Zea mays (Zm)
1. Small nuclear Ribonucleoprotein (snRNP)
Group |
CIWOG |
Gene |
hHomologs |
SeHomologs |
Gene Name |
Chr |
str |
from |
to |
Txn |
Domains |
Transcripts |
|
1.1 | 108 | GRMZM2G076399_T01 | SmD2 | zmSmD2-1 | 6 | r | 30863799 | 30866208 | Sm 1 | ||||
1.1 | 108 | GRMZM2G076399_T03 | SmD2 | zmSmD2-1 | 6 | r | 30864378 | 30866208 | Sm 1 | ||||
1.1 | 108 | GRMZM2G076399_T04 | SmD2 | zmSmD2-1 | 6 | r | 30863972 | 30866144 | Sm 1 | ||||
1.1 | 108 | GRMZM2G166985_T01 | SmD2 | zmSmD2-2 | 10 | f | 130455187 | 130458414 | Sm 1 | ||||
1.1 | 108 | GRMZM2G166985_T02 | SmD2 | zmSmD2-2 | 10 | f | 130455202 | 130458388 | Sm 1 | ||||
1.1 | 108 | GRMZM2G166985_T03 | SmD2 | zmSmD2-2 | 10 | f | 130455497 | 130458388 | Sm 1 | ||||
1.1 | 108 | GRMZM2G171372_T01 | SmD2 | zmSmD2-3 | 2 | f | 27955856 | 27958777 | Sm 1 | ||||
1.1 | 108 | GRMZM2G171372_T02 | SmD2 | zmSmD2-3 | 2 | f | 27955856 | 27958507 | Sm 1 | ||||
1.1 | 108 | GRMZM2G171372_T03 | SmD2 | zmSmD2-3 | 2 | f | 27955856 | 27958507 | Sm 1 | ||||
1.1 | 147 | GRMZM2G027571_T01 | SmD1 | SmD1 | zmSmD1-a1 | 2 | f | 39885356 | 39887484 | Sm 1 | |||
1.1 | 147 | GRMZM2G027571_T02 | SmD1 | SmD1 | zmSmD1-a1 | 2 | f | 39885356 | 39887484 | Sm 1 | |||
1.1 | 147 | GRMZM2G173649_T05 | SmD1 | SmD1 | zmSmD1-a2 | 10 | r | 123997973 | 124000653 | Sm 1 | |||
1.1 | 147 | GRMZM2G416061_T02 | SmD1 | SmD1 | zmSmD1-a3 | 4 | f | 126477351 | 126480579 | Sm 1 | |||
1.1 | 147 | GRMZM2G416061_T04 | SmD1 | SmD1 | zmSmD1-a3 | 4 | f | 126477351 | 126479963 | Sm 1 | |||
1.1 | 181 | GRMZM2G014091_T01 | SmE | SmE | zmSmE-a1 | 8 | r | 24437994 | 24457562 | Sm 1 | |||
1.1 | 181 | GRMZM2G386608_T01 | SmE | SmE | zmSmE-a2 | 3 | f | 3459158 | 3463198 | Sm 1 | |||
1.1 | 181 | GRMZM2G386608_T03 | SmE | SmE | zmSmE-a2 | 3 | f | 3459158 | 3462166 | Sm 1 | |||
1.1 | 221 | GRMZM2G038606_T01 | LSM4 | LSm4 | zmLSM4-1 | 3 | r | 36132958 | 36137604 | Sm 1 | |||
1.1 | 221 | GRMZM2G038606_T02 | LSM4 | LSm4 | zmLSM4-1 | 3 | r | 36132958 | 36137604 | Sm 1 | |||
1.1 | 221 | GRMZM2G095114_T01 | LSM4 | LSm4 | zmLSM4-2 | 8 | f | 4982803 | 4992156 | Sm 1 | |||
1.1 | 336 | GRMZM2G021149_T01 | SmB | SmB1 | zmSmB-a1 | 7 | f | 7841229 | 7842177 | Sm 1 | |||
1.1 | 336 | GRMZM2G022041_T01 | SmB | SmB1 | zmSmB-a2 | 2 | r | 230785010 | 230787894 | Sm 1 | |||
1.1 | 344 | GRMZM2G115176_T01 | SmD3 | SmD3 | zmSmD3-b1 | 5 | r | 66140008 | 66143019 | Sm 1 | |||
1.1 | 344 | GRMZM2G115176_T03 | SmD3 | SmD3 | zmSmD3-b1 | 5 | r | 66141133 | 66143019 | Sm 1 | |||
1.1 | 344 | GRMZM2G115925_T01 | SmD3 | SmD3 | zmSmD3-b2 | 9 | r | 139187032 | 139191411 | Sm 1 | |||
1.1 | 469 | GRMZM2G057865_T01 | SmG | SmG | zmSmG-a | 9 | f | 118657468 | 118660592 | Sm 1 | |||
1.1 | 472 | GRMZM2G016097_T01 | LSM7 | LSm7 | zmLSM7-1 | 10 | f | 143949730 | 143956584 | Sm 1 | |||
1.1 | 472 | GRMZM2G106105_T01 | LSM7 | LSm7 | zmLSM7-2 | 2 | r | 6948595 | 6951278 | Sm 1 | |||
1.1 | 479 | GRMZM2G063322_T01 | LSM2 | LSm2 | zmLSM2-1 | 10 | r | 79917087 | 79928102 | Sm 1 | |||
1.1 | 479 | GRMZM2G092535_T01 | LSM2 | LSm2 | zmLSM2-2 | 4 | r | 33278523 | 33282579 | Sm 1 | |||
1.1 | 539 | GRMZM2G014300_T01 | LSM5 | LSm5 | zmLSM5/SAD1-1 | 6 | r | 143500277 | 143503351 | Sm 1 | |||
1.1 | 539 | GRMZM2G014300_T02 | LSM5 | LSm5 | zmLSM5/SAD1-1 | 6 | r | 143500286 | 143503351 | Sm 1 | |||
1.1 | 539 | GRMZM2G049013_T01 | LSM5 | LSm5 | zmLSM5/SAD1-2 | 8 | f | 112248655 | 112250918 | Sm 1 | |||
1.1 | 539 | GRMZM2G049013_T02 | LSM5 | LSm5 | zmLSM5/SAD1-2 | 8 | f | 112248663 | 112250883 | Sm 1 | |||
1.1 | 540 | GRMZM2G058252_T01 | SmF | SmF | zmSmF-1 | 5 | r | 88604151 | 88607221 | Sm 1 | |||
1.1 | 540 | GRMZM2G168252_T01 | SmF | SmF | zmSmF-2 | 4 | r | 240866040 | 240868886 | Sm 1 | |||
1.1 | 545 | GRMZM2G092429_T02 | LSM1 | LSm1 | zmLSM1b | 10 | f | 119714795 | 119719455 | Sm 1 | |||
1.1 | 548 | GRMZM2G159675_T02 | LSM6 | LSm6 | zmLSM6a | 10 | r | 109548250 | 109556493 | Sm 1 | |||
1.1 | 550 | GRMZM2G320379_T01 | LSM8 | LSm8 | zmLSM8 | 6 | f | 162768229 | 162773309 | Sm 1 | |||
1.1 | 561 | AC155610.2_FGT009 | LSM3 | LSm3 | zmLSM3a | 3 | f | 173993722 | 173993922 | Sm 1 | |||
1.2 | 92 | GRMZM2G028096_T02 | Luc7 | zmLuc7a | 5 | r | 181751942 | 181758352 | DUF259 1 | ||||
1.2 | 92 | GRMZM2G028096_T04 | Luc7 | zmLuc7a | 5 | r | 181751976 | 181758352 | DUF259 1 | ||||
1.2 | 92 | GRMZM2G069916_T01 | Luc7 | zmLuc7b | 5 | f | 1318949 | 1326711 | DUF259 1 | ||||
1.2 | 92 | GRMZM2G069916_T02 | Luc7 | zmLuc7b | 5 | f | 1318949 | 1326711 | DUF259 1 | ||||
1.2 | 92 | GRMZM2G069916_T03 | Luc7 | zmLuc7b | 5 | f | 1318949 | 1326711 | DUF259 1 | ||||
1.2 | 92 | GRMZM2G069916_T04 | Luc7 | zmLuc7b | 5 | f | 1319034 | 1326711 | DUF259 1 | ||||
1.2 | 92 | GRMZM2G069916_T05 | Luc7 | zmLuc7b | 5 | f | 1318949 | 1326700 | DUF259 1 | ||||
1.2 | 92 | GRMZM2G118014_T01 | Luc7 | zmLuc7c | 1 | r | 295928049 | 295934046 | DUF259 1 | ||||
1.2 | 92 | GRMZM2G118014_T02 | Luc7 | zmLuc7c | 1 | r | 295928054 | 295934046 | DUF259 1 | ||||
1.2 | 92 | GRMZM2G118014_T04 | Luc7 | zmLuc7c | 1 | r | 295928267 | 295934046 | DUF259 1 | ||||
1.2 | 92 | GRMZM2G118014_T05 | Luc7 | zmLuc7c | 1 | r | 295928267 | 295934046 | DUF259 1 | ||||
1.2 | 208 | GRMZM2G178294_T01 | Prp39 | zmPrp39a | 9 | f | 143027379 | 143037967 | HAT 7; TPR-like 1 | ||||
1.2 | 208 | GRMZM2G178294_T02 | Prp39 | zmPrp39a | 9 | f | 143027379 | 143037967 | HAT 7; TPR-like 1 | ||||
1.2 | 208 | GRMZM2G178294_T04 | Prp39 | zmPrp39a | 9 | f | 143027379 | 143036608 | HAT 7; TPR-like 1 | ||||
1.2 | 403 | GRMZM2G113592_T01 | U1-70K | Snp1 | zmU1-70K | 5 | r | 40079055 | 40084203 | RRM 1 | |||
1.2 | 403 | GRMZM2G113592_T02 | U1-70K | Snp1 | zmU1-70K | 5 | r | 40079071 | 40084256 | RRM 1 | |||
1.2 | 403 | GRMZM2G113592_T03 | U1-70K | Snp1 | zmU1-70K | 5 | r | 40081012 | 40084203 | RRM 1 | |||
1.2 | 463 | GRMZM2G413193_T01 | U1C_Subunit | Yhc1 | zmU1C | 4 | r | 229513297 | 229518360 | C2H2 1; mrCtermi 3 | |||
1.2 | 463 | GRMZM2G413193_T02 | U1C_Subunit | Yhc1 | zmU1C | 4 | r | 229513498 | 229518360 | C2H2 1; mrCtermi 3 | |||
1.2 | 463 | GRMZM2G413193_T03 | U1C_Subunit | Yhc1 | zmU1C | 4 | r | 229514770 | 229518360 | C2H2 1; mrCtermi 3 | |||
1.2 | 475 | GRMZM2G075767_T01 | FBP11 | Prp40 | zmPrp40a | 3 | f | 226499645 | 226526192 | WW 2; FF 5 | |||
1.2 | 475 | GRMZM2G075767_T02 | FBP11 | Prp40 | zmPrp40a | 3 | f | 226499645 | 226524499 | WW 2; FF 5 | |||
1.2 | 475 | GRMZM2G075767_T03 | FBP11 | Prp40 | zmPrp40a | 3 | f | 226499645 | 226512800 | WW 2; FF 5 | |||
1.2 | 538 | GRMZM2G177842_T01 | Related_to_Luc7-like | Luc7 | zmLuc7-rl | 7 | r | 44937258 | 44940539 | DUF259 1 | |||
1.2 | 981 | GRMZM2G018020_T01 | U1A_Subunit | Mud1 | zmU1A | 6 | r | 127453237 | 127456600 | RRM 2 | |||
1.2 | 1097 | GRMZM2G308713_T01 | Prp39 | zmPrp39b | 1 | f | 219128644 | 219141472 | HAT 4 | ||||
1.3 | 170 | GRMZM2G028156_T01 | SF3a120/SAP114_Subun | Prp21p | zmSAP114-1a-1 | 8 | r | 4061932 | 4064877 | SWAP/Surp 2 | |||
1.3 | 170 | GRMZM2G431306_T01 | SF3a120/SAP114_Subun | Prp21p | zmSAP114-1a-2 | 3 | r | 39140361 | 39143861 | SWAP/Surp 2 | |||
1.3 | 170 | GRMZM2G431306_T02 | SF3a120/SAP114_Subun | Prp21p | zmSAP114-1a-2 | 3 | r | 39140361 | 39143861 | SWAP/Surp 2 | |||
1.3 | 170 | GRMZM2G431306_T03 | SF3a120/SAP114_Subun | Prp21p | zmSAP114-1a-2 | 3 | r | 39140864 | 39143861 | SWAP/Surp 2 | |||
1.3 | 203 | GRMZM2G117346_T01 | SF3b160/SAP155_Subun | Hsh155 | zmSAP155-1 | 4 | r | 243288772 | 243294681 | HEAT 1; ARM 2; SAP | |||
1.3 | 203 | GRMZM2G117346_T02 | SF3b160/SAP155_Subun | Hsh155 | zmSAP155-1 | 4 | r | 243288772 | 243294669 | HEAT 1; ARM 2; SAP | |||
1.3 | 203 | GRMZM2G410393_T01 | SF3b160/SAP155_Subun | Hsh155 | zmSAP155-2 | 5 | f | 78117189 | 78123998 | HEAT 1; ARM 2; SAP | |||
1.3 | 203 | GRMZM2G410393_T03 | SF3b160/SAP155_Subun | Hsh155 | zmSAP155-2 | 5 | f | 78117189 | 78123914 | HEAT 1; ARM 2; SAP | |||
1.3 | 203 | GRMZM2G410393_T04 | SF3b160/SAP155_Subun | Hsh155 | zmSAP155-2 | 5 | f | 78117189 | 78123914 | HEAT 1; ARM 2; SAP | |||
1.3 | 203 | GRMZM2G410393_T05 | SF3b160/SAP155_Subun | Hsh155 | zmSAP155-2 | 5 | f | 78117189 | 78123914 | HEAT 1; ARM 2; SAP | |||
1.3 | 222 | GRMZM2G132060_T01 | SF3b150/SAP145_Subun | Cus1p | zmSF3b150 | 5 | r | 64520567 | 64525172 | PSP 1; DUF382 1 | |||
1.3 | 222 | GRMZM2G132060_T02 | SF3b150/SAP145_Subun | Cus1p | zmSF3b150 | 5 | r | 64520801 | 64525101 | PSP 1; DUF382 1 | |||
1.3 | 228 | GRMZM2G047018_T02 | SF3b_14b/PHP5A | Rds3p | zmSF3b_14b/PHP5A-a-1 | 2 | f | 3380434 | 3382741 | UPF0123 1 | |||
1.3 | 228 | GRMZM2G047018_T03 | SF3b_14b/PHP5A | Rds3p | zmSF3b_14b/PHP5A-a-1 | 2 | f | 3380480 | 3382741 | UPF0123 1 | |||
1.3 | 228 | GRMZM2G047018_T04 | SF3b_14b/PHP5A | Rds3p | zmSF3b_14b/PHP5A-a-1 | 2 | f | 3382041 | 3382718 | UPF0123 1 | |||
1.3 | 228 | GRMZM2G456086_T01 | SF3b_14b/PHP5A | Rds3p | zmSF3b_14b/PHP5A-a-2 | 7 | r | 9254796 | 9258732 | UPF0123 1 | |||
1.3 | 256 | GRMZM2G078592_T01 | SF3b120/SAP130_Subun | Rse1p | zmSAP130a-1 | 3 | r | 228213177 | 228216693 | CPSF_A 1; WD40-like | |||
1.3 | 256 | GRMZM2G096972_T01 | SF3b120/SAP130_Subun | Rse1p | zmSAP130a-2 | 5 | f | 76408688 | 76413874 | CPSF_A 1; WD40-like | |||
1.3 | 347 | GRMZM2G007590_T01 | U2B''_Subunit | Msl1p | zmU2B''a | 9 | f | 132506597 | 132514682 | RRM 2 | |||
1.3 | 347 | GRMZM2G153450_T01 | U2B''_Subunit | Msl1p | zmU2B''b | 1 | r | 46753287 | 46758123 | RRM 2 | |||
1.3 | 412 | GRMZM2G021742_T01 | U2A'_Subunit | Lea1p | zmU2A | 1 | f | 297311505 | 297315882 | LRR 4 | |||
1.3 | 460 | GRMZM2G107745_T01 | p14 | Snu17p | zmP14-1a | 1 | f | 290898675 | 290899685 | RRM 1 | |||
1.3 | 460 | GRMZM2G358416_T01 | p14 | Snu17p | zmP14-1b | 5 | r | 3087460 | 3088562 | RRM 1 | |||
1.3 | 461 | GRMZM2G178227_T01 | p14 | Snu17p | zmSAP61 | 3 | r | 206506155 | 206531917 | C2H2 1 | |||
1.3 | 461 | GRMZM2G178227_T02 | p14 | Snu17p | zmSAP61 | 3 | r | 206509499 | 206531917 | C2H2 1 | |||
1.3 | 466 | GRMZM2G121942_T01 | SF3b_10 | zmSF3b10a | 4 | r | 67680730 | 67687247 | SF3b10 1 | ||||
1.3 | 466 | GRMZM2G121942_T03 | SF3b_10 | zmSF3b10a | 4 | r | 67685104 | 67687247 | SF3b10 1 | ||||
1.3 | 470 | GRMZM2G102639_T01 | SF3b53/SAP49_Subunit | Hsh49p | zmSAP49a-1 | 5 | r | 30492386 | 30496807 | RRM 2 | |||
1.3 | 470 | GRMZM2G170699_T01 | SF3b53/SAP49_Subunit | Hsh49p | zmSAP49a-2 | 1 | r | 234784881 | 234789184 | RRM 2 | |||
1.3 | 758 | GRMZM2G307906_T01 | SF3a66/SAP62_Subunit | Prp11p | zmSAP62 | 9 | f | 136569142 | 136573643 | C2H2 1 | |||
1.4 | 44 | AC203173.3_FGT004 | 116kD_Subunit/elonga | Snu114p | zmU5-116-2a | 8 | r | 173945996 | 173949357 | EFG_C 1; GTP_EFTU | |||
1.4 | 44 | GRMZM2G040369_T01 | 116kD_Subunit/elonga | Snu114p | zmU5-116-2b | 1 | f | 295361311 | 295365621 | EFG_C 1; GTP_EFTU | |||
1.4 | 44 | GRMZM2G040369_T02 | 116kD_Subunit/elonga | Snu114p | zmU5-116-2b | 1 | f | 295361311 | 295365531 | EFG_C 1; GTP_EFTU | |||
1.4 | 44 | GRMZM2G095851_T01 | 116kD_Subunit/elonga | Snu114p | zmU5-116-2c | 1 | f | 295227808 | 295232118 | EFG_C 1; GTP_EFTU | |||
1.4 | 44 | GRMZM2G095851_T02 | 116kD_Subunit/elonga | Snu114p | zmU5-116-2c | 1 | f | 295227808 | 295232028 | EFG_C 1; GTP_EFTU | |||
1.4 | 44 | GRMZM2G113250_T01 | 116kD_Subunit/elonga | Snu114p | zmU5-116-2d | 1 | r | 295144335 | 295149316 | EFG_C 1; GTP_EFTU | |||
1.4 | 75 | GRMZM2G026991_T01 | 200kD_Subunit/Helica | Brr2p | zmU5-200 | 7 | r | 163199153 | 163207800 | DEAD 1; Helicase_C | |||
1.4 | 182 | GRMZM2G099355_T01 | 220kD_Subunit | Prp8p | zmU5-220/Prp8a-1 | 9 | f | 16009953 | 16020142 | Mov34 1 | |||
1.4 | 182 | GRMZM2G433801_T01 | 220kD_Subunit | Prp8p | zmU5-220/Prp8a-2 | 6 | r | 79025237 | 79041724 | Mov34 1 | |||
1.4 | 259 | GRMZM2G057394_T01 | 100kD_Subunit | Prp28p | zmU5-100KD-1 | 1 | r | 265992956 | 265995794 | DEAD 1; Helicase_C | |||
1.4 | 259 | GRMZM2G057394_T02 | 100kD_Subunit | Prp28p | zmU5-100KD-1 | 1 | r | 265993112 | 265996022 | DEAD 1; Helicase_C | |||
1.4 | 259 | GRMZM2G123459_T01 | 100kD_Subunit | Prp28p | zmU5-100KD-2 | 5 | f | 11557864 | 11560488 | DEAD 1; Helicase_C | |||
1.4 | 402 | GRMZM2G049902_T01 | 102KD/Prp6-like | Prp6p | zmU5-102KD-1 | 3 | r | 129706635 | 129710154 | Ubiquitin 1; TPR 3 | |||
1.4 | 402 | GRMZM2G401561_T01 | 102KD/Prp6-like | Prp6p | zmU5-102KD-2 | 10 | r | 27481000 | 27484015 | Ubiquitin 1; TPR 3 | |||
1.4 | 405 | GRMZM2G134982_T01 | 116kD_Subunit/elonga | Snu114p | zmU5-116-3 | 1 | r | 259266501 | 259270079 | EFG_C 1; GTP_EFTU | |||
1.4 | 413 | GRMZM2G316232_T01 | 116kD_Subunit/elonga | Snu114p | zmU5-116-1a | 9 | r | 89073601 | 89076524 | EFG_C 1; GTP_EFTU 1 | |||
1.4 | 637 | GRMZM2G108277_T01 | 15kD_Subunit | Dib1p | zmU5-15 | 1 | f | 218069056 | 218071987 | DIMI 1; Thioredoxin | |||
1.4 | 755 | GRMZM2G089857_T01 | 40kD_Subunit | zmU5-40 | 6 | f | 95637763 | 95640908 | WD-40 7 | ||||
1.4 | 1099 | GRMZM2G346278_T01 | 200kD_Subunit/Helica | Brr2p | zmU5-200-3 | 4 | f | 139104530 | 139128463 | DEAD 1; Sec63 1; Ru | |||
1.5 | 223 | GRMZM2G140799_T01 | U4/U6-15.5K | Snu13p | zmTri15.5-1a | 9 | f | 138963196 | 138965588 | Ribosomal_L7Ae 1 | |||
1.5 | 260 | GRMZM2G003307_T01 | U4/U6-61KD | Prp31 | zmU5-61/Prp31a | 2 | r | 18957596 | 18961570 | Nop 1 | |||
1.5 | 260 | GRMZM2G003307_T02 | U4/U6-61KD | Prp31 | zmU5-61/Prp31a | 2 | r | 18957596 | 18961549 | Nop 1 | |||
1.5 | 411 | GRMZM2G375172_T01 | U4/U6-90K/SAP90 | Prp3p | zmSAP90-1 | 5 | f | 139585850 | 139590643 | ||||
1.5 | 756 | GRMZM2G101689_T01 | U4/U6-60K/SAP60 | Prp4p | zmSAP60 | 1 | f | 60926894 | 60931182 | WD-40 7;SFM 1;WD40 | |||
1.6 | 399 | GRMZM2G109284_T01 | Tri-110KD | SAD1 | zmTri110 | 3 | r | 143934248 | 143941600 | SART-1 1 | |||
1.6 | 633 | GRMZM2G097593_T01 | (U4/U6.U5) | Tri-27kD/RY1 | zmTri-27kD/RY1 | 7 | f | 160546021 | 160555984 | ||||
1.6 | 633 | GRMZM2G097593_T02 | (U4/U6.U5) | Tri-27kD/RY1 | zmTri-27kD/RY1 | 7 | f | 160546021 | 160555422 | ||||
1.6 | 638 | GRMZM2G091151_T01 | Tri-65_KD | Snu66p | zmTri65a | 5 | f | 48821841 | 48826206 | UCH 1; ZnF_UBP 1 | |||
1.6 | 753 | GRMZM2G051458_T01 | hSnu23/FLJ31121 | Snu23p | zmSnu23 | 3 | r | 8344676 | 8348540 | ZnF_U1 1 | |||
1.7 | 225 | GRMZM2G047321_T01 | U11/U12-25K | (-99_protein) | zmU11/U12-25K | 2 | r | 3377242 | 3380661 | C2H2 1 | |||
1.7 | 346 | GRMZM2G042615_T01 | U11/U12-65K | zmU11/U12-65K | 1 | r | 53427593 | 53433139 | RRM 2;PHOSPHOPANTET | ||||
1.7 | 346 | GRMZM2G042615_T02 | U11/U12-65K | zmU11/U12-65K | 1 | r | 53427188 | 53433135 | RRM 2;PHOSPHOPANTET | ||||
1.7 | 346 | GRMZM2G042615_T03 | U11/U12-65K | zmU11/U12-65K | 1 | r | 53427675 | 53433133 | RRM 2;PHOSPHOPANTET | ||||
1.7 | 982 | GRMZM2G301536_T01 | U11/U12-35K | zmU11/U12-35kD | 7 | r | 133445653 | 133449549 | RRM 1 | ||||
1.7 | 1101 | GRMZM2G053223_T01 | U11/U12-31K | (MADP1) | zmU11/U12-31K | 7 | f | 141521141 | 141522060 | RRM 1; CCHC 1 |
2. Splicing factors
Group |
CIWOG |
Gene |
hHomologs |
SeHomologs |
Gene Name |
Chr |
str |
from |
to |
Txn |
Domains |
Transcripts |
|
2.1 | 49 | GRMZM2G020928_T01 | U2AF35 | zmU2AF35/AUS-1 | 6 | f | 164670573 | 164673386 | RRM 1; CCHC 2; | ||||
2.1 | 49 | GRMZM2G020928_T02 | U2AF35 | zmU2AF35/AUS-1 | 6 | f | 164671684 | 164673393 | RRM 1; CCHC 2; | ||||
2.1 | 49 | GRMZM2G020928_T03 | U2AF35 | zmU2AF35/AUS-1 | 6 | f | 164670573 | 164673386 | RRM 1; CCHC 2; | ||||
2.1 | 49 | GRMZM2G025014_T01 | U2AF35 | zmU2AF35/AUS-2 | 2 | f | 229627733 | 229630624 | RRM 1; CCHC 2; | ||||
2.1 | 49 | GRMZM2G025014_T02 | U2AF35 | zmU2AF35/AUS-2 | 2 | f | 229627733 | 229630577 | RRM 1; CCHC 2; | ||||
2.1 | 49 | GRMZM2G025014_T03 | U2AF35 | zmU2AF35/AUS-2 | 2 | f | 229628087 | 229630624 | RRM 1; CCHC 2; | ||||
2.1 | 49 | GRMZM2G025014_T05 | U2AF35 | zmU2AF35/AUS-2 | 2 | f | 229627733 | 229630533 | RRM 1; CCHC 2; | ||||
2.1 | 49 | GRMZM2G031827_T01 | U2AF35 | zmU2AF35/AUS-3 | 8 | r | 68330879 | 68339475 | RRM 1; CCHC 2; | ||||
2.1 | 49 | GRMZM2G031827_T02 | U2AF35 | zmU2AF35/AUS-3 | 8 | r | 68330879 | 68339463 | RRM 1; CCHC 2; | ||||
2.1 | 49 | GRMZM2G031827_T04 | U2AF35 | zmU2AF35/AUS-3 | 8 | r | 68330901 | 68333388 | RRM 1; CCHC 2; | ||||
2.1 | 49 | GRMZM2G031827_T05 | U2AF35 | zmU2AF35/AUS-3 | 8 | r | 68330879 | 68332815 | RRM 1; CCHC 2; | ||||
2.1 | 49 | GRMZM2G031827_T06 | U2AF35 | zmU2AF35/AUS-3 | 8 | r | 68330879 | 68332264 | RRM 1; CCHC 2; | ||||
2.1 | 55 | GRMZM2G022763_T03 | U2AF65 | zmU2AF65a/AULb | 2 | r | 226422367 | 226428811 | RRM 3; | ||||
2.1 | 55 | GRMZM2G022763_T04 | U2AF65 | zmU2AF65a/AULb | 2 | r | 226422401 | 226428780 | RRM 3; | ||||
2.1 | 55 | GRMZM2G057450_T01 | U2AF65 | zmU2AF65a/AULb | 4 | r | 1738856 | 1744944 | RRM 3; | ||||
2.1 | 55 | GRMZM2G057450_T02 | U2AF65 | zmU2AF65a/AULb | 4 | r | 1738856 | 1744822 | RRM 3; | ||||
2.1 | 55 | GRMZM2G057450_T03 | U2AF65 | zmU2AF65a/AULb | 4 | r | 1738856 | 1741495 | RRM 3; | ||||
2.1 | 55 | GRMZM2G057450_T04 | U2AF65 | zmU2AF65a/AULb | 4 | r | 1738856 | 1740991 | RRM 3; | ||||
2.1 | 55 | GRMZM2G057450_T06 | U2AF65 | zmU2AF65a/AULb | 4 | r | 1739179 | 1744822 | RRM 3; | ||||
2.1 | 55 | GRMZM2G093256_T04 | U2AF65 | zmU2AF65a/AULb | 4 | r | 4694078 | 4700240 | RRM 3; | ||||
2.1 | 72 | GRMZM2G058039_T01 | PTB/hnRNP_I | zmPTB2a | 3 | f | 216459980 | 216465728 | RRM 2 | ||||
2.1 | 72 | GRMZM2G178169_T01 | PTB/hnRNP_I | zmPTB2b | 4 | f | 90338530 | 90344825 | RRM 2 | ||||
2.1 | 72 | GRMZM2G178169_T02 | PTB/hnRNP_I | zmPTB2b | 4 | f | 90338547 | 90344650 | RRM 2 | ||||
2.1 | 169 | GRMZM2G052926_T01 | PTB/hnRNP_I | zmPTB1-1 | 8 | f | 99738181 | 99742953 | RRM 4 | ||||
2.1 | 169 | GRMZM2G070113_T01 | PTB/hnRNP_I | zmPTB1-2 | 5 | f | 20583912 | 20588549 | RRM 4 | ||||
2.1 | 169 | GRMZM2G070113_T02 | PTB/hnRNP_I | zmPTB1-2 | 5 | f | 20583912 | 20588509 | RRM 4 | ||||
2.1 | 398 | GRMZM2G000980_T01 | SF1/BBP | zmSF1/BBP-1 | 2 | r | 71693968 | 71698254 | RRM 1; CCHC 2; KH | ||||
2.1 | 398 | GRMZM2G034313_T01 | SF1/BBP | zmSF1/BBP-2 | 10 | f | 108962238 | 108966521 | RRM 1; CCHC 2; KH | ||||
2.1 | 409 | GRMZM2G126839_T01 | U2AF65 | zmAUL2 | 9 | r | 147653474 | 147660753 | RRM 1 | ||||
2.1 | 409 | GRMZM2G126839_T02 | U2AF65 | zmAUL2 | 9 | r | 147653474 | 147656422 | RRM 1 | ||||
2.1 | 481 | AC199922.3_FGT003 | CBP80 | Cbc2p | zmCBP80-1 | 1 | f | 59146485 | 59152222 | MIF4G 1; ARM 3 | |||
2.1 | 481 | GRMZM2G083689_T01 | CBP80 | Cbc2p | zmCBP80-2 | 1 | f | 59126482 | 59152464 | MIF4G 1; ARM 3 | |||
2.1 | 553 | GRMZM2G047528_T01 | U2AF35_related_prote | zmUrp | 5 | r | 173030199 | 173034129 | RRM 1; CCCH 2 | ||||
2.1 | 634 | GRMZM2G034804_T01 | CBP20 | Cbc1 | zmCBP20 | 4 | r | 136085475 | 136089582 | RRM 1 | |||
2.1 | 634 | GRMZM2G034804_T02 | CBP20 | Cbc1 | zmCBP20 | 4 | r | 136085515 | 136089588 | RRM 1 | |||
2.1 | 634 | GRMZM2G034804_T06 | CBP20 | Cbc1 | zmCBP20 | 4 | r | 136086990 | 136089582 | RRM 1 | |||
2.2 | 25 | GRMZM2G331811_T01 | SF2/ASF | zmSRp30-1 | 3 | r | 56895270 | 56915380 | RRM 2 | ||||
2.2 | 25 | GRMZM2G331811_T02 | SF2/ASF | zmSRp30-1 | 3 | r | 56893420 | 56915270 | RRM 2 | ||||
2.2 | 25 | GRMZM2G331811_T03 | SF2/ASF | zmSRp30-1 | 3 | r | 56893937 | 56915270 | RRM 2 | ||||
2.2 | 25 | GRMZM2G331811_T05 | SF2/ASF | zmSRp30-1 | 3 | r | 56893420 | 56915242 | RRM 2 | ||||
2.2 | 25 | GRMZM2G331811_T07 | SF2/ASF | zmSRp30-1 | 3 | r | 56893420 | 56914976 | RRM 2 | ||||
2.2 | 25 | GRMZM2G436092_T01 | SF2/ASF | zmSRp30-1 | 9 | r | 126128485 | 126132296 | RRM 2 | ||||
2.2 | 25 | GRMZM2G436092_T02 | SF2/ASF | zmSRp30-2 | 9 | r | 126128710 | 126132296 | RRM 2 | ||||
2.2 | 31 | GRMZM2G027105_T01 | 9G8 | zmRSZp22a-1 | 5 | r | 182644474 | 182649969 | RRM 1; CCHC 1 | ||||
2.2 | 31 | GRMZM2G027105_T03 | 9G8 | zmRSZp22a-1 | 5 | r | 182644471 | 182649964 | RRM 1; CCHC 1 | ||||
2.2 | 31 | GRMZM2G027105_T04 | 9G8 | zmRSZp22a-1 | 5 | r | 182644475 | 182649964 | RRM 1; CCHC 1 | ||||
2.2 | 31 | GRMZM2G027105_T05 | 9G8 | zmRSZp22a-1 | 5 | r | 182644476 | 182649964 | RRM 1; CCHC 1 | ||||
2.2 | 31 | GRMZM2G027105_T06 | 9G8 | zmRSZp22a-1 | 5 | r | 182644650 | 182649964 | RRM 1; CCHC 1 | ||||
2.2 | 31 | GRMZM2G027105_T07 | 9G8 | zmRSZp22a-1 | 5 | r | 182644485 | 182649944 | RRM 1; CCHC 1 | ||||
2.2 | 31 | GRMZM2G027105_T08 | 9G8 | zmRSZp22a-1 | 5 | r | 182644485 | 182649944 | RRM 1; CCHC 1 | ||||
2.2 | 31 | GRMZM2G151923_T01 | 9G8 | zmRSZp22a-2 | 9 | r | 12191695 | 12195707 | RRM 1; CCHC 1 | ||||
2.2 | 31 | GRMZM2G151923_T02 | 9G8 | zmRSZp22a-2 | 9 | r | 12192561 | 12195707 | RRM 1; CCHC 1 | ||||
2.2 | 31 | GRMZM2G151923_T03 | 9G8 | zmRSZp22a-2 | 9 | r | 12192568 | 12195707 | RRM 1; CCHC 1 | ||||
2.2 | 31 | GRMZM2G151923_T04 | 9G8 | zmRSZp22a-2 | 9 | r | 12192568 | 12195707 | RRM 1; CCHC 1 | ||||
2.2 | 61 | GRMZM2G016296_T01 | SC35 | zmSC35-1 | 4 | r | 202872621 | 202881040 | RRM 1; | ||||
2.2 | 61 | GRMZM2G016296_T02 | SC35 | zmSC35-1 | 4 | r | 202872621 | 202881040 | RRM 1; | ||||
2.2 | 61 | GRMZM2G016296_T03 | SC35 | zmSC35-1 | 4 | r | 202873064 | 202881040 | RRM 1; | ||||
2.2 | 61 | GRMZM2G016296_T04 | SC35 | zmSC35-1 | 4 | r | 202873064 | 202881040 | RRM 1; | ||||
2.2 | 61 | GRMZM2G016296_T05 | SC35 | zmSC35-1 | 4 | r | 202873066 | 202881040 | RRM 1; | ||||
2.2 | 61 | GRMZM2G016296_T06 | SC35 | zmSC35-1 | 4 | r | 202873086 | 202881040 | RRM 1; | ||||
2.2 | 61 | GRMZM2G025281_T01 | SC35 | zmSC35-2 | 7 | f | 160993356 | 160999707 | RRM 1; | ||||
2.2 | 61 | GRMZM2G025281_T02 | SC35 | zmSC35-2 | 7 | f | 160993360 | 160999447 | RRM 1; | ||||
2.2 | 61 | GRMZM2G025281_T03 | SC35 | zmSC35-2 | 7 | f | 160993360 | 160999122 | RRM 1; | ||||
2.2 | 61 | GRMZM2G077823_T01 | SC35 | zmSC35-3 | 2 | f | 209330085 | 209334999 | RRM 1; | ||||
2.2 | 61 | GRMZM2G077823_T02 | SC35 | zmSC35-3 | 2 | f | 209330085 | 209334937 | RRM 1; | ||||
2.2 | 61 | GRMZM2G077823_T03 | SC35 | zmSC35-3 | 2 | f | 209330085 | 209334937 | RRM 1; | ||||
2.2 | 61 | GRMZM2G077823_T04 | SC35 | zmSC35-3 | 2 | f | 209330085 | 209334937 | RRM 1; | ||||
2.2 | 61 | GRMZM2G077823_T05 | SC35 | zmSC35-3 | 2 | f | 209330085 | 209334937 | RRM 1; | ||||
2.2 | 151 | AC203812.3_FGT004 | TASR-2 | zmSCL30a | 9 | f | 122422418 | 122424714 | RRM 1 | ||||
2.2 | 151 | GRMZM2G060594_T02 | TASR-2 | zmSCL33-1 | 7 | r | 162173035 | 162176096 | RRM 1 | ||||
2.2 | 151 | GRMZM2G060594_T05 | TASR-2 | zmSCL33-1 | 7 | r | 162173035 | 162175630 | RRM 1 | ||||
2.2 | 151 | GRMZM2G074416_T01 | TASR-2 | zmSCL30a-2 | 5 | r | 21468143 | 21469606 | RRM 1 | ||||
2.2 | 151 | GRMZM2G426229_T01 | TASR-2 | zmSCL30a-3 | 9 | f | 122421385 | 122424661 | RRM 1 | ||||
2.2 | 204 | GRMZM2G121269_T01 | Plant_Novel_SR_prote | zmRSp40 | 4 | r | 243977485 | 243981166 | RRM 2 | ||||
2.2 | 204 | GRMZM2G121269_T02 | Plant_Novel_SR_prote | zmRSp41 | 4 | r | 243977506 | 243981166 | RRM 2 | ||||
2.2 | 226 | GRMZM2G021223_T01 | Plant_Novel_SR_prote | zmRSp31-1 | 2 | f | 107450554 | 107453509 | RRM 2 | ||||
2.2 | 226 | GRMZM2G021223_T02 | Plant_Novel_SR_prote | zmRSp31-1 | 2 | f | 107450554 | 107453509 | RRM 2 | ||||
2.2 | 226 | GRMZM2G064612_T01 | Plant_Novel_SR_prote | zmRSp31-2 | 9 | f | 150006210 | 150008878 | RRM 2 | ||||
2.2 | 226 | GRMZM2G064612_T02 | Plant_Novel_SR_prote | zmRSp31-2 | 9 | f | 150006214 | 150008842 | RRM 2 | ||||
2.2 | 226 | GRMZM2G064612_T03 | Plant_Novel_SR_prote | zmRSp31-2 | 9 | f | 150006312 | 150008413 | RRM 2 | ||||
2.2 | 292 | GRMZM2G065066_T01 | TASR-2 | zmSCL30 | 1 | r | 155233148 | 155236901 | RRM 1 | ||||
2.3 | 13 | GRMZM2G068479_T01 | hPrp43 | Prp43p | zmPrp43 | 9 | r | 129913568 | 129918013 | DEAD 1; Helicase_C | |||
2.3 | 13 | GRMZM2G068479_T02 | hPrp43 | Prp43p | zmPrp43 | 9 | r | 129915480 | 129918013 | DEAD 1; Helicase_C | |||
2.3 | 13 | GRMZM2G385931_T01 | hPrp43 | Prp43p | zmPrp43 | 1 | f | 51401099 | 51405479 | DEAD 1; Helicase_C | |||
2.3 | 13 | GRMZM2G385931_T02 | hPrp43 | Prp43p | zmPrp43 | 1 | f | 51401104 | 51405479 | DEAD 1; Helicase_C | |||
2.3 | 13 | GRMZM2G385931_T03 | hPrp43 | Prp43p | zmPrp43 | 1 | f | 51401124 | 51404916 | DEAD 1; Helicase_C | |||
2.3 | 255 | GRMZM2G133308_T01 | SR140 | zmSR140-1a | 5 | r | 90600013 | 90617047 | Surp 1;RRM 1;RPR 1 | ||||
2.3 | 255 | GRMZM2G133308_T02 | SR140 | zmSR140-1a | 5 | r | 90601345 | 90617047 | Surp 1;RRM 1;RPR 1 | ||||
2.3 | 255 | GRMZM2G174785_T01 | SR140 | zmSR140-1b | 5 | f | 90865586 | 90898158 | Surp 1;RRM 1;RPR 1 | ||||
2.3 | 255 | GRMZM2G174785_T02 | SR140 | zmSR140-1b | 5 | f | 90865586 | 90896490 | Surp 1;RRM 1;RPR 1 | ||||
2.3 | 549 | GRMZM2G005737_T01 | SPF30 | zmSPF30 | 4 | f | 39171931 | 39176164 | Tudor 1 | ||||
2.3 | 647 | GRMZM2G145034_T01 | SPF45 | zmSPF45 | 7 | f | 121844749 | 121848541 | DIII/G-patch domain | ||||
2.4 | 1 | AC209784.3_FGT007 | HSP73/HSPA8 | ZmHSP73-1 | 3 | r | 179348763 | 179351949 | Hsp70 1; | ||||
2.4 | 1 | GRMZM2G056039_T01 | HSP73/HSPA8 | ZmHSP73-2 | 2 | f | 154120436 | 154124559 | Hsp70 1; | ||||
2.4 | 1 | GRMZM2G066902_T01 | HSP73/HSPA8 | ZmHSP73-3 | 2 | r | 227852940 | 227856097 | Hsp70 1; | ||||
2.4 | 1 | GRMZM2G106429_T01 | HSP73/HSPA8 | ZmHSP73-4 | 4 | r | 2270883 | 2273616 | Hsp70 1; | ||||
2.4 | 1 | GRMZM2G145275_T01 | HSP73/HSPA8 | ZmHSP73-5 | 1 | r | 41344637 | 41346179 | Hsp70 1; | ||||
2.4 | 1 | GRMZM2G310431_T01 | HSP73/HSPA8 | ZmHSP73-6 | 8 | r | 167668008 | 167671371 | Hsp70 1; | ||||
2.4 | 1 | GRMZM2G340251_T01 | HSP73/HSPA8 | ZmHSP73-7 | 3 | r | 122630814 | 122635253 | Hsp70 1; | ||||
2.4 | 1 | GRMZM2G340251_T02 | HSP73/HSPA8 | ZmHSP73-7 | 3 | r | 122630112 | 122635063 | Hsp70 1; | ||||
2.4 | 1 | GRMZM2G340251_T03 | HSP73/HSPA8 | ZmHSP73-7 | 3 | r | 122630814 | 122635263 | Hsp70 1; | ||||
2.4 | 1 | GRMZM2G340251_T04 | HSP73/HSPA8 | ZmHSP73-7 | 3 | r | 122631061 | 122632995 | Hsp70 1; | ||||
2.4 | 1 | GRMZM2G351416_T01 | HSP73/HSPA8 | ZmHSP73-8 | 8 | r | 115249761 | 115252747 | Hsp70 1; | ||||
2.4 | 1 | GRMZM2G351416_T02 | HSP73/HSPA8 | ZmHSP73-8 | 8 | r | 115249908 | 115253333 | Hsp70 1; | ||||
2.4 | 1 | GRMZM2G366532_T01 | HSP73/HSPA8 | ZmHSP73-9 | 9 | r | 135151392 | 135154624 | Hsp70 1; | ||||
2.4 | 1 | GRMZM2G366532_T02 | HSP73/HSPA8 | ZmHSP73-9 | 9 | r | 135151738 | 135155086 | Hsp70 1; | ||||
2.4 | 1 | GRMZM2G415007_T01 | HSP73/HSPA8 | ZmHSP73-10 | 4 | r | 245672095 | 245675869 | Hsp70 1; | ||||
2.4 | 1 | GRMZM2G428391_T01 | HSP73/HSPA8 | ZmHSP73-11 | 1 | f | 41228507 | 41231270 | Hsp70 1; | ||||
2.4 | 1 | GRMZM2G428391_T02 | HSP73/HSPA8 | ZmHSP73-11 | 1 | f | 41228882 | 41231270 | Hsp70 1; | ||||
2.4 | 1 | GRMZM2G471196_T01 | HSP73/HSPA8 | ZmHSP73-12 | 5 | r | 7316606 | 7318584 | Hsp70 1; | ||||
2.4 | 134 | GRMZM2G020728_T01 | G10 | Cwc14p | zmG10-1 | 8 | r | 165548149 | 165551343 | G10 1; | |||
2.4 | 134 | GRMZM2G020728_T02 | G10 | Cwc14p | zmG10-1 | 8 | r | 165548149 | 165551285 | G10 1; | |||
2.4 | 134 | GRMZM2G053801_T01 | G10 | Cwc14p | zmG10-2 | 3 | f | 175684971 | 175689473 | G10 1; | |||
2.4 | 134 | GRMZM2G095670_T01 | G10 | Cwc14p | zmG10-3 | 8 | r | 165635243 | 165638478 | G10 1; | |||
2.4 | 134 | GRMZM2G095670_T02 | G10 | Cwc14p | zmG10-3 | 8 | r | 165635243 | 165638478 | G10 1; | |||
2.4 | 134 | GRMZM2G099007_T01 | G10 | Cwc14p | zmG10-4 | 3 | f | 175616762 | 175618873 | G10 1; | |||
2.4 | 167 | GRMZM2G100448_T01 | hSyf3/CRN | Clf1/Syf3p | zmCRN1a | 1 | f | 255764991 | 255772640 | TPR 1; HAT 14; TPR | |||
2.4 | 168 | GRMZM2G162388_T01 | hSyf3/CRN | Clf1/Syf3p | zmCypE1a-1 | 11 | r | 13115719 | 13116897 | Pro_isomerase 1 | |||
2.4 | 168 | GRMZM2G326111_T01 | hSyf3/CRN | Clf1/Syf3p | zmCypE1a-2 | 5 | f | 167152122 | 167153331 | Pro_isomerase 1 | |||
2.4 | 288 | GRMZM2G060160_T01 | hSyf1 | Syf1p | zmSyf1-1 | 2 | r | 210927199 | 210932295 | TPR 1;HAT 10;TPRli | |||
2.4 | 288 | GRMZM2G060160_T02 | hSyf1 | Syf1p | zmSyf1-1 | 2 | r | 210930939 | 210932295 | TPR 1;HAT 10;TPRli | |||
2.4 | 288 | GRMZM2G356894_T01 | hSyf1 | Syf1p | zmSyf1-2 | 7 | r | 164318867 | 164324211 | TPR 1;HAT 10;TPRli | |||
2.4 | 288 | GRMZM2G356894_T02 | hSyf1 | Syf1p | zmSyf1-2 | 7 | r | 164322738 | 164324344 | TPR 1;HAT 10;TPRli | |||
2.4 | 297 | GRMZM2G160863_T01 | hECM2 | Ecm2p | zmECM2-1a | 9 | f | 15530882 | 15532943 | RRM 1; CCCH 1 | |||
2.4 | 407 | GRMZM2G419085_T01 | SPF27/BCAS2 | zmSPF27 | 3 | r | 39734635 | 39739197 | BCAS2 1 | ||||
2.4 | 414 | GRMZM2G037698_T01 | hPrp19 | Prp19p | zmPrp19a | 1 | r | 233340042 | 233351633 | WD-40 7; Ubox 1 | |||
2.4 | 414 | GRMZM2G037698_T02 | hPrp19 | Prp19p | zmPrp19a | 1 | r | 233340348 | 233351633 | WD-40 7; Ubox 1 | |||
2.4 | 467 | GRMZM2G017089_T01 | PRL1 | Prp46p | zmPRL1 | 1 | r | 253177589 | 253187520 | WD-40 2;WD40like 1 | |||
2.4 | 467 | GRMZM2G017089_T02 | PRL1 | Prp46p | zmPRL1 | 1 | r | 253177626 | 253187520 | WD-40 2;WD40like 1 | |||
2.4 | 471 | GRMZM2G102447_T01 | GCIP_p29 | Syf2 | zmGCIPp29-1 | 5 | f | 59057355 | 59060077 | ||||
2.4 | 471 | GRMZM2G102447_T02 | GCIP_p29 | Syf2 | zmGCIPp29-1 | 5 | f | 59057355 | 59060075 | ||||
2.4 | 471 | GRMZM2G102447_T03 | GCIP_p29 | Syf2 | zmGCIPp29-1 | 5 | f | 59057355 | 59060075 | ||||
2.4 | 471 | GRMZM2G308689_T01 | GCIP_p29 | Syf2 | zmGCIPp29-2 | 6 | r | 84384949 | 84387602 | ||||
2.4 | 545 | GRMZM2G154278_T01 | AD-002 | Cwc15p | zmAD-002 | 8 | f | 26081340 | 26084929 | Cwf_Cwc_15 1 | |||
2.4 | 545 | GRMZM2G154278_T02 | AD-002 | Cwc15p | zmAD-002 | 8 | f | 26081340 | 26084917 | Cwf_Cwc_15 1 | |||
2.4 | 559 | AC203535.4_FGT001 | CDC5 | Cef1 | zmCDC5 | 3 | f | 156245663 | 156254493 | SANT 2 | |||
2.4 | 640 | GRMZM2G043331_T01 | beta_catenin-like_1 | gmCTNNNBL1 | 5 | r | 215897756 | 215901515 | Armadillo 1; ARM 1 | ||||
2.4 | 640 | GRMZM2G043331_T02 | beta_catenin-like_1 | gmCTNNNBL1 | 5 | r | 215898183 | 215901515 | Armadillo 1; ARM 1 | ||||
2.4 | 642 | GRMZM2G410479_T01 | KIAA0560 | zmAquarius | 1 | f | 68313288 | 68323300 | |||||
2.4 | 645 | GRMZM2G478709_T01 | SKIP | Prp45p | zmSKIP | 4 | f | 178733081 | 178735487 | SKIP/SNW 1 | |||
2.4 | 866 | GRMZM2G055682_T01 | MGC23918 | zmMGC23918 | 5 | f | 64502015 | 64504945 | |||||
2.4 | 1100 | GRMZM2G024451_T01 | hIsy1 | Isy1p | zmIsy1 | 5 | f | 181110192 | 181113404 | Lsy1 1 | |||
2.5 | 122 | GRMZM2G147811_T01 | hPrp4 | kinase | zmPRP4K-1a | 3 | f | 99294889 | 99306004 | Pkinase 1;TyrKc 1; | |||
2.5 | 122 | GRMZM2G147811_T02 | hPrp4 | kinase | zmPRP4K-1a | 3 | f | 99294889 | 99302948 | Pkinase 1;TyrKc 1; | |||
2.5 | 122 | GRMZM2G147811_T03 | hPrp4 | kinase | zmPRP4K-1a | 3 | f | 99294889 | 99300855 | Pkinase 1;TyrKc 1; | |||
2.5 | 122 | GRMZM2G147811_T04 | hPrp4 | kinase | zmPRP4K-1a | 3 | f | 99294889 | 99298085 | Pkinase 1;TyrKc 1; | |||
2.5 | 122 | GRMZM2G151236_T01 | hPrp4 | kinase | zmPRP4K-1b | 1 | r | 180675165 | 180685568 | Pkinase 1;TyrKc 1; | |||
2.5 | 122 | GRMZM2G151236_T03 | hPrp4 | kinase | zmPRP4K-1b | 1 | r | 180675180 | 180685568 | Pkinase 1;TyrKc 1; | |||
2.5 | 122 | GRMZM2G151236_T04 | hPrp4 | kinase | zmPRP4K-1b | 1 | r | 180678644 | 180685568 | Pkinase 1;TyrKc 1; | |||
2.5 | 122 | GRMZM2G151236_T05 | hPrp4 | kinase | zmPRP4K-1b | 1 | r | 180678709 | 180685568 | Pkinase 1;TyrKc 1; | |||
2.5 | 122 | GRMZM2G151236_T06 | hPrp4 | kinase | zmPRP4K-1b | 1 | r | 180679841 | 180685568 | Pkinase 1;TyrKc 1; | |||
2.5 | 220 | GRMZM2G149708_T01 | TBL1-rp_1 | zmTBL1-rp1-1 | 2 | r | 101034454 | 101055071 | WD-40 5; Peptidease | ||||
2.5 | 220 | GRMZM2G149708_T02 | TBL1-rp_1 | zmTBL1-rp1-1 | 2 | r | 101034454 | 101047496 | WD-40 5; Peptidease | ||||
2.5 | 220 | GRMZM2G159330_T01 | TBL1-rp_1 | zmTBL1-rp1-2 | 10 | r | 100903641 | 100921394 | WD-40 5; Peptidease | ||||
2.5 | 464 | GRMZM2G089406_T01 | N-CoR1 | zmN-CoR1-1 | 8 | f | 130022222 | 130029109 | SANT 2;Homeodomain_ | ||||
2.5 | 464 | GRMZM2G447745_T01 | N-CoR1 | zmN-CoR1-2 | 6 | f | 16366099 | 16373255 | SANT 2;Homeodomain_ | ||||
2.5 | 474 | GRMZM2G080120_T01 | FBP-21 | zmFBP21 | 9 | r | 7591400 | 7594842 | C2H2 1 | ||||
2.5 | 543 | GRMZM2G416069_T01 | Smc-1 | zmSmc1 | 1 | f | 201275415 | 201278190 | ATP_GTP_A_BS 1;SMC_ | ||||
2.5 | 543 | GRMZM2G416069_T02 | Smc-1 | zmSmc1 | 1 | f | 201275480 | 201292203 | ATP_GTP_A_BS 1;SMC_ | ||||
2.5 | 543 | GRMZM2G416069_T03 | Smc-1 | zmSmc1 | 1 | f | 201287707 | 201292171 | ATP_GTP_A_BS 1;SMC_ | ||||
2.5 | 868 | GRMZM2G168685_T01 | NPW38 | zmNPW38-1 | 8 | f | 161165344 | 161171041 | WW 2 | ||||
2.5 | 868 | GRMZM2G168685_T04 | NPW38 | zmNPW38-2 | 8 | f | 161166753 | 161170478 | WW 2 | ||||
2.6 | 65 | GRMZM2G157329_T01 | ALY | zmALY-1a | 1 | r | 41663364 | 41667671 | RRM 1; | ||||
2.6 | 65 | GRMZM2G157329_T02 | ALY | zmALY-1a | 1 | r | 41663188 | 41667167 | RRM 1; | ||||
2.6 | 65 | GRMZM2G157329_T03 | ALY | zmALY-1a | 1 | r | 41663347 | 41667167 | RRM 1; | ||||
2.6 | 65 | GRMZM2G166780_T02 | ALY | zmALY-1b | 9 | f | 135006784 | 135012838 | RRM 1; | ||||
2.6 | 65 | GRMZM2G166780_T04 | ALY | zmALY-1b | 9 | f | 135006809 | 135010767 | RRM 1; | ||||
2.6 | 80 | AC203862.4_FGT003 | UAP56 | zmUAP56-1 | 8 | f | 77474704 | 77478906 | DEAD 1; Helicase_C | ||||
2.6 | 80 | GRMZM2G088218_T01 | UAP56 | zmUAP56-2 | 8 | r | 135385406 | 135404057 | DEAD 1; Helicase_C | ||||
2.6 | 80 | GRMZM2G088218_T02 | UAP56 | zmUAP56-3 | 8 | r | 135385406 | 135404057 | DEAD 1; Helicase_C | ||||
2.6 | 80 | GRMZM2G088218_T03 | UAP56 | zmUAP56-4 | 8 | r | 135385440 | 135404022 | DEAD 1; Helicase_C | ||||
2.6 | 227 | GRMZM2G171921_T01 | ALY | zmALY-2a | 4 | r | 87843875 | 87849381 | RRM 1 | ||||
2.6 | 227 | GRMZM2G171921_T02 | ALY | zmALY-2a | 4 | r | 87843875 | 87849381 | RRM 1 | ||||
2.6 | 227 | GRMZM2G171921_T04 | ALY | zmALY-2a | 4 | r | 87844160 | 87849381 | RRM 1 | ||||
2.6 | 227 | GRMZM2G171921_T05 | ALY | zmALY-2a | 4 | r | 87845446 | 87849381 | RRM 1 | ||||
2.6 | 227 | GRMZM2G171921_T06 | ALY | zmALY-2a | 4 | r | 87843875 | 87849370 | RRM 1 | ||||
2.6 | 345 | GRMZM2G060540_T01 | RNPS1 | zmSR45/zmRNPS1-1 | 3 | r | 143191082 | 143197127 | RRM 1 | ||||
2.6 | 345 | GRMZM2G060540_T02 | RNPS1 | zmSR45/zmRNPS1-1 | 3 | r | 143191082 | 143197127 | RRM 1 | ||||
2.6 | 345 | GRMZM2G133926_T01 | RNPS1 | zmSR45/zmRNPS1-2 | 8 | r | 156072747 | 156082202 | RRM 1 | ||||
2.6 | 348 | GRMZM2G000560_T01 | Magoh | zmMagoh | 4 | r | 39650258 | 39652688 | Mago_nashi 1 | ||||
2.6 | 417 | AC208348.3_FGT005 | Nuk-34/eIF4A3/DDX48 | zmDDX48/eIF4A3-1a | 5 | f | 215801364 | 215803969 | DEAD 1; Helicase_C | ||||
2.6 | 417 | GRMZM2G018947_T01 | Nuk-34/eIF4A3/DDX48 | zmDDX48/eIF4A3-1b | 4 | f | 168078043 | 168081637 | DEAD 1; Helicase_C | ||||
2.6 | 417 | GRMZM2G133764_T01 | Nuk-34/eIF4A3/DDX48 | zmDDX48/eIF4A3-1c | 5 | f | 215800028 | 215804708 | DEAD 1; Helicase_C | ||||
2.6 | 417 | GRMZM2G133764_T02 | Nuk-34/eIF4A3/DDX48 | zmDDX48/eIF4A3-1c | 5 | f | 215800557 | 215804286 | DEAD 1; Helicase_C | ||||
2.6 | 480 | AC233958.1_FGT002 | Y14 | zmY14-1 | 8 | f | 127362701 | 127365301 | RRM 1; RBMB 4 | ||||
2.6 | 480 | GRMZM2G172399_T01 | Y14 | zmY14-2 | 10 | f | 88105227 | 88110835 | RRM 1; RBMB 4 | ||||
2.6 | 650 | GRMZM2G002558_T02 | pinin | zmPinin | 1 | r | 263843661 | 263848125 | Pinin/SDK/memA 1 | ||||
2.7 | 13 | GRMZM2G012453_T01 | Prp22 | Prp22 | zmPrp22 | 1 | r | 193001088 | 193004869 | DEAD 1; Helicase_C | |||
2.7 | 13 | GRMZM2G029258_T01 | Prp22 | Prp22 | zmPrp22 | 5 | f | 125746950 | 125752480 | DEAD 1; Helicase_C | |||
2.7 | 415 | GRMZM2G034651_T01 | Prp18 | Prp18 | zmPrp18-1a | 10 | r | 131224252 | 131225837 | Prp18 1; SFM 1 | |||
2.7 | 415 | GRMZM2G034709_T01 | Prp18 | Prp18 | zmPrp18-1b | 10 | r | 131217959 | 131219504 | Prp18 1; SFM 1 | |||
2.7 | 415 | GRMZM2G046916_T01 | Prp18 | Prp18 | zmPrp18-1c | 7 | r | 153780640 | 153783758 | Prp18 1; SFM 1 | |||
2.7 | 415 | GRMZM2G053622_T01 | Prp18 | Prp18 | zmPrp18-1d | 10 | r | 130962636 | 130964218 | Prp18 1; SFM 1 | |||
2.7 | 415 | GRMZM2G053642_T01 | Prp18 | Prp18 | zmPrp18-1e | 10 | r | 130968943 | 130972339 | Prp18 1; SFM 1 | |||
2.7 | 415 | GRMZM2G073041_T01 | Prp18 | Prp18 | zmPrp18-1f | 10 | f | 130897399 | 130898977 | Prp18 1; SFM 1 | |||
2.7 | 416 | AC217887.3_FGT005 | Prp18 | Prp18 | zmPrp17-1a | 9 | r | 117591163 | 117594404 | WD-40 7; | |||
2.7 | 416 | GRMZM2G085825_T01 | Prp18 | Prp18 | zmPrp17-1b | 1 | f | 67265264 | 67268939 | WD-40 7; | |||
2.7 | 551 | GRMZM2G057026_T01 | Slu7 | Slu7p | zmSLU7-1a | 6 | f | 7158683 | 7163047 | ||||
2.7 | 747 | GRMZM2G090168_T01 | Prp17 | Prp17p | zmPrp17-1 | 3 | r | 51133 | 63780 | WD-40 6 | |||
2.7 | 747 | GRMZM2G136014_T01 | Prp17 | Prp17p | zmPrp17-2 | 3 | f | 230143398 | 230154311 | WD-40 6 | |||
2.7 | 1102 | GRMZM2G000371_T01 | Prp22 | Prp22 | zmPrp22-3 | 9 | f | 14421888 | 14428464 | DEAD 1;Helicase_C | |||
2.7 | 1103 | GRMZM2G300375_T01 | Prp22 | Prp22 | zmPrp22-2 | 8 | f | 159074785 | 159083172 | DEAD 1;Helicase_C | |||
2.8 | 13 | GRMZM2G121776_T01 | Prp2 | zmPrp2-1a | 4 | f | 61866268 | 61876923 | DEAD 1; Helicase_C | ||||
2.8 | 13 | GRMZM2G121776_T02 | Prp2 | zmPrp2-1a | 4 | f | 61866576 | 61876497 | DEAD 1; Helicase_C | ||||
2.8 | 13 | GRMZM2G480809_T01 | Prp2 | zmPrp2-1a | 2 | r | 199383471 | 199398383 | DEAD 1; Helicase_C | ||||
2.8 | 293 | GRMZM2G056145_T01 | SRm300 | zmSRM300like | 8 | f | 6757379 | 6765664 | RRM 1; Filamin/ABP28 | ||||
2.8 | 293 | GRMZM2G132936_T02 | SRm300 | zmSRM300like | 3 | r | 32618974 | 32626820 | RRM 1; Filamin/ABP28 | ||||
2.8 | 293 | GRMZM2G132936_T03 | SRm300 | zmSRM300like | 3 | r | 32618987 | 32626820 | RRM 1; Filamin/ABP28 | ||||
2.8 | 296 | GRMZM2G030659_T01 | Prp5 | zmPrp5-1a | 10 | f | 77258598 | 77263234 | DEAD 1; Helicase_C | ||||
2.8 | 478 | GRMZM2G073567_T01 | hTra-2/SFRS10 | zmTra/SFRS1 | 9 | f | 136146481 | 136150081 | RRM 1 | ||||
2.8 | 754 | GRMZM2G090869_T01 | Prp5 | zmPrp5-1 | 9 | r | 130698962 | 130703604 | DEAD 1;Helicase_C | ||||
2.8 | 754 | GRMZM2G121871_T01 | Prp5 | zmPrp5-2 | 1 | f | 49825645 | 49830097 | DEAD 1;Helicase_C | ||||
2.8 | 979 | GRMZM2G461145_T01 | hDbr1 | dbr1 | zmDbr1 | 5 | r | 9587184 | 9591736 | Metallophos 1;DBRI |
3. Splicing regulation
Group |
CIWOG |
Gene |
hHomologs |
SeHomologs |
Gene Name |
Chr |
str |
from |
to |
Txn |
Domains |
Transcripts |
|
3.1 | 71 | GRMZM2G063792_T01 | Lammer/CLK | kinase | zmAFC1/zmAFC2 | 4 | r | 130050899 | 130054442 | Pkinase 1; TyrKc 1 | |||
3.1 | 71 | GRMZM2G179308_T01 | Lammer/CLK | kinase | zmAFC1/zmAFC2 | 5 | r | 179952708 | 179956073 | Pkinase 1; TyrKc 1 | |||
3.1 | 71 | GRMZM2G300990_T01 | Lammer/CLK | kinase | zmAFC1/zmAFC2 | 1 | r | 278874652 | 278879228 | Pkinase 1; TyrKc 1 | |||
3.1 | 71 | GRMZM2G300990_T02 | Lammer/CLK | kinase | zmAFC1/zmAFC2 | 1 | r | 278874652 | 278879228 | Pkinase 1; TyrKc 1 | |||
3.1 | 71 | GRMZM2G386991_T01 | Lammer/CLK | kinase | zmAFC1/zmAFC2 | 3 | f | 179899513 | 179904124 | Pkinase 1; TyrKc 1 | |||
3.1 | 135 | GRMZM2G009843_T01 | Kinase | SRPK2 | zmSRPK2a-1 | 1 | r | 275192579 | 275197329 | Pkinase 1; TyrKc 1 | |||
3.1 | 135 | GRMZM2G009843_T02 | Kinase | SRPK2 | zmSRPK2a-1 | 1 | r | 275192579 | 275196913 | Pkinase 1; TyrKc 1 | |||
3.1 | 135 | GRMZM2G171987_T01 | Kinase | SRPK2 | zmSRPK2a-2 | 5 | r | 7239208 | 7243758 | Pkinase 1; TyrKc 1 | |||
3.1 | 209 | AC233910.1_FGT010 | Kinase | SRPK1 | zmSRPK1a-1 | 2 | r | 194835350 | 194838089 | Pkinase 1; TyrKc 1 | |||
3.1 | 209 | GRMZM2G052434_T01 | Kinase | SRPK1 | zmSRPK1a-2 | 2 | r | 196027118 | 196031515 | Pkinase 1; TyrKc 1 | |||
3.1 | 209 | GRMZM2G162086_T01 | Kinase | SRPK1 | zmSRPK1a-3 | 7 | f | 138905697 | 138910058 | Pkinase 1; TyrKc 1 | |||
3.1 | 209 | GRMZM2G162086_T02 | Kinase | SRPK1 | zmSRPK1a-3 | 7 | f | 138905565 | 138909862 | Pkinase 1; TyrKc 1 | |||
3.1 | 290 | GRMZM2G094039_T02 | Kinase | Lammer/CLK_kinase | zmAFC3-1 | 8 | f | 139170538 | 139175208 | Pkinase 1;TyrKc 1;S | |||
3.1 | 290 | GRMZM2G094039_T03 | Kinase | Lammer/CLK_kinase | zmAFC3-1 | 8 | f | 139170538 | 139175208 | Pkinase 1;TyrKc 1;S | |||
3.1 | 290 | GRMZM2G366935_T01 | Kinase | Lammer/CLK_kinase | zmAFC3-2 | 3 | f | 220102295 | 220107273 | Pkinase 1;TyrKc 1;S | |||
3.1 | 290 | GRMZM2G366935_T03 | Kinase | Lammer/CLK_kinase | zmAFC3-2 | 3 | f | 220102333 | 220107273 | Pkinase 1;TyrKc 1;S | |||
3.2 | 45 | GRMZM2G009448_T01 | Glycine-Rich_RBD | zmGRBP1d/GRBP1c/GRBP1e-1 | 10 | f | 17650861 | 17654593 | RRM 1 | ||||
3.2 | 45 | GRMZM2G042118_T01 | Glycine-Rich_RBD | zmGRBP1d/GRBP1c/GRBP1e-2 | 8 | r | 160944884 | 160947463 | RRM 1 | ||||
3.2 | 45 | GRMZM2G131167_T01 | Glycine-Rich_RBD | zmGRBP1d/GRBP1c/GRBP1e-3 | 7 | f | 158013851 | 158016644 | RRM 1 | ||||
3.2 | 45 | GRMZM2G131167_T03 | Glycine-Rich_RBD | zmGRBP1d/GRBP1c/GRBP1e-3 | 7 | f | 158013851 | 158016543 | RRM 1 | ||||
3.2 | 45 | GRMZM2G150521_T01 | Glycine-Rich_RBD | zmGRBP1d/GRBP1c/GRBP1e-1 | 3 | r | 131504038 | 131507887 | RRM 1 | ||||
3.2 | 109 | GRMZM2G080603_T01 | Glycine-Rich_RBD | zmGRP7/zmGRBP3a-1 | 1 | r | 178338716 | 178340282 | RRM 1 | ||||
3.2 | 109 | GRMZM2G080603_T02 | Glycine-Rich_RBD | zmGRP7/zmGRBP3a-1 | 1 | r | 178338784 | 178339792 | RRM 1 | ||||
3.2 | 109 | GRMZM2G080603_T03 | Glycine-Rich_RBD | zmGRP7/zmGRBP3a-1 | 1 | r | 178338822 | 178340282 | RRM 1 | ||||
3.2 | 109 | GRMZM2G165901_T01 | Glycine-Rich_RBD | zmGRP7/zmGRBP3a-2 | 5 | r | 13993606 | 13995008 | RRM 1 | ||||
3.2 | 109 | GRMZM2G165901_T02 | Glycine-Rich_RBD | zmGRP7/zmGRBP3a-2 | 5 | r | 13993784 | 13994747 | RRM 1 | ||||
3.2 | 109 | GRMZM2G165901_T03 | Glycine-Rich_RBD | zmGRP7/zmGRBP3a-2 | 5 | r | 13993745 | 13995008 | RRM 1 | ||||
3.3 | 29 | GRMZM2G013065_T01 | hnRNP_A/B | ZmRNPA/B-1 | 7 | r | 14952359 | 14954293 | RRM 2 | ||||
3.3 | 29 | GRMZM2G014400_T01 | hnRNP_A/B | ZmRNPA/B-2 | 2 | f | 205027923 | 205039853 | RRM 2 | ||||
3.3 | 29 | GRMZM2G139090_T01 | hnRNP_A/B | ZmRNPA/B-3 | 9 | f | 57594132 | 57597048 | RRM 2 | ||||
3.3 | 29 | GRMZM2G144890_T01 | hnRNP_A/B | ZmRNPA/B-4 | 2 | f | 229446407 | 229454766 | RRM 2 | ||||
3.3 | 29 | GRMZM2G162954_T01 | hnRNP_A/B | ZmRNPA/B-5 | 7 | r | 15154191 | 15160953 | RRM 2 | ||||
3.3 | 29 | GRMZM2G346701_T01 | hnRNP_A/B | ZmRNPA/B-6 | 7 | f | 15088808 | 15090774 | RRM 2 | ||||
3.3 | 29 | GRMZM2G550472_T01 | hnRNP_A/B | ZmRNPA/B-7 | 6 | r | 104426739 | 104430306 | RRM 2 | ||||
3.3 | 149 | GRMZM2G132465_T01 | hnRNP_A/B | zmUBA2a | 3 | f | 39144323 | 39147280 | RRM 2 | ||||
3.3 | 149 | GRMZM2G132465_T02 | hnRNP_A/B | zmUBA2a | 3 | f | 39144323 | 39147254 | RRM 2 | ||||
3.3 | 149 | GRMZM2G132465_T03 | hnRNP_A/B | zmUBA2a | 3 | f | 39144323 | 39147233 | RRM 2 | ||||
3.3 | 149 | GRMZM2G132465_T04 | hnRNP_A/B | zmUBA2a | 3 | f | 39144323 | 39147233 | RRM 2 | ||||
3.3 | 149 | GRMZM2G132465_T05 | hnRNP_A/B | zmUBA2a | 3 | f | 39144323 | 39145907 | RRM 2 | ||||
3.3 | 257 | GRMZM2G049866_T01 | hnRNP_A/B | zmUBA2c-1 | 3 | r | 223636239 | 223640866 | RRM 2 | ||||
3.3 | 257 | GRMZM2G049866_T02 | hnRNP_A/B | zmUBA2c-1 | 3 | r | 223639291 | 223640866 | RRM 2 | ||||
3.3 | 257 | GRMZM2G117715_T01 | hnRNP_A/B | zmUBA2c-2 | 8 | r | 141611068 | 141616084 | RRM 2 | ||||
3.3 | 257 | GRMZM2G117715_T02 | hnRNP_A/B | zmUBA2c-2 | 8 | r | 141612379 | 141616084 | RRM 2 | ||||
3.3 | 418 | AC198361.3_FGT004 | hnRNP_A/B | zmRNPA/B_1c | 1 | r | 232679235 | 232680720 | RRM 2 | ||||
3.3 | 418 | GRMZM2G167505_T01 | hnRNP_A/B | zmRNPA/B_1a | 5 | f | 29310920 | 29317039 | RRM 2 | ||||
3.3 | 418 | GRMZM2G167505_T02 | hnRNP_A/B | zmRNPA/B_1a | 5 | f | 29310920 | 29317039 | RRM 2 | ||||
3.3 | 418 | GRMZM2G167505_T03 | hnRNP_A/B | zmRNPA/B_1a | 5 | f | 29310920 | 29313839 | RRM 2 | ||||
3.3 | 418 | GRMZM2G176918_T02 | hnRNP_A/B | zmRNPA/B_1b | 1 | r | 232678110 | 232680877 | RRM 2 | ||||
3.3 | 648 | GRMZM2G139643_T01 | hnRNP_A/B | zmRNPA/B_8b-1 | 4 | f | 235501343 | 235506470 | RRM 2 | ||||
3.3 | 648 | GRMZM2G139643_T02 | hnRNP_A/B | zmRNPA/B_8b-1 | 4 | f | 235502140 | 235506280 | RRM 2 | ||||
3.3 | 648 | GRMZM2G139643_T03 | hnRNP_A/B | zmRNPA/B_8b-1 | 4 | f | 235502140 | 235506280 | RRM 2 | ||||
3.3 | 648 | GRMZM2G139643_T04 | hnRNP_A/B | zmRNPA/B_8b-1 | 4 | f | 235502140 | 235506182 | RRM 2 | ||||
3.3 | 648 | GRMZM2G139643_T05 | hnRNP_A/B | zmRNPA/B_8b-1 | 4 | f | 235502140 | 235506182 | RRM 2 | ||||
3.3 | 648 | GRMZM2G167356_T01 | hnRNP_A/B | zmRNPA/B_8b-2 | 5 | r | 154322359 | 154326785 | RRM 2 | ||||
3.3 | 648 | GRMZM2G167356_T02 | hnRNP_A/B | zmRNPA/B_8b-2 | 5 | r | 154322381 | 154326832 | RRM 2 | ||||
3.3 | 655 | AC186319.4_FGT002 | hnRNP_A/B | zmRNP_N1-1 | 1 | f | 142551960 | 142554111 | RRM 2;HUDSXLRNA 2 | ||||
3.3 | 655 | GRMZM2G050218_T02 | hnRNP_A/B | zmRNP_N1-2 | 4 | r | 203403469 | 203405848 | RRM 2;HUDSXLRNA 2 | ||||
3.4 | 93 | GRMZM2G019919_T01 | hnRNP_R/Q | hnRNP-R3/zmPA/B | 2 | f | 21175584 | 21180301 | RRM 3 | ||||
3.4 | 93 | GRMZM2G019919_T02 | hnRNP_R/Q | hnRNP-R3/zmPA/B | 2 | f | 21175584 | 21180291 | RRM 3 | ||||
3.4 | 93 | GRMZM2G019919_T03 | hnRNP_R/Q | hnRNP-R3/zmPA/B | 2 | f | 21175584 | 21180161 | RRM 3 | ||||
3.4 | 93 | GRMZM2G019919_T04 | hnRNP_R/Q | hnRNP-R3/zmPA/B | 2 | f | 21177591 | 21180250 | RRM 3 | ||||
3.4 | 120 | GRMZM2G075942_T01 | hnRNP_R/Q | zm-hnRNP-R2a | 4 | f | 185927805 | 185952636 | RRM 3 | ||||
3.4 | 120 | GRMZM2G075942_T02 | hnRNP_R/Q | zm-hnRNP-R2a | 4 | f | 185927805 | 185952635 | RRM 3 | ||||
3.4 | 120 | GRMZM2G101867_T01 | hnRNP_R/Q | zm-hnRNP-R2b | 2 | f | 144899392 | 144904833 | RRM 3 | ||||
3.4 | 120 | GRMZM2G101867_T02 | hnRNP_R/Q | zm-hnRNP-R2b | 2 | f | 144899699 | 144904732 | RRM 3 | ||||
3.4 | 179 | GRMZM2G103430_T01 | hnRNP_R/Q | zm-hnRNP-R1 | 4 | r | 38018558 | 38022229 | RRM 3 | ||||
3.4 | 179 | GRMZM2G103430_T02 | hnRNP_R/Q | zm-hnRNP-R1 | 4 | r | 38018558 | 38022225 | RRM 3 | ||||
3.4 | 179 | GRMZM2G103430_T03 | hnRNP_R/Q | zm-hnRNP-R1 | 4 | r | 38018558 | 38022225 | RRM 3 | ||||
3.4 | 179 | GRMZM2G103430_T04 | hnRNP_R/Q | zm-hnRNP-R1 | 4 | r | 38018558 | 38022225 | RRM 3 | ||||
3.4 | 179 | GRMZM2G103430_T05 | hnRNP_R/Q | zm-hnRNP-R1 | 4 | r | 38018925 | 38022229 | RRM 3 | ||||
3.4 | 183 | GRMZM2G005459_T01 | CUG-BP | zmCUG-BP1-1 | 8 | r | 158094441 | 158100864 | RRM 3; HUDSXLRNA 4 | ||||
3.4 | 183 | GRMZM2G177001_T01 | CUG-BP | zmCUG-BP1-2 | 6 | r | 136588594 | 136593665 | RRM 3; HUDSXLRNA 4 | ||||
3.4 | 183 | GRMZM2G177001_T02 | CUG-BP | zmCUG-BP1-2 | 6 | r | 136588659 | 136593665 | RRM 3; HUDSXLRNA 4 | ||||
3.4 | 337 | GRMZM2G065276_T01 | _ | zmFCA1 | 2 | f | 160110203 | 160130684 | RRM 2; WW 1 | ||||
3.4 | 350 | AC196125.3_FGT002 | hnRNP_G | zm-hnRNP-G2 | 1 | f | 295085374 | 295086573 | RRM 1; CCHC 1 | ||||
3.4 | 555 | AC233865.1_FGT006 | hnRNP_P2 | zm-hnRNP-P | 7 | r | 140975270 | 140978720 | RRM 1; ZnF_RBZ 2 | ||||
3.4 | 639 | GRMZM2G417223_T01 | hnRNP_E1/E2 | zm-hnRNP-E | 5 | f | 17104231 | 17110455 | KH 3 | ||||
3.4 | 746 | GRMZM2G159028_T01 | hnRNP_F/hnRNP_H | zm-hnRNP-F/AtRNPH/F_ | 6 | r | 166991583 | 166994467 | RRM 2 | ||||
3.4 | 869 | GRMZM2G083783_T01 | hnRNP_G | zm-hnRNP-G1 | 1 | r | 259738160 | 259742434 | RRM 1; CCHC 1 | ||||
3.4 | 869 | GRMZM2G161242_T01 | hnRNP_G | zm-hnRNP-G2 | 5 | f | 13529852 | 13534644 | RRM 1; CCHC 1 | ||||
3.4 | 980 | GRMZM2G159028_T02 | hnRNP_F/hnRNP_H | zm-hnRNP-H | 6 | r | 166991583 | 166994467 | RRM 2 | ||||
3.5 | 107 | GRMZM2G055276_T01 | hnRNP-like_5 | zmAth1 | 3 | f | 200643557 | 200646807 | HANP4_PAI-RBP! 1 | ||||
3.5 | 107 | GRMZM2G116282_T02 | hnRNP-like_5 | zmAth2 | 3 | r | 200468027 | 200471513 | HANP4_PAI-RBP! 1 | ||||
3.5 | 107 | GRMZM2G464401_T01 | hnRNP-like_5 | zmAth3 | 8 | f | 76258875 | 76262250 | HANP4_PAI-RBP! 1 | ||||
3.5 | 137 | GRMZM2G090908_T01 | hnRNP-like_1 | zmUBP1b | 4 | f | 5234570 | 5241151 | RRM 3 | ||||
3.5 | 137 | GRMZM2G090908_T02 | hnRNP-like_1 | zmUBP1b | 4 | f | 5234570 | 5241151 | RRM 3 | ||||
3.5 | 146 | GRMZM2G002874_T01 | hnRNP-like_3 | zmRBP45a-1 | 5 | f | 20661741 | 20664358 | RRM 3 | ||||
3.5 | 146 | GRMZM2G426591_T01 | hnRNP-like_3 | zmRBP45a-2 | 4 | f | 28187224 | 28194149 | RRM 3 | ||||
3.5 | 146 | GRMZM2G426591_T03 | hnRNP-like_3 | zmRBP45a-2 | 4 | f | 28187231 | 28193913 | RRM 3 | ||||
3.5 | 146 | GRMZM2G426591_T04 | hnRNP-like_3 | zmRBP45a-2 | 4 | f | 28187242 | 28193066 | RRM 3 | ||||
3.5 | 410 | GRMZM2G168163_T01 | hnRNP-like_4 | zmRBP47c-1 | 2 | f | 183982408 | 183987262 | RRM 3 | ||||
3.5 | 410 | GRMZM2G168163_T02 | hnRNP-like_4 | zmRBP47c-1 | 2 | f | 183982468 | 183987232 | RRM 3 | ||||
3.5 | 410 | GRMZM2G467907_T01 | hnRNP-like_4 | zmRBP47c-2 | 7 | f | 121396030 | 121401077 | RRM 3 | ||||
3.5 | 636 | GRMZM2G142557_T01 | hnRNP-like_3 | zmRBP45d | 1 | f | 15677704 | 15686511 | RRM 3 |
4. Novel spliceosome proteins
Group |
CIWOG |
Gene |
hHomologs |
SeHomologs |
Gene Name |
Chr |
str |
from |
to |
Txn |
Domains |
Transcripts |
|
4.1 | 148 | GRMZM2G028834_T01 | eIF3 | sub2 | zm-eIF3sub2a-1 | 2 | f | 230892041 | 230897052 | WD40 4 | |||
4.1 | 148 | GRMZM2G028834_T02 | eIF3 | sub2 | zm-eIF3sub2a-1 | 2 | f | 230892061 | 230896927 | WD40 4 | |||
4.1 | 148 | GRMZM2G028834_T03 | eIF3 | sub2 | zm-eIF3sub2a-1 | 2 | f | 230892061 | 230896619 | WD40 4 | |||
4.1 | 148 | GRMZM2G143330_T01 | eIF3 | sub2 | zm-eIF3sub2a-2 | 7 | r | 7394067 | 7397862 | WD40 4 | |||
4.1 | 206 | GRMZM2G461356_T01 | hTHO2 | zmTHO2 | 3 | r | 207237233 | 207248388 | Tho2 | ||||
4.1 | 254 | GRMZM2G069099_T01 | KIAA0983 | zmKIAA0983-1 | 5 | f | 209293851 | 209300093 | Fimp 1 | ||||
4.1 | 254 | GRMZM2G069099_T02 | KIAA0983 | zmKIAA0983-1 | 5 | f | 209293851 | 209299639 | Fimp 1 | ||||
4.1 | 254 | GRMZM2G069099_T03 | KIAA0983 | zmKIAA0983-1 | 5 | f | 209293851 | 209299639 | Fimp 1 | ||||
4.1 | 254 | GRMZM2G069099_T04 | KIAA0983 | zmKIAA0983-1 | 5 | f | 209293851 | 209298124 | Fimp 1 | ||||
4.1 | 254 | GRMZM2G069099_T05 | KIAA0983 | zmKIAA0983-1 | 5 | f | 209293851 | 209298056 | Fimp 1 | ||||
4.1 | 291 | GRMZM2G038313_T01 | eIF3_sub6 | zm-eIF3sub6-1 | 7 | f | 19369248 | 19374017 | |||||
4.1 | 291 | GRMZM2G151549_T01 | eIF3_sub6 | zm-eIF3sub6-2 | 2 | f | 157703300 | 157708583 | |||||
4.1 | 291 | GRMZM2G151549_T02 | eIF3_sub6 | zm-eIF3sub6-2 | 2 | f | 157703300 | 157707449 | |||||
4.1 | 335 | GRMZM2G420856_T01 | C21orf66 | zmC21orf66-1 | 1 | r | 297968341 | 297972905 | |||||
4.1 | 335 | GRMZM2G420856_T02 | C21orf66 | zmC21orf66-1 | 1 | r | 297968819 | 297972905 | |||||
4.1 | 335 | GRMZM2G446648_T01 | C21orf66 | zmC21orf66-2 | 9 | r | 44637798 | 44643380 | |||||
4.1 | 400 | GRMZM2G006673_T01 | hHPR1 | zmHPR1 | 1 | f | 2831646 | 2844275 | |||||
4.1 | 400 | GRMZM2G006673_T02 | hHPR1 | zmHPR1 | 1 | f | 2831665 | 2844276 | |||||
4.1 | 400 | GRMZM2G006673_T03 | hHPR1 | zmHPR1 | 1 | f | 2833586 | 2844275 | |||||
4.1 | 483 | AC197118.3_FGT005 | HsKin17 | Rts2p | zmKin17-1 | 5 | r | 78117505 | 78118779 | ||||
4.1 | 483 | GRMZM2G117441_T01 | HsKin17 | Rts2p | zmKin17-2 | 4 | f | 243294923 | 243296755 | ||||
4.1 | 541 | GRMZM2G058966_T02 | CF_I-25kD | zmCFI-25kD-1 | 2 | f | 907869 | 918846 | |||||
4.1 | 541 | GRMZM2G074787_T01 | CF_I-25kD | zmCFI-25kD-2 | 10 | f | 148122365 | 148127172 | |||||
4.1 | 541 | GRMZM2G074787_T02 | CF_I-25kD | zmCFI-25kD-2 | 10 | f | 148122431 | 148127262 | |||||
4.1 | 1205 | GRMZM2G118104_T01 | CF_I-25kD | zmCFI-25kD | 4 | f | 81901791 | 81904085 | |||||
4.2 | 32 | GRMZM2G013619_T01 | PAB1/PAB2 | zmPABP1/zmPAB1-1 | 10 | r | 128509641 | 128513019 | RRM 4 | ||||
4.2 | 32 | GRMZM2G102829_T01 | PAB1/PAB2 | zmPABP1/zmPAB1-2 | 2 | f | 159614859 | 159620572 | RRM 4 | ||||
4.2 | 32 | GRMZM2G102829_T02 | PAB1/PAB2 | zmPABP1/zmPAB1-2 | 2 | f | 159614859 | 159620222 | RRM 4 | ||||
4.2 | 32 | GRMZM2G352129_T01 | PAB1/PAB2 | zmPABP1/zmPAB1-2 | 2 | f | 31389087 | 31394708 | RRM 4 | ||||
4.2 | 468 | GRMZM2G412075_T01 | PAB1/PAB2 | zmPABP6/zmPAB7 | 9 | r | 134851913 | 134856257 | |||||
4.3 | 69 | GRMZM2G066440_T01 | p72 | p72-4/p72-3/p72-5 | 3 | f | 12040909 | 12047270 | DEAD 1; Helicase_C | ||||
4.3 | 69 | GRMZM2G077125_T01 | p72 | p72-4/p72-3/p72-5 | 8 | r | 135651862 | 135656859 | DEAD 1; Helicase_C | ||||
4.3 | 69 | GRMZM2G078826_T01 | p72 | p72-4/p72-3/p72-5 | 3 | r | 224903190 | 224908609 | DEAD 1; Helicase_C | ||||
4.3 | 69 | GRMZM2G078826_T02 | p72 | p72-4/p72-3/p72-5 | 3 | r | 224903211 | 224908609 | DEAD 1; Helicase_C | ||||
4.3 | 69 | GRMZM2G703415_T01 | p72 | p72-4/p72-3/p72-5 | 2 | f | 228318077 | 228324848 | DEAD 1; Helicase_C | ||||
4.3 | 69 | GRMZM2G703415_T02 | p72 | p72-4/p72-3/p72-5 | 2 | f | 228318077 | 228324534 | DEAD 1; Helicase_C | ||||
4.3 | 100 | GRMZM2G143246_T01 | p72 | p72-1 | 3 | f | 5378030 | 5383661 | DEAD 1; Helicase 1 | ||||
4.3 | 100 | GRMZM2G362850_T01 | p72 | p72-2 | 3 | r | 162186412 | 162191480 | DEAD 1; Helicase 1 | ||||
4.3 | 100 | GRMZM2G362850_T02 | p72 | p72-2 | 3 | r | 162186435 | 162191480 | DEAD 1; Helicase 1 | ||||
4.3 | 136 | GRMZM2G040995_T01 | KIAA0052 | zmKIAA0052a-1 | 9 | f | 27318379 | 27327045 | DEAD 1; DSHCT 1; H | ||||
4.3 | 136 | GRMZM2G040995_T02 | KIAA0052 | zmKIAA0052a-1 | 9 | f | 27318379 | 27326889 | DEAD 1; DSHCT 1; H | ||||
4.3 | 136 | GRMZM2G047949_T01 | KIAA0052 | zmKIAA0052a-2 | 8 | r | 17705681 | 17714756 | DEAD 1; DSHCT 1; H | ||||
4.3 | 339 | GRMZM2G000823_T01 | hDbp5 | Dbp5p | zmDbp5-1 | 1 | f | 12105850 | 12106918 | ||||
4.3 | 339 | GRMZM2G138041_T01 | hDbp5 | Dbp5p | zmDbp5-2 | 1 | f | 12107024 | 12109565 | ||||
4.3 | 462 | GRMZM2G043724_T01 | Abstrakt | (Ded1p) | zmAbstrakt-a | 9 | r | 126178173 | 126181305 | ||||
4.3 | 654 | AC190982.3_FGT008 | DDX35 | zmDDX35-1 | 3 | r | 3663203 | 3676950 | |||||
4.3 | 654 | GRMZM2G305060_T01 | DDX35 | zmDDX35-2 | 3 | r | 3655332 | 3676950 | |||||
4.3 | 654 | GRMZM2G305060_T02 | DDX35 | zmDDX35-2 | 3 | r | 3655355 | 3676950 | |||||
4.3 | 654 | GRMZM2G305060_T03 | DDX35 | zmDDX35-2 | 3 | r | 3655513 | 3676950 | |||||
4.4 | 404 | GRMZM2G049525_T01 | KIAA0073 | zmKIA0073 | 4 | r | 60767202 | 60773440 | |||||
4.4 | 404 | GRMZM2G049525_T02 | KIAA0073 | zmKIA0073 | 4 | r | 60767202 | 60773440 | |||||
4.4 | 404 | GRMZM2G049525_T03 | KIAA0073 | zmKIA0073 | 4 | r | 60767542 | 60773440 | |||||
4.4 | 652 | GRMZM2G118687_T01 | PPIase-like_3 | zmPPIL3 | 9 | f | 23710019 | 23714766 | |||||
4.4 | 652 | GRMZM2G118687_T03 | PPIase-like_3 | zmPPIL3 | 9 | f | 23710019 | 23713538 | |||||
4.4 | 745 | GRMZM2G007486_T02 | Cyp-60 | zmCYP-60 | 1 | f | 22761559 | 22765156 | |||||
4.4 | 751 | GRMZM2G036720_T01 | SDCCAG10 | zmSDCCAG10 | 3 | r | 219170978 | 219179296 | |||||
4.5 | 54 | GRMZM2G115755_T01 | CDCL2_p110 | zmCDCL2p110-1 | 5 | f | 181047686 | 181050996 | Pkinase_Tyr 1; Pkin | ||||
4.5 | 54 | GRMZM2G139038_T01 | CDCL2_p110 | zmCDCL2p110-1 | 2 | r | 35678475 | 35683246 | Pkinase_Tyr 1; Pkin | ||||
4.5 | 54 | GRMZM2G139038_T02 | CDCL2_p110 | zmCDCL2p110-1 | 2 | r | 35678482 | 35683246 | Pkinase_Tyr 1; Pkin | ||||
4.5 | 54 | GRMZM2G139038_T03 | CDCL2_p110 | zmCDCL2p110-1 | 2 | r | 35678574 | 35683246 | Pkinase_Tyr 1; Pkin | ||||
4.5 | 54 | GRMZM2G179097_T01 | CDCL2_p110 | zmCDCL2p110-1 | 10 | r | 126635050 | 126640933 | Pkinase_Tyr 1; Pkin | ||||
4.5 | 54 | GRMZM2G179097_T02 | CDCL2_p110 | zmCDCL2p110-1 | 10 | r | 126636161 | 126640933 | Pkinase_Tyr 1; Pkin | ||||
4.5 | 54 | GRMZM2G179097_T03 | CDCL2_p110 | zmCDCL2p110-1 | 10 | r | 126636189 | 126640933 | Pkinase_Tyr 1; Pkin | ||||
4.5 | 54 | GRMZM2G179097_T04 | CDCL2_p110 | zmCDCL2p110-1 | 10 | r | 126637174 | 126640933 | Pkinase_Tyr 1; Pkin | ||||
4.5 | 54 | GRMZM2G179097_T05 | CDCL2_p110 | zmCDCL2p110-1 | 10 | r | 126637174 | 126640933 | Pkinase_Tyr 1; Pkin | ||||
4.5 | 54 | GRMZM2G179097_T06 | CDCL2_p110 | zmCDCL2p110-1 | 10 | r | 126637411 | 126640933 | Pkinase_Tyr 1; Pkin | ||||
4.5 | 54 | GRMZM2G179097_T07 | CDCL2_p110 | zmCDCL2p110-1 | 10 | r | 126637411 | 126640933 | Pkinase_Tyr 1; Pkin | ||||
4.5 | 54 | GRMZM2G179097_T08 | CDCL2_p110 | zmCDCL2p110-1 | 10 | r | 126637569 | 126640933 | Pkinase_Tyr 1; Pkin | ||||
4.5 | 70 | AC233901.1_FGT001 | RNPC2 | zmNPC2a/zmNPC2b | 9 | r | 148422279 | 148430553 | RRM 2 | ||||
4.5 | 70 | GRMZM2G071589_T01 | RNPC2 | zmNPC2a/zmNPC2b | 5 | r | 31972843 | 31982874 | RRM 2 | ||||
4.5 | 70 | GRMZM2G071589_T02 | RNPC2 | zmNPC2a/zmNPC2b | 5 | r | 31972843 | 31982874 | RRM 2 | ||||
4.5 | 70 | GRMZM2G076597_T01 | RNPC2 | zmNPC2a/zmNPC2b | 1 | r | 237084901 | 237093023 | RRM 2 | ||||
4.5 | 70 | GRMZM2G076597_T02 | RNPC2 | zmNPC2a/zmNPC2b | 1 | r | 237085216 | 237093023 | RRM 2 | ||||
4.5 | 70 | GRMZM2G076597_T03 | RNPC2 | zmNPC2a/zmNPC2b | 1 | r | 237085216 | 237093023 | RRM 2 | ||||
4.5 | 99 | GRMZM2G084540_T01 | IMP3 | zmIMP3/KOC-1 | 1 | r | 65242497 | 65247702 | KH 4 | ||||
4.5 | 99 | GRMZM2G084540_T02 | IMP3 | zmIMP3/KOC-1 | 1 | r | 65243886 | 65247702 | KH 4 | ||||
4.5 | 99 | GRMZM2G084540_T03 | IMP3 | zmIMP3/KOC-1 | 1 | r | 65243889 | 65247702 | KH 4 | ||||
4.5 | 99 | GRMZM2G126120_T01 | IMP3 | zmIMP3/KOC-2 | 9 | r | 115386801 | 115392016 | KH 4 | ||||
4.5 | 99 | GRMZM2G126120_T02 | IMP3 | zmIMP3/KOC-2 | 9 | r | 115386801 | 115392016 | KH 4 | ||||
4.5 | 99 | GRMZM2G126120_T03 | IMP3 | zmIMP3/KOC-2 | 9 | r | 115386801 | 115392016 | KH 4 | ||||
4.5 | 180 | GRMZM2G151614_T01 | RBM5 | zmRBM5-1 | 8 | r | 154338004 | 154355004 | G-patch 1; RRM 2; | ||||
4.5 | 180 | GRMZM2G151614_T02 | RBM5 | zmRBM5-1 | 8 | r | 154341486 | 154355004 | G-patch 1; RRM 2; | ||||
4.5 | 180 | GRMZM2G173777_T01 | RBM5 | zmRBM5-2 | 7 | r | 43273716 | 43281341 | G-patch 1; RRM 2; | ||||
4.5 | 180 | GRMZM2G173777_T02 | RBM5 | zmRBM5-2 | 7 | r | 43273716 | 43281341 | G-patch 1; RRM 2; | ||||
4.5 | 180 | GRMZM2G173777_T03 | RBM5 | zmRBM5-2 | 7 | r | 43273845 | 43281341 | G-patch 1; RRM 2; | ||||
4.5 | 184 | AC212390.3_FGT005 | PMSCL2 | zmPMSCL2-1a | 1 | f | 237635506 | 237640040 | 3_5_exonuc 1; HRDC | ||||
4.5 | 184 | GRMZM2G000749_T01 | PMSCL2 | zmPMSCL2-1b | 1 | f | 12058742 | 12066799 | 3_5_exonuc 1; HRDC | ||||
4.5 | 184 | GRMZM2G000749_T02 | PMSCL2 | zmPMSCL2-1b | 1 | f | 12058742 | 12063762 | 3_5_exonuc 1; HRDC | ||||
4.5 | 184 | GRMZM2G000749_T03 | PMSCL2 | zmPMSCL2-1b | 1 | f | 12061509 | 12066799 | 3_5_exonuc 1; HRDC | ||||
4.5 | 184 | GRMZM2G118917_T01 | PMSCL2 | zmPMSCL2-1c | 1 | f | 237621005 | 237640428 | 3_5_exonuc 1; HRDC | ||||
4.5 | 184 | GRMZM2G118917_T02 | PMSCL2 | zmPMSCL2-1c | 1 | f | 237621005 | 237640427 | 3_5_exonuc 1; HRDC | ||||
4.5 | 207 | GRMZM2G055251_T01 | DKFZP586O0120 | zmDKFZP586O0120-1 | 5 | f | 67967905 | 67971463 | DUF1754 1 | ||||
4.5 | 207 | GRMZM2G055251_T02 | DKFZP586O0120 | zmDKFZP586O0120-1 | 5 | f | 67967905 | 67971463 | DUF1754 1 | ||||
4.5 | 207 | GRMZM2G055251_T04 | DKFZP586O0120 | zmDKFZP586O0120-1 | 5 | f | 67968006 | 67971453 | DUF1754 1 | ||||
4.5 | 207 | GRMZM2G094879_T01 | DKFZP586O0120 | zmDKFZP586O0120-2 | 8 | f | 151463250 | 151465052 | DUF1754 1 | ||||
4.5 | 207 | GRMZM2G094879_T02 | DKFZP586O0120 | zmDKFZP586O0120-2 | 8 | f | 151463250 | 151465052 | DUF1754 1 | ||||
4.5 | 207 | GRMZM2G094879_T03 | DKFZP586O0120 | zmDKFZP586O0120-2 | 8 | f | 151463259 | 151465052 | DUF1754 1 | ||||
4.5 | 261 | GRMZM2G038032_T01 | RACK1 | Asc1p | zmRACK1a-1 | 6 | r | 162962939 | 162965326 | WD40 5 | |||
4.5 | 261 | GRMZM2G040477_T01 | RACK1 | Asc1p | zmRACK1a-2 | 8 | f | 64034499 | 64036736 | WD40 5 | |||
4.5 | 289 | GRMZM2G113139_T01 | AcinusL | zmAcinusL-1 | 1 | f | 147907249 | 147912424 | SAP 1 | ||||
4.5 | 289 | GRMZM2G151387_T01 | AcinusL | zmAcinusL-2 | 9 | r | 116099110 | 116104522 | SAP 1 | ||||
4.5 | 289 | GRMZM2G151387_T02 | AcinusL | zmAcinusL-2 | 9 | r | 116098931 | 116103456 | SAP 1 | ||||
4.5 | 294 | GRMZM2G037683_T01 | hSmu-1/FLJ10805 | zmSmu-1a | 3 | r | 57966344 | 57971323 | |||||
4.5 | 294 | GRMZM2G139363_T01 | hSmu-1/FLJ10805 | zmSmu-1b | 3 | r | 57976750 | 57978274 | |||||
4.5 | 334 | GRMZM2G018697_T01 | TIP-49 | Rvb1p | zmTIP49 | 4 | r | 244617111 | 244623509 | ||||
4.5 | 334 | GRMZM2G018697_T02 | TIP-49 | Rvb1p | zmTIP49 | 4 | r | 244617111 | 244623490 | ||||
4.5 | 334 | GRMZM2G018697_T03 | TIP-49 | Rvb1p | zmTIP49 | 4 | r | 244618402 | 244623383 | ||||
4.5 | 340 | GRMZM2G132000_T01 | UBL5p | Hub1p | zmUBL5a | 2 | r | 142232053 | 142235744 | ||||
4.5 | 340 | GRMZM2G132000_T02 | UBL5p | Hub1p | zmUBL5a | 2 | r | 142232053 | 142235744 | ||||
4.5 | 340 | GRMZM2G132000_T03 | UBL5p | Hub1p | zmUBL5a | 2 | r | 142232397 | 142235744 | ||||
4.5 | 343 | GRMZM2G404377_T01 | KIAA1604 | zmKIAA1604 | 10 | f | 22165981 | 22168371 | |||||
4.5 | 406 | GRMZM2G477694_T01 | CA150 | zmCA150 | 5 | r | 26842048 | 26856898 | |||||
4.5 | 406 | GRMZM2G477694_T03 | CA150 | zmCA150 | 5 | r | 26842114 | 26846882 | |||||
4.5 | 408 | GRMZM2G116750_T01 | DGSI_protein | zmDGCR14-1 | 9 | r | 149598553 | 149600425 | |||||
4.5 | 408 | GRMZM2G136085_T01 | DGSI_protein | zmDGCR14-2 | 4 | f | 245517428 | 245519398 | |||||
4.5 | 408 | GRMZM2G417859_T01 | DGSI_protein | zmDGCR14-3 | 4 | f | 245549708 | 245552213 | |||||
4.5 | 465 | GRMZM2G384327_T01 | SF4/F23858 | zmSF4 | 7 | f | 154342774 | 154345094 | |||||
4.5 | 465 | GRMZM2G384327_T02 | SF4/F23858 | zmSF4 | 7 | f | 154342774 | 154344530 | |||||
4.5 | 465 | GRMZM2G384327_T03 | SF4/F23858 | zmSF4 | 7 | f | 154342774 | 154344530 | |||||
4.5 | 473 | GRMZM2G171232_T01 | NOSIP | zmNOSIP | 1 | f | 42327924 | 42330317 | |||||
4.5 | 476 | GRMZM2G114584_T03 | TFIP11/TIP39 | zmTFIP11/TIP39a | 3 | f | 118327006 | 118330186 | |||||
4.5 | 484 | AC194970.5_FGT009 | HsKin17 | Rts2p | zmKin17-1 | 2 | f | 204300275 | 204303338 | ||||
4.5 | 544 | GRMZM2G026614_T01 | PUF60 | zmCP33/PUF60like | 7 | r | 5965147 | 5967214 | |||||
4.5 | 544 | GRMZM2G026614_T03 | PUF60 | zmCP33/PUF60like | 7 | r | 5965147 | 5967164 | |||||
4.5 | 552 | GRMZM2G414496_T05 | Ku70 | zmKu70 | 2 | r | 230096644 | 230114027 | |||||
4.5 | 552 | GRMZM2G414496_T07 | Ku70 | zmKu70 | 2 | r | 230103246 | 230114114 | |||||
4.5 | 552 | GRMZM2G414496_T08 | Ku70 | zmKu70 | 2 | r | 230103369 | 230114114 | |||||
4.5 | 554 | GRMZM2G373653_T01 | ZNF183 | zmZNF183a | 4 | r | 230641638 | 230642669 | |||||
4.5 | 556 | AC217271.3_FGT002 | MFAP1 | zmMFAP1a | 4 | r | 193411651 | 193415471 | |||||
4.5 | 633 | GRMZM2G120784_T01 | MGC4238 | zmMORG1 | 4 | f | 112660718 | 112665675 | |||||
4.5 | 643 | GRMZM2G048819_T01 | PMSCL2 | zmPMSCL2-3 | 7 | r | 147188736 | 147210012 | |||||
4.5 | 643 | GRMZM2G048819_T02 | PMSCL2 | zmPMSCL2-3 | 7 | r | 147189239 | 147210012 | |||||
4.5 | 644 | GRMZM2G015592_T01 | PMSCL2 | zmRED | 3 | r | 228087635 | 228095571 | |||||
4.5 | 646 | GRMZM2G149138_T01 | FLJ90157/DKFZp434E22 | zmPSP1 | 4 | r | 118508209 | 118510693 | |||||
4.5 | 649 | GRMZM2G086236_T01 | FLJ10374 | zmCWF16-1 | 8 | f | 138841080 | 138847925 | |||||
4.5 | 651 | GRMZM2G072156_T01 | Cactin | zmCactin | 1 | f | 287958404 | 287965584 | |||||
4.5 | 748 | GRMZM2G104047_T01 | KIAA0853 | zmKIAA0853-1 | 8 | r | 146384473 | 146390317 | |||||
4.5 | 748 | GRMZM2G116592_T01 | KIAA0853 | zmKIAA0853-2 | 3 | f | 211643758 | 211649894 | |||||
4.5 | 749 | GRMZM2G176499_T01 | FLJ10634 | zmCAJ1/FLJ10634 | 1 | r | 8066330 | 8068984 | |||||
4.5 | 750 | GRMZM2G131482_T01 | FLJ10206 | zmFLJ10206 | 9 | f | 47664723 | 47691810 | |||||
4.5 | 750 | GRMZM2G131482_T02 | FLJ10206 | zmFLJ10206 | 9 | f | 47664723 | 47691810 | |||||
4.5 | 871 | GRMZM2G102964_T01 | MGC13125 | Cwc26p | zmMGC13125 | 9 | f | 143178132 | 143184168 |
5. Possible splicing related proteins
Group |
CIWOG |
Gene |
hHomologs |
SeHomologs |
Gene Name |
Chr |
str |
from |
to |
Txn |
Domains |
Transcripts |
|
5.1 | 106 | GRMZM2G152111_T01 | Splicing_factor_like | zmSFL1 | 5 | f | 61489680 | 61494519 | RRM 1 | ||||
5.1 | 106 | GRMZM2G152111_T02 | Splicing_factor_like | zmSFL1 | 5 | f | 61489680 | 61494519 | RRM 1 | ||||
5.1 | 106 | GRMZM2G152111_T03 | Splicing_factor_like | zmSFL1 | 5 | f | 61489680 | 61494519 | RRM 1 | ||||
5.1 | 106 | GRMZM2G152111_T04 | Splicing_factor_like | zmSFL1 | 5 | f | 61489680 | 61493232 | RRM 1 | ||||
5.1 | 106 | GRMZM2G152111_T06 | Splicing_factor_like | zmSFL1 | 5 | f | 61489680 | 61494519 | RRM 1 | ||||
5.1 | 205 | GRMZM2G162992_T01 | Splicing_factor_like | zmSFL3-1 | 4 | r | 235010954 | 235017211 | KH_1 2 | ||||
5.1 | 205 | GRMZM2G162992_T03 | Splicing_factor_like | zmSFL3-1 | 4 | r | 235011291 | 235017211 | KH_1 2 | ||||
5.1 | 205 | GRMZM2G177781_T01 | Splicing_factor_like | zmSFL3-2 | 5 | f | 152894045 | 152902474 | KH_1 2 | ||||
5.1 | 205 | GRMZM2G177781_T02 | Splicing_factor_like | zmSFL3-2 | 5 | f | 152896483 | 152902474 | KH_1 2 | ||||
5.1 | 224 | GRMZM2G070807_T01 | Splicing_factor_like | zmSFL6a-1 | 7 | f | 9781607 | 9788188 | Pro_isomerase 1 | ||||
5.1 | 224 | GRMZM2G070807_T02 | Splicing_factor_like | zmSFL6a-1 | 7 | f | 9781607 | 9788122 | Pro_isomerase 1 | ||||
5.1 | 224 | GRMZM2G070807_T03 | Splicing_factor_like | zmSFL6a-1 | 7 | f | 9781607 | 9788122 | Pro_isomerase 1 | ||||
5.1 | 224 | GRMZM2G070807_T04 | Splicing_factor_like | zmSFL6a-1 | 7 | f | 9781607 | 9784820 | Pro_isomerase 1 | ||||
5.1 | 224 | GRMZM2G070807_T05 | Splicing_factor_like | zmSFL6a-1 | 7 | f | 9782418 | 9788122 | Pro_isomerase 1 | ||||
5.1 | 224 | GRMZM2G367206_T03 | Splicing_factor_like | zmSFL6a-2 | 2 | r | 230466474 | 230471793 | Pro_isomerase 1 | ||||
5.1 | 224 | GRMZM2G367206_T04 | Splicing_factor_like | zmSFL6a-2 | 2 | r | 230466478 | 230471793 | Pro_isomerase 1 | ||||
5.1 | 224 | GRMZM2G367206_T05 | Splicing_factor_like | zmSFL6a-2 | 2 | r | 230466478 | 230471294 | Pro_isomerase 1 | ||||
5.1 | 542 | GRMZM2G170397_T01 | Splicing_factor_like | zmSFL6b | 7 | f | 8104481 | 8106515 | |||||
5.1 | 542 | GRMZM2G170397_T02 | Splicing_factor_like | zmSFL6b | 7 | f | 8104481 | 8106515 | |||||
5.1 | 542 | GRMZM2G170397_T03 | Splicing_factor_like | zmSFL6b | 7 | f | 8104481 | 8106515 | |||||
5.1 | 547 | GRMZM2G091449_T01 | Splicing_factor_like | zmSFL5 | 7 | r | 16870735 | 16884875 | |||||
5.1 | 641 | GRMZM2G042807_T01 | Splicing_factor_like | zmSFL4 | 2 | f | 161224622 | 161228372 | |||||
5.2 | 121 | GRMZM2G070831_T01 | DNA_binding_protein_ | zmDBP1a-1 | 2 | f | 222740921 | 222743823 | NOP5NT 1; NOSIC 1; | ||||
5.2 | 121 | GRMZM2G071873_T01 | DNA_binding_protein_ | zmDBP1a-2 | 1 | r | 172061040 | 172063717 | NOP5NT 1; NOSIC 1; | ||||
5.2 | 121 | GRMZM2G124576_T01 | DNA_binding_protein_ | zmDBP1a-3 | 1 | r | 59736115 | 59740257 | NOP5NT 1; NOSIC 1; | ||||
5.2 | 121 | GRMZM2G124576_T02 | DNA_binding_protein_ | zmDBP1a-3 | 1 | r | 59736126 | 59740257 | NOP5NT 1; NOSIC 1; | ||||
5.2 | 121 | GRMZM2G125148_T01 | DNA_binding_protein_ | zmDBP1a-4 | 9 | f | 125048481 | 125053008 | NOP5NT 1; NOSIC 1; | ||||
5.2 | 121 | GRMZM2G125148_T02 | DNA_binding_protein_ | zmDBP1a-4 | 9 | f | 125048481` | 125052642 | NOP5NT 1; NOSIC 1; | ||||
5.2 | 121 | GRMZM2G125148_T03 | DNA_binding_protein_ | zmDBP1a-4 | 9 | f | 125048481 | 125052642 | NOP5NT 1; NOSIC 1; | ||||
5.2 | 121 | GRMZM2G125148_T04 | DNA_binding_protein_ | zmDBP1a-4 | 9 | f | 125048433 | 125052639 | NOP5NT 1; NOSIC 1; | ||||
5.2 | 333 | GRMZM2G119088_T01 | RNA_binding_2 | zmRBD2b | 3 | r | 14134469 | 14136285 | |||||
5.2 | 338 | GRMZM2G402002_T01 | DNA_binding_protein_ | zmDBP2a | 6 | r | 167526854 | 167553204 | |||||
5.2 | 338 | GRMZM2G402002_T02 | DNA_binding_protein_ | zmDBP2a | 6 | r | 167544100 | 167553255 | |||||
5.2 | 341 | GRMZM2G063643_T01 | RNA_binding_1 | zmRBD1b-1 | 2 | f | 156054448 | 156059718 | |||||
5.2 | 341 | GRMZM2G063643_T02 | RNA_binding_1 | zmRBD1b-1 | 2 | f | 156054448 | 156059393 | |||||
5.2 | 341 | GRMZM2G472052_T01 | RNA_binding_1 | zmRBD1b-2 | 7 | r | 21079617 | 21090030 | |||||
5.2 | 341 | GRMZM2G472052_T02 | RNA_binding_1 | zmRBD1b-2 | 7 | r | 21084064 | 21090068 | |||||
5.2 | 401 | GRMZM2G011129_T01 | Chloroplast | RNA_Binding_31 | zmCP31a | 7 | r | 48611872 | 48615389 | ||||
5.2 | 1204 | GRMZM2G113513_T01 | Similar_to_RNA_bindi | zmRBD5 | 2 | f | 56155676 | 56158286 | |||||
5.3 | 258 | GRMZM2G142072_T01 | SPT5 | zmSPT5a | 9 | r | 8619558 | 8632607 | KOW 1; Supt5 2 | ||||
5.3 | 295 | GRMZM2G056393_T01 | Elongation_Factor(M) | zmEFMa | 1 | r | 296468378 | 296487698 | |||||
5.3 | 295 | GRMZM2G056393_T02 | Elongation_Factor(M) | zmEFMa | 1 | r | 296468495 | 296487698 | |||||
5.3 | 477 | GRMZM2G125531_T01 | Elongation_Factor | zmEF2 | 3 | r | 168610224 | 168614875 | |||||
5.3 | 477 | GRMZM2G125531_T02 | Elongation_Factor | zmEF2 | 3 | r | 168610224 | 168614875 | |||||
5.3 | 759 | GRMZM2G123719_T01 | Elongation_Factor | zmEF1-1 | 10 | r | 132894738 | 132898247 | |||||
5.3 | 759 | GRMZM2G371062_T01 | Elongation_Factor | zmEF1-2 | 2 | f | 22423987 | 22428063 | |||||
5.4 | 1096 | GRMZM2G421742_T01 | Glycine_Rich_Protein | zmGRPs-4 | 3 | r | 35412745 | 35413589 |