350.t1 | 1 | 826218 835623 |
9.4 | 19 | f | 1 | PF03097 PTHR23030 KOG2220 K12200 AT1G15130.1 Endosomal targeting BRO1-lik... | 0.15 | 0.17 | ||||||||
| Cre01.g004400.t1 | 1 | 837328 838979 |
1.7 | 3 | f | 1 | ID=PAC:19865413;Name=Cre01.g004400.t1.1;pacid=19865413;longest=1;Parent=Cre... | 0.84 | 0.95 | ||||||||
| Cre01.g004450.t1 | 1 | 838982 842375 |
3.4 | 9 | r | 1 | PF07466 AT1G54520.1 ... | 1 | 0.98 | ||||||||
| Cre01.g004500.t1 | 1 | 842508 849341 |
6.8 | 11 | f | 1 | PF00330 PTHR11670 KOG0454 4.2.1.33,4.2.1.35 K01703 AT4G13430.1 ATLEUC1,IIL1... | 1 | 0.92 | ||||||||
| Cre01.g004550.t1 | 1 | 849638 855892 |
6.3 | 7 | f | 1 | PF07647,PF00536 KOG4375 ... | 0.29 | 0.52 | ||||||||
| Cre01.g004600.t1 | 1 | 857278 870169 |
12.9 | 5 | f | 1 | PF02042 KOG3866 AT5G53040.1 RWP-RK domain-containing protein... | 0.22 | 0.14 | ||||||||
| Cre01.g004650.t1 | 1 | 870848 872461 |
1.6 | 1 | f | 1 | ID=PAC:19864909;Name=Cre01.g004650.t1.1;pacid=19864909;longest=1;Parent=Cre... | 1 | 1 |