<h2>SRGD</h2>

Gene Groups

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Populus trichocarpa (Pt)

1. Small nuclear Ribonucleoprotein (snRNP)

Group

CIWOG

Gene

hHomologs

SeHomologs

Gene Name

Chr

str

from

to

Txn

Domains

Transcripts

1.1108jgi|Poptr1_1|709823|estExt_Genewise1_v1.C_LG_II0233SmD2ptSmD2-12r1505899915061121 Sm 1
1.1108jgi|Poptr1_1|814376|estExt_fgenesh4_kg.C_LG_XIV0024SmD2ptSmD2-214f57775925779599 Sm 1
1.1147jgi|Poptr1_1|714948|estExt_Genewise1_v1.C_LG_V0812SmD1SmD1ptSmD1-a15f1430652014308693 Sm 1
1.1147jgi|Poptr1_1|830114|estExt_fgenesh4_pm.C_LG_II0256SmD1SmD1ptSmD1-a22r36378213640140 Sm 1
1.1181jgi|Poptr1_1|737849|estExt_Genewise1_v1.C_LG_XVIII2933SmESmEptSmE-a1 Sm 1
1.1181jgi|Poptr1_1|746341|estExt_Genewise1_v1.C_1710010SmESmEptSmE-a2171f6096964451 Sm 1
1.1221jgi|Poptr1_1|552428|eugene3.00021743LSM4LSm4ptLSM42f1488995214891802 Sm 1
1.1336jgi|Poptr1_1|233042|gw1.XI.1022.1SmBSmB1ptSmB-a11r1462974314630570 Sm 1
1.1344jgi|Poptr1_1|550771|eugene3.00020086SmD3SmD3ptSmD3-b12r601537603008 Sm 1
1.1344jgi|Poptr1_1|715635|estExt_Genewise1_v1.C_LG_V2071SmD3SmD3ptSmD3-b25f1742191317423615 Sm 1
1.1469jgi|Poptr1_1|717040|estExt_Genewise1_v1.C_LG_VI0793SmGSmGptSmG-a-16f1393467713936341 Sm 1
1.1469jgi|Poptr1_1|735363|estExt_Genewise1_v1.C_LG_XVI2449SmGSmGptSmG-a-216f58015635803149 Sm 1
1.1472jgi|Poptr1_1|706444|estExt_Genewise1_v1.C_LG_I1870LSM7LSm7ptLSM7-11r1957439819576304 Sm 1
1.1472jgi|Poptr1_1|722752|estExt_Genewise1_v1.C_LG_IX3230LSM7LSm7ptLSM7-29f64323716434792 Sm 1
1.1479jgi|Poptr1_1|813708|estExt_fgenesh4_kg.C_LG_III0001LSM2LSm2ptLSM2-13r531944533864 Sm 1
1.1479jgi|Poptr1_1|814695|estExt_fgenesh4_kg.C_1630004LSM2LSm2ptLSM2-2163f409784413616 Sm 1
1.1539jgi|Poptr1_1|557672|eugene3.00090932LSM5LSm5ptLSM5/SAD1-19f58632465864549 Sm 1
1.1539jgi|Poptr1_1|641475|grail3.0053017102LSM5LSm5ptLSM5/SAD1-21r2027331920274853 Sm 1
1.1540jgi|Poptr1_1|578592|eugene3.00180816SmFSmFptSmF18r95249099528508 Sm 1
1.1545jgi|Poptr1_1|745826|estExt_Genewise1_v1.C_1580060LSM1LSm1ptLSM1b-1158f199718202274 Sm 1
1.1545jgi|Poptr1_1|830650|estExt_fgenesh4_pm.C_LG_III0051LSM1LSm1ptLSM1b-23r34341903436782 Sm 1
1.1548jgi|Poptr1_1|832613|estExt_fgenesh4_pm.C_LG_VIII0306LSM6LSm6ptLSM6a8f48257034826861 Sm 1
1.1550jgi|Poptr1_1|641478|grail3.0053017202LSM8LSm8ptLSM81r2027611120277916 Sm 1
1.1561jgi|Poptr1_1|643482|grail3.0003059101LSM3LSm3ptLSM3a-12f46786224680087 Sm 1
1.1561jgi|Poptr1_1|831544|estExt_fgenesh4_pm.C_LG_V0415LSM3LSm3ptLSM3a-25r1297325612975136 Sm 1
1.292jgi|Poptr1_1|249129|gw1.XIX.1529.1Luc7ptLuc7a19r73585987362127 DUF259 1
1.292jgi|Poptr1_1|742740|estExt_Genewise1_v1.C_870092Luc7ptLuc7b87f554234557822 DUF259 1
1.2208jgi|Poptr1_1|730568|estExt_Genewise1_v1.C_LG_XIV0085Prp39ptPrp39a-114f1265075612657227 HAT 7; TPR-like 1
1.2208jgi|Poptr1_1|816978|estExt_fgenesh4_pg.C_LG_II2553Prp39ptPrp39a-22r2376274823771899 HAT 7; TPR-like 1
1.2403jgi|Poptr1_1|219158|gw1.VII.3463.1U1-70KSnp1ptU1-70K7f1062506810626477 RRM 1
1.2463jgi|Poptr1_1|712203|estExt_Genewise1_v1.C_LG_III1414U1C_SubunitYhc1ptU1C3r44831084484444 C2H2 1; mrCtermi 3
1.2475jgi|Poptr1_1|572009|eugene3.00140054FBP11Prp40ptPrp40a-114f429028442109 WW 2; FF 5
1.2475jgi|Poptr1_1|767717|fgenesh4_pg.C_LG_IX000768FBP11Prp40ptPrp40a-29r49029864908345 WW 2; FF 5
1.2475jgi|Poptr1_1|829855|estExt_fgenesh4_pm.C_LG_I1075FBP11Prp40ptPrp40a-31r2749231927503272 WW 2; FF 5
1.2538jgi|Poptr1_1|817271|estExt_fgenesh4_pg.C_LG_III0864Related_to_Luc7-likeLuc7ptLuc7-rl-13r1049196610494228 DUF259 1
1.2538jgi|Poptr1_1|836384|estExt_fgenesh4_pm.C_290170Related_to_Luc7-likeLuc7ptLuc7-rl-229r34975643499906 DUF259 1
1.2981jgi|Poptr1_1|807512|fgenesh4_pm.C_LG_XIV000322U1A_SubunitMud1ptU1A-114f56981115701179 RRM 2
1.2981jgi|Poptr1_1|816688|estExt_fgenesh4_pg.C_LG_II1730U1A_SubunitMud1ptU1A-22r1516553415168709 RRM 2
1.3170jgi|Poptr1_1|562830|eugene3.00070768SF3a120/SAP114_SubunPrp21pptSAP114-1a-17r63682026370757 SWAP/Surp 2
1.3170jgi|Poptr1_1|801052|fgenesh4_pm.C_LG_V000144SF3a120/SAP114_SubunPrp21pptSAP114-1a-15f28047552807308 SWAP/Surp 2
1.3203jgi|Poptr1_1|577374|eugene3.00170116SF3b160/SAP155_SubunHsh155ptSAP15517r10662771070080 HEAT 1; ARM 2; SAP
1.3222jgi|Poptr1_1|771129|fgenesh4_pg.C_LG_XI000282SF3b150/SAP145_SubunCus1pptSF3b150-111f27296852736155 PSP 1; DUF382 1
1.3222jgi|Poptr1_1|817772|estExt_fgenesh4_pg.C_LG_IV0271SF3b150/SAP145_SubunCus1pptSF3b150-24r23596862366248 PSP 1; DUF382 1
1.3228jgi|Poptr1_1|641471|grail3.0053016901SF3b_14b/PHP5ARds3pptSF3b_14b/PHP5A-a-11r2026791220268244 UPF0123 1
1.3228jgi|Poptr1_1|649849|grail3.0001081901SF3b_14b/PHP5ARds3pptSF3b_14b/PHP5A-a-29f58678715868203 UPF0123 1
1.3228jgi|Poptr1_1|706561|estExt_Genewise1_v1.C_LG_I2118SF3b_14b/PHP5ARds3pptSF3b_14b/PHP5A-a-31r2027132520271657 UPF0123 1
1.3228jgi|Poptr1_1|833165|estExt_fgenesh4_pm.C_LG_IX0434SF3b_14b/PHP5ARds3pptSF3b_14b/PHP5A-a-49f58708505871182 UPF0123 1
1.3256jgi|Poptr1_1|803217|fgenesh4_pm.C_LG_VIII000172SF3b120/SAP130_SubunRse1pptSAP130a-18r26619292665948 CPSF_A 1; WD40-like
1.3256jgi|Poptr1_1|805547|fgenesh4_pm.C_LG_X000853SF3b120/SAP130_SubunRse1pptSAP130a-210f1838973018393710 CPSF_A 1; WD40-like
1.3347jgi|Poptr1_1|239906|gw1.XIII.155.1U2B''_SubunitMsl1pptU2B''a13r1232383712326841 RRM 2
1.3347jgi|Poptr1_1|836161|estExt_fgenesh4_pm.C_LG_XIX0309U2B''_SubunitMsl1pptU2B''b19r1148767711490717 RRM 2
1.3412jgi|Poptr1_1|548145|eugene3.00010586U2A'_SubunitLea1pptU2A-11r51877675191850 LRR 4
1.3412jgi|Poptr1_1|830906|estExt_fgenesh4_pm.C_LG_III0531U2A'_SubunitLea1pptU2A-23f1427362814278101 LRR 4
1.3460jgi|Poptr1_1|649901|grail3.0001086301p14Snu17pptP14-1a9f62041916204565 RRM 1
1.3460jgi|Poptr1_1|706505|estExt_Genewise1_v1.C_LG_I1980p14Snu17pptP14-1b1r1987161619871993 RRM 1
1.3461jgi|Poptr1_1|251016|gw1.XV.452.1p14Snu17pptSAP61-115r12410511246553 C2H2 1
1.3461jgi|Poptr1_1|569530|eugene3.00120183p14Snu17pptSAP61-212f16946281700030 C2H2 1
1.3466jgi|Poptr1_1|565775|eugene3.00100333SF3b_10ptSF3b10a-110f50089855010657 SF3b10 1
1.3466jgi|Poptr1_1|832840|estExt_fgenesh4_pm.C_LG_VIII0705SF3b_10ptSF3b10a-28f1133541211337181 SF3b10 1
1.3470jgi|Poptr1_1|424250|gw1.57.217.1SF3b53/SAP49_SubunitHsh49pptSAP49a57r17336001738333 RRM 2
1.3758jgi|Poptr1_1|667866|grail3.0025001901SF3a66/SAP62_SubunitPrp11pptSAP6216r86566768661936 C2H2 1
1.444jgi|Poptr1_1|558749|eugene3.00050364116kD_Subunit/elongaSnu114pptU5-116-2a5f31586153161872 EFG_C 1; GTP_EFTU
1.444jgi|Poptr1_1|562883|eugene3.00070821116kD_Subunit/elongaSnu114pptU5-116-2b7f72950647297910 EFG_C 1; GTP_EFTU
1.444jgi|Poptr1_1|562884|eugene3.00070822116kD_Subunit/elongaSnu114pptU5-116-2c7r73330047336119 EFG_C 1; GTP_EFTU
1.475jgi|Poptr1_1|296528|gw1.82.68.1200kD_Subunit/HelicaBrr2pptU5-200-182r348595379064 DEAD 1; Helicase_C
1.475jgi|Poptr1_1|773179|fgenesh4_pg.C_LG_XII000954200kD_Subunit/HelicaBrr2pptU5-200-212r1135857311366380 DEAD 1; Helicase_C
1.475jgi|Poptr1_1|776276|fgenesh4_pg.C_LG_XV000704200kD_Subunit/HelicaBrr2pptU5-200-315r71320457139797 DEAD 1; Helicase_C
1.4182jgi|Poptr1_1|592707|eugene3.00440042220kD_SubunitPrp8pptU5-220/Prp8a44f415915426917 Mov34 1
1.4259jgi|Poptr1_1|775952|fgenesh4_pg.C_LG_XV000380100kD_SubunitPrp28pptU5-100KD15r41326384134770 DEAD 1; Helicase_C
1.4402jgi|Poptr1_1|730490|estExt_Genewise1_v1.C_LG_XIII3357102KD/Prp6-likePrp6pptU5-102KD Ubiquitin 1; TPR 3
1.4405jgi|Poptr1_1|200128|gw1.IX.593.1116kD_Subunit/elongaSnu114pptU5-116-3a9r982003985053 EFG_C 1; GTP_EFTU
1.4405jgi|Poptr1_1|200140|gw1.IX.605.1116kD_Subunit/elongaSnu114pptU5-116-3b9r995861998914 EFG_C 1; GTP_EFTU
1.4405jgi|Poptr1_1|581305|eugene3.129250001116kD_Subunit/elongaSnu114pptU5-116-312925r1101173 EFG_C 1; GTP_EFTU
1.4413jgi|Poptr1_1|669672|grail3.0020036201116kD_Subunit/elongaSnu114pptU5-116-1a-118f1132651311331085 EFG_C 1; GTP_EFTU 1
1.4413jgi|Poptr1_1|832004|estExt_fgenesh4_pm.C_LG_VI0503116kD_Subunit/elongaSnu114pptU5-116-1a-26r1130807511312648 EFG_C 1; GTP_EFTU 1
1.4637jgi|Poptr1_1|813981|estExt_fgenesh4_kg.C_LG_VII002415kD_SubunitDib1pptU5-157f61245116126730 DIMI 1; Thioredoxin
1.4755jgi|Poptr1_1|574420|eugene3.0019089440kD_SubunitptU5-4019r1050912910510166 WD-40 7
1.41099jgi|Poptr1_1|173864|gw1.I.2464.1200kD_Subunit/HelicaBrr2pptU5-200-31f2167770221684845 DEAD 1; Sec63 1; Ru
1.5223jgi|Poptr1_1|826867|estExt_fgenesh4_pg.C_410046U4/U6-15.5KSnu13pptTri15.5-1a41f509769511509 Ribosomal_L7Ae 1
1.5260jgi|Poptr1_1|245102|gw1.XIV.1845.1U4/U6-61KDPrp31ptU5-61/Prp31a-114f38666353869891 Nop 1
1.5260jgi|Poptr1_1|552316|eugene3.00021631U4/U6-61KDPrp31ptU5-61/Prp31a-22f1363293513636482 Nop 1
1.5411jgi|Poptr1_1|227722|gw1.X.2419.1U4/U6-90K/SAP90Prp3pptSAP90-110f1848691318489265
1.5411jgi|Poptr1_1|765377|fgenesh4_pg.C_LG_VIII000391U4/U6-90K/SAP90Prp3pptSAP90-18r26009952603279
1.5756jgi|Poptr1_1|801796|fgenesh4_pm.C_LG_VI000143U4/U6-60K/SAP60Prp4pptSAP606r29681822971187 WD-40 7;SFM 1;WD40
1.6399jgi|Poptr1_1|413030|gw1.III.133.1Tri-110KDSAD1ptTri110-13r1355066413556473 SART-1 1
1.6399jgi|Poptr1_1|640254|grail3.0008027801Tri-110KDSAD1ptTri110-21f59559115958963 SART-1 1
1.6634jgi|Poptr1_1|578585|eugene3.00180809(U4/U6.U5)Tri-27kD/RY1ptTri-27kD/RY118f94076889408275
1.6638jgi|Poptr1_1|254809|gw1.XVI.748.1Tri-65_KDSnu66pptTri65a-116f676642680102 UCH 1; ZnF_UBP 1
1.6638jgi|Poptr1_1|560149|eugene3.00060108Tri-65_KDSnu66pptTri65a-26r641302645196 UCH 1; ZnF_UBP 1
1.6753jgi|Poptr1_1|729449|estExt_Genewise1_v1.C_LG_XIII0652hSnu23/FLJ31121Snu23pptSnu23 ZnF_U1 1
1.7225jgi|Poptr1_1|798383|fgenesh4_pm.C_LG_II000072U11/U12-25K(-99_protein)ptU11/U12-25K2r868774869723 C2H2 1
1.7346jgi|Poptr1_1|573888|eugene3.00190362U11/U12-65KptU11/U12-65K-119f47517584756940 RRM 2;PHOSPHOPANTET
1.7346jgi|Poptr1_1|729948|estExt_Genewise1_v1.C_LG_XIII1925U11/U12-65KptU11/U12-65K-2 RRM 2;PHOSPHOPANTET
1.7982jgi|Poptr1_1|782205|fgenesh4_pg.C_scaffold_64000067U11/U12-35KptU11/U12-35kD64r525721528733 RRM 1
1.71101jgi|Poptr1_1|228125|gw1.X.2822.1U11/U12-31K(MADP1)ptU11/U12-31K10f1941402419414413 RRM 1; CCHC 1

2. Splicing factors

Group

CIWOG

Gene

hHomologs

SeHomologs

Gene Name

Chr

str

from

to

Txn

Domains

Transcripts

2.149jgi|Poptr1_1|560016|eugene3.00051631U2AF35ptU2AF35/AUS-15r1781372417814542 RRM 1; CCHC 2;
2.149jgi|Poptr1_1|642753|grail3.0003001802U2AF35ptU2AF35/AUS-22f182016182837 RRM 1; CCHC 2;
2.149jgi|Poptr1_1|676151|grail3.0028027401U2AF35ptU2AF35/AUS-328f30891533090206 RRM 1; CCHC 2;
2.149jgi|Poptr1_1|741667|estExt_Genewise1_v1.C_660125U2AF35ptU2AF35/AUS-466r302589303547 RRM 1; CCHC 2;
2.155jgi|Poptr1_1|424261|gw1.57.228.1U2AF65ptU2AF65a/AULb57r17469161750282 RRM 3;
2.155jgi|Poptr1_1|719459|estExt_Genewise1_v1.C_LG_VII3407U2AF65ptU2AF65a/AULb7f1054039410543154 RRM 3;
2.172jgi|Poptr1_1|194989|gw1.IV.78.1PTB/hnRNP_IptPTB2a4r1230405912308822 RRM 2
2.172jgi|Poptr1_1|251120|gw1.XV.556.1PTB/hnRNP_IptPTB2b15r14905101496943 RRM 2
2.172jgi|Poptr1_1|259181|gw1.XVII.1172.1PTB/hnRNP_IptPTB2c17r49539024959068 RRM 2
2.1169jgi|Poptr1_1|410596|gw1.II.1931.1PTB/hnRNP_IptPTB1-12r44576964463256 RRM 4
2.1169jgi|Poptr1_1|714769|estExt_Genewise1_v1.C_LG_V0370PTB/hnRNP_IptPTB1-25f1325764813263036 RRM 4
2.1398jgi|Poptr1_1|414256|gw1.III.1359.1SF1/BBPptSF1/BBP-13f1034928310351343 RRM 1; CCHC 2; KH
2.1398jgi|Poptr1_1|423773|gw1.29.285.1SF1/BBPptSF1/BBP-229f33517973353908 RRM 1; CCHC 2; KH
2.1409jgi|Poptr1_1|229825|gw1.X.4522.1U2AF65ptAUL210r51778965180843 RRM 1
2.1481jgi|Poptr1_1|722993|estExt_Genewise1_v1.C_LG_IX3662CBP80Cbc2pptCBP809f74655697476971 MIF4G 1; ARM 3
2.1553jgi|Poptr1_1|596778|eugene3.00860069U2AF35_related_proteptUrp-186f549800552902 RRM 1; CCCH 2
2.1553jgi|Poptr1_1|681070|grail3.0086005901U2AF35_related_proteptUrp-286f547764548117 RRM 1; CCCH 2
2.1635jgi|Poptr1_1|718232|estExt_Genewise1_v1.C_LG_VII0586CBP20Cbc1ptCBP20-17f607713610948 RRM 1
2.1635jgi|Poptr1_1|836651|estExt_fgenesh4_pm.C_640064CBP20Cbc1ptCBP20-264r18183141821543 RRM 1
2.225jgi|Poptr1_1|409414|gw1.II.749.1SF2/ASFptSRp34-12r1498430714989319 RRM 2
2.225jgi|Poptr1_1|421685|gw1.XII.145.1SF2/ASFptSRp34-212r24045032407270 RRM 2
2.225jgi|Poptr1_1|773626|fgenesh4_pg.C_LG_XIII000080SF2/ASFptSRp30-313f10558941058048 RRM 2
2.225jgi|Poptr1_1|811208|fgenesh4_pm.C_scaffold_133000019SF2/ASFptSRp30-4133r316357318541 RRM 2
2.231jgi|Poptr1_1|248500|gw1.XIX.900.19G8ptRSZp21a-119f42614944265999 RRM 1; CCHC 1
2.231jgi|Poptr1_1|261622|gw1.XVIII.2163.19G8ptRSZp21a-218r69286966930309 RRM 1; CCHC 1
2.231jgi|Poptr1_1|583120|eugene3.014700059G8ptRSZp21a-3147r9544396675 RRM 1; CCHC 1
2.261jgi|Poptr1_1|645719|grail3.0067008905SC35ptSC35-13r13167811318407 RRM 1;
2.261jgi|Poptr1_1|709848|estExt_Genewise1_v1.C_LG_II0296SC35ptSC35-22r68778906879471 RRM 1;
2.2151jgi|Poptr1_1|256035|gw1.XVI.1974.1TASR-2ptSCL33-116r42521734253529 RRM 1
2.2151jgi|Poptr1_1|547618|eugene3.00010059TASR-2ptSCL33-21f436416439510 RRM 1
2.2204jgi|Poptr1_1|244286|gw1.XIV.1029.1Plant_Novel_SR_proteptRSp4114r19828241985712 RRM 2
2.2204jgi|Poptr1_1|253698|gw1.XV.3134.1Plant_Novel_SR_proteptRSp4015r98839649887020 RRM 2
2.2204jgi|Poptr1_1|411608|gw1.II.2943.1Plant_Novel_SR_proteptRSp412f1172704311730295 RRM 2
2.2204jgi|Poptr1_1|423171|gw1.XII.1631.1Plant_Novel_SR_proteptRSp4012f1325331013256156 RRM 2
2.2226jgi|Poptr1_1|245070|gw1.XIV.1813.1Plant_Novel_SR_proteptRSp31-114r37442773746315 RRM 2
2.2226jgi|Poptr1_1|552308|eugene3.00021623Plant_Novel_SR_proteptRSp31-22r1347961213481692 RRM 2
2.2292jgi|Poptr1_1|227475|gw1.X.2172.1TASR-2ptSCL30-110r1786642717869657 RRM 1
2.2292jgi|Poptr1_1|656109|grail3.0049021701TASR-2ptSCL30-28f31194483122875 RRM 1
2.2752jgi|Poptr1_1|250704|gw1.XV.140.1SF2/ASFptSRp34b15f320987323470 RRM 2
2.2978jgi|Poptr1_1|420699|gw1.VIII.2127.1TASR-2ptSCL28-18r1358766413588503 RRM 1
2.2978jgi|Poptr1_1|814124|estExt_fgenesh4_kg.C_LG_X0007TASR-2ptSCL28-210f38399173843639 RRM 1
2.313jgi|Poptr1_1|774677|fgenesh4_pg.C_LG_XIV000587hPrp43Prp43pptPrp4314r50858195089341 DEAD 1; Helicase_C
2.313jgi|Poptr1_1|799231|fgenesh4_pm.C_LG_II000920hPrp43Prp43pptPrp432f1640545416408817 DEAD 1; Helicase_C
2.3255jgi|Poptr1_1|819630|estExt_fgenesh4_pg.C_LG_VI1900SR140ptSR140-1a6f1810283318109362 Surp 1;RRM 1;RPR 1
2.3255jgi|Poptr1_1|825788|estExt_fgenesh4_pg.C_LG_XVIII0504SR140ptSR140-1b Surp 1;RRM 1;RPR 1
2.3549jgi|Poptr1_1|596786|eugene3.00860077SPF30ptSPF3086r632655636361 Tudor 1
2.3647jgi|Poptr1_1|235093|gw1.XI.3073.1SPF45ptSPF45-111f77679177771069 DIII/G-patch domain
2.3647jgi|Poptr1_1|798178|fgenesh4_pm.C_LG_I001181SPF45ptSPF45-21r3042744830429949 DIII/G-patch domain
2.41jgi|Poptr1_1|280872|gw1.261.22.1HSP73/HSPA8PtHSP73-1261f8232686183 Hsp70 1;
2.41jgi|Poptr1_1|280896|gw1.261.46.1HSP73/HSPA8PtHSP73-2261r151484154023 Hsp70 1;
2.41jgi|Poptr1_1|280909|gw1.261.59.1HSP73/HSPA8PtHSP73-3261r157545161408 Hsp70 1;
2.41jgi|Poptr1_1|563887|eugene3.00080482HSP73/HSPA8PtHSP73-48f29594002962010 Hsp70 1;
2.41jgi|Poptr1_1|563894|eugene3.00080489HSP73/HSPA8PtHSP73-58r29969912999597 Hsp70 1;
2.41jgi|Poptr1_1|569578|eugene3.00120231HSP73/HSPA8PtHSP73-612f21210872124025 Hsp70 1;
2.41jgi|Poptr1_1|570800|eugene3.00130164HSP73/HSPA8PtHSP73-713f11871121190039 Hsp70 1;
2.41jgi|Poptr1_1|587191|eugene3.02080008HSP73/HSPA8PtHSP73-8208r104093106060 Hsp70 1;
2.41jgi|Poptr1_1|587192|eugene3.02080009HSP73/HSPA8PtHSP73-9208f107951109918 Hsp70 1;
2.41jgi|Poptr1_1|675629|grail3.0261001101HSP73/HSPA8PtHSP73-10261r141289143595 Hsp70 1;
2.41jgi|Poptr1_1|711719|estExt_Genewise1_v1.C_LG_III0234HSP73/HSPA8PtHSP73-113f1320565513208558 Hsp70 1;
2.41jgi|Poptr1_1|765441|fgenesh4_pg.C_LG_VIII000455HSP73/HSPA8PtHSP73-128r30061653008329 Hsp70 1;
2.41jgi|Poptr1_1|800179|fgenesh4_pm.C_LG_III000644HSP73/HSPA8PtHSP73-133f1620213416204089 Hsp70 1;
2.41jgi|Poptr1_1|822482|estExt_fgenesh4_pg.C_LG_X1852HSP73/HSPA8PtHSP73-1410r1805045618052999 Hsp70 1;
2.41jgi|Poptr1_1|829431|estExt_fgenesh4_pm.C_LG_I0291HSP73/HSPA8PtHSP73-151r63906166393455 Hsp70 1;
2.41jgi|Poptr1_1|832542|estExt_fgenesh4_pm.C_LG_VIII0195HSP73/HSPA8PtHSP73-168r29902102992498 Hsp70 1;
2.4134jgi|Poptr1_1|200273|gw1.IX.738.1G10Cwc14pptG10-19r13455641346924 G10 1;
2.4134jgi|Poptr1_1|293379|gw1.66.52.1G10Cwc14pptG10-166f161328161978 G10 1;
2.4167jgi|Poptr1_1|554463|eugene3.00031096hSyf3/CRNClf1/Syf3pptCRN1a-13f1276683912771605 TPR 1; HAT 14; TPR
2.4167jgi|Poptr1_1|797324|fgenesh4_pm.C_LG_I000327hSyf3/CRNClf1/Syf3pptCRN1a-21r68965966901194 TPR 1; HAT 14; TPR
2.4168jgi|Poptr1_1|813818|estExt_fgenesh4_kg.C_LG_IV0063hSyf3/CRNClf1/Syf3pptCypE1a-14f1550719515507713 Pro_isomerase 1
2.4168jgi|Poptr1_1|816014|estExt_fgenesh4_pg.C_LG_II0204hSyf3/CRNClf1/Syf3pptCypE1a-22r12929331293451 Pro_isomerase 1
2.4168jgi|Poptr1_1|818813|estExt_fgenesh4_pg.C_LG_V1539hSyf3/CRNClf1/Syf3pptCypE1a-35f1672660516727123 Pro_isomerase 1
2.4168jgi|Poptr1_1|821113|estExt_fgenesh4_pg.C_LG_IX0365hSyf3/CRNClf1/Syf3pptCypE1a-49r23301042330622 Pro_isomerase 1
2.4288jgi|Poptr1_1|713683|estExt_Genewise1_v1.C_LG_IV2251hSyf1Syf1pptSyf14f20566942061387 TPR 1;HAT 10;TPRli
2.4297jgi|Poptr1_1|203457|gw1.IX.3922.1hECM2Ecm2pptECM2-1a-19r80148988017645 RRM 1; CCCH 1
2.4297jgi|Poptr1_1|557974|eugene3.00091234hECM2Ecm2pptECM2-1a-29r80234488026140 RRM 1; CCCH 1
2.4407jgi|Poptr1_1|574967|eugene3.00150362SPF27/BCAS2ptSPF2715r34956503497799 BCAS2 1
2.4414jgi|Poptr1_1|565819|eugene3.00100377hPrp19Prp19pptPrp19a-110f53737645381799 WD-40 7; Ubox 1
2.4414jgi|Poptr1_1|820827|estExt_fgenesh4_pg.C_LG_VIII1499hPrp19Prp19pptPrp19a-28f1155871811567138 WD-40 7; Ubox 1
2.4467jgi|Poptr1_1|725686|estExt_Genewise1_v1.C_LG_X3939PRL1Prp46pptPRL110r20824942087616 WD-40 2;WD40like 1
2.4471jgi|Poptr1_1|831321|estExt_fgenesh4_pm.C_LG_IV0542GCIP_p29Syf2ptGCIPp294f1595554915957360
2.4546jgi|Poptr1_1|550238|eugene3.00012679AD-002Cwc15pptAD-0021f3018002530182596 Cwf_Cwc_15 1
2.4559jgi|Poptr1_1|248127|gw1.XIX.527.1CDC5Cef1ptCDC5-119f22793792285422 SANT 2
2.4559jgi|Poptr1_1|571093|eugene3.00130457CDC5Cef1ptCDC5-213f33079613313850 SANT 2
2.4642jgi|Poptr1_1|555007|eugene3.00031640KIAA0560ptAquarius3f1716347517173809
2.4645jgi|Poptr1_1|578522|eugene3.00180746SKIPPrp45pptSKIP-118f87336568735491 SKIP/SNW 1
2.4645jgi|Poptr1_1|787442|fgenesh4_pg.C_scaffold_211000011SKIPPrp45pptSKIP-2211r182007183831 SKIP/SNW 1
2.4866jgi|Poptr1_1|817783|estExt_fgenesh4_pg.C_LG_IV0304MGC23918ptMGC239184r27563522757925
2.4983jgi|Poptr1_1|835479|estExt_fgenesh4_pm.C_LG_XVI0258PPIase-like_1ptPPIase-like116f55811625582771 Pro_isomerase 1
2.5122jgi|Poptr1_1|564516|eugene3.00081111hPrp4kinaseptPRP4K-18r76160407618866 Pkinase 1;TyrKc 1;
2.5220jgi|Poptr1_1|208803|gw1.V.4204.1TBL1-rp_1ptTBL1-rp1-15f57133705727206 WD-40 5; Peptidease
2.5220jgi|Poptr1_1|746796|estExt_Genewise1_v1.C_2050013TBL1-rp_1ptTBL1-rp1-2205f7249378945 WD-40 5; Peptidease
2.5464jgi|Poptr1_1|567580|eugene3.00102138N-CoR1ptN-CoR1-110r1888771618894908 SANT 2;Homeodomain_
2.5464jgi|Poptr1_1|820268|estExt_fgenesh4_pg.C_LG_VIII0326N-CoR1ptN-CoR1-28f21648722171987 SANT 2;Homeodomain_
2.5474jgi|Poptr1_1|821220|estExt_fgenesh4_pg.C_LG_IX0581FBP-21ptFBP219f37105133713658 C2H2 1
2.5543jgi|Poptr1_1|559701|eugene3.00051316Smc-1ptSmc15r1558363815597024 ATP_GTP_A_BS 1;SMC_
2.5868jgi|Poptr1_1|652518|grail3.0024018601NPW38ppNPW386r19218931922684 WW 2
2.665jgi|Poptr1_1|279773|gw1.226.19.1ALYptALY-1a226f121469122512 RRM 1;
2.665jgi|Poptr1_1|280851|gw1.261.1.1ALYptALY-1b261f1135912382 RRM 1;
2.665jgi|Poptr1_1|814194|estExt_fgenesh4_kg.C_LG_X0079ALYptALY-1c10r1814420018146972 RRM 1;
2.665jgi|Poptr1_1|815363|estExt_fgenesh4_pg.C_LG_I1776ALYptALY-1d1r1798665817993725 RRM 1;
2.680jgi|Poptr1_1|578196|eugene3.00180420UAP56ptUAP56-118r54988015503314 DEAD 1; Helicase_C
2.680jgi|Poptr1_1|819597|estExt_fgenesh4_pg.C_LG_VI1784UAP56ptUAP56-26r1713814717143156 DEAD 1; Helicase_C
2.6227jgi|Poptr1_1|198513|gw1.IV.3602.1ALYptALY-2a-14f68235696826436 RRM 1
2.6227jgi|Poptr1_1|756063|fgenesh4_pg.C_LG_II002243ALYptALY-2a-22r2117158921174991 RRM 1
2.6342jgi|Poptr1_1|172546|gw1.I.1146.1Srm160-likeptSRM102-11r1729805417298988 PWI 1
2.6342jgi|Poptr1_1|203587|gw1.IX.4052.1Srm160-likeptSRM102-29r82942068295174 PWI 1
2.6345jgi|Poptr1_1|823076|estExt_fgenesh4_pg.C_LG_XI1221RNPS1ptSR45/ptRNPS111r1369367413698833 RRM 1
2.6348jgi|Poptr1_1|551963|eugene3.00021278MagohptMagoh-12f1033358510335255 Mago_nashi 1
2.6348jgi|Poptr1_1|740188|estExt_Genewise1_v1.C_400263MagohptMagoh-240r786057787906 Mago_nashi 1
2.6417jgi|Poptr1_1|207980|gw1.V.3381.1Nuk-34/eIF4A3/DDX48ptDDX48/eIF4A3-1a5f27380182742542 DEAD 1; Helicase_C
2.6417jgi|Poptr1_1|832316|estExt_fgenesh4_pm.C_LG_VII0278Nuk-34/eIF4A3/DDX48ptDDX48/eIF4A3-1b7r64723896476775 DEAD 1; Helicase_C
2.6480jgi|Poptr1_1|172155|gw1.I.755.1Y14ptY14-11r1636172916363828 RRM 1; RBMB 4
2.6480jgi|Poptr1_1|203151|gw1.IX.3616.1Y14ptY14-29r73325147334867 RRM 1; RBMB 4
2.6650jgi|Poptr1_1|181346|gw1.I.9946.1pininptPinin-11f1185666411861151 Pinin/SDK/memA 1
2.6650jgi|Poptr1_1|415184|gw1.III.2287.1pininptPinin-23f11243981129268 Pinin/SDK/memA 1
2.713jgi|Poptr1_1|569452|eugene3.00120105Prp22Prp22ptPrp2212r898018902346 DEAD 1; Helicase_C
2.713jgi|Poptr1_1|586590|eugene3.01970032Prp22Prp22ptPrp22197f313018317433 DEAD 1; Helicase_C
2.7415jgi|Poptr1_1|559562|eugene3.00051177Prp18Prp18ptPrp18-15r1454784614549816 Prp18 1; SFM 1
2.7416jgi|Poptr1_1|229948|gw1.X.4645.1Prp18Prp18ptPrp17-1a10r54862585487811 WD-40 7;
2.7416jgi|Poptr1_1|565006|eugene3.00081601Prp18Prp18ptPrp17-1b8r1163804711640386 WD-40 7;
2.7551jgi|Poptr1_1|574877|eugene3.00150272Slu7Slu7pptSLU7-1a-115r24303352434404
2.7551jgi|Poptr1_1|772815|fgenesh4_pg.C_LG_XII000590Slu7Slu7pptSLU7-1a-212r69348166938829
2.7747jgi|Poptr1_1|730261|estExt_Genewise1_v1.C_LG_XIII2644Prp17Prp17pptPrp17 WD-40 6
2.71102jgi|Poptr1_1|804866|fgenesh4_pm.C_LG_X000172Prp22Prp22ptPrp22-310f60336006043461 DEAD 1;Helicase_C
2.71103jgi|Poptr1_1|421406|gw1.VIII.2834.1Prp22Prp22ptPrp22-28f60155256021125 DEAD 1;Helicase_C
2.813jgi|Poptr1_1|250837|gw1.XV.273.1Prp2ptPrp215f588737607440 DEAD 1; Helicase_C
2.813jgi|Poptr1_1|659337|grail3.0154005801Prp2ptPrp2-1a10r1563857115640070 DEAD 1; Helicase_C
2.8293jgi|Poptr1_1|752830|fgenesh4_pg.C_LG_I002433SRm300ptSRM300like-11r2506248625069242 RRM 1; Filamin/ABP28
2.8293jgi|Poptr1_1|827541|estExt_fgenesh4_pg.C_880014SRm300ptSRM300like-288f161579165721 RRM 1; Filamin/ABP28
2.8296jgi|Poptr1_1|411630|gw1.II.2965.1Prp5ptPrp5-1a-12r209205212546 DEAD 1; Helicase_C
2.8296jgi|Poptr1_1|715705|estExt_Genewise1_v1.C_LG_V2253Prp5ptPrp5-1a-25f1777974117782428 DEAD 1; Helicase_C
2.8478jgi|Poptr1_1|833248|estExt_fgenesh4_pm.C_LG_IX0568hTra-2/SFRS10ptTra/SFRS19r80107288012506 RRM 1
2.8754jgi|Poptr1_1|552542|eugene3.00021857Prp5ptPrp52r1619412216198576 DEAD 1;Helicase_C
2.8979jgi|Poptr1_1|825797|estExt_fgenesh4_pg.C_LG_XVIII0523hDbr1dbr1ptDbr1 Metallophos 1;DBRI

3. Splicing regulation

Group

CIWOG

Gene

hHomologs

SeHomologs

Gene Name

Chr

str

from

to

Txn

Domains

Transcripts

3.171jgi|Poptr1_1|423025|gw1.XII.1485.1Lammer/CLKkinaseptAFC1/ptAFC212r1075616610759468 Pkinase 1; TyrKc 1
3.171jgi|Poptr1_1|576599|eugene3.00160734Lammer/CLKkinaseptAFC1/ptAFC216f60051946009019 Pkinase 1; TyrKc 1
3.171jgi|Poptr1_1|802264|fgenesh4_pm.C_LG_VI000611Lammer/CLKkinaseptAFC1/ptAFC26f1406234614066002 Pkinase 1; TyrKc 1
3.171jgi|Poptr1_1|821865|estExt_fgenesh4_pg.C_LG_X0554Lammer/CLKkinaseptAFC1/ptAFC210f67396146743226 Pkinase 1; TyrKc 1
3.171jgi|Poptr1_1|824707|estExt_fgenesh4_pg.C_LG_XV0599Lammer/CLKkinaseptAFC1/ptAFC215r64349356438181 Pkinase 1; TyrKc 1
3.1135jgi|Poptr1_1|282386|gw1.28.960.1KinaseSRPK2ptSRPK2a-128r29593452964106 Pkinase 1; TyrKc 1
3.1135jgi|Poptr1_1|556921|eugene3.00090181KinaseSRPK2ptSRPK2a-29f10407391043005 Pkinase 1; TyrKc 1
3.1135jgi|Poptr1_1|782432|fgenesh4_pg.C_scaffold_66000047KinaseSRPK2ptSRPK2a-366r426503429348 Pkinase 1; TyrKc 1
3.1209jgi|Poptr1_1|586007|eugene3.01860014KinaseSRPK1ptSRPK1a-1186r148939152634 Pkinase 1; TyrKc 1
3.1209jgi|Poptr1_1|760368|fgenesh4_pg.C_LG_V000420KinaseSRPK1ptSRPK1a-25r35289773531823 Pkinase 1; TyrKc 1
3.1290jgi|Poptr1_1|417697|gw1.VI.2070.1KinaseLammer/CLK_kinaseptAFC36f1653464816538295 Pkinase 1;TyrKc 1;S
3.245jgi|Poptr1_1|296498|gw1.82.38.1Glycine-Rich_RBDptGRBP1d/GRBP1c/GRBP1e-182r246572247558 RRM 1
3.245jgi|Poptr1_1|421559|gw1.XII.19.1Glycine-Rich_RBDptGRBP1d/GRBP1c/GRBP1e-212r57981775799155 RRM 1
3.245jgi|Poptr1_1|679310|grail3.5873000103Glycine-Rich_RBDptGRBP1d/GRBP1c/GRBP1e-35873r8651694 RRM 1
3.245jgi|Poptr1_1|707174|estExt_Genewise1_v1.C_LG_I3371Glycine-Rich_RBDptGRBP1d/GRBP1c/GRBP1e-41r2498392024985162 RRM 1
3.245jgi|Poptr1_1|836867|estExt_fgenesh4_pm.C_880007Glycine-Rich_RBDptGRBP1d/GRBP1c/GRBP1e-588r231343232555 RRM 1
3.2109jgi|Poptr1_1|201330|gw1.IX.1795.1Glycine-Rich_RBDptGRP7/ptGRBP3a9r31047313105365 RRM 1
3.2109jgi|Poptr1_1|712972|estExt_Genewise1_v1.C_LG_IV0527Glycine-Rich_RBDptGRP7/ptGRBP3a4f1444424614444994 RRM 1
3.329jgi|Poptr1_1|264910|gw1.119.33.1hnRNP_A/BPtRNPA/B-1119f488398490115 RRM 2
3.329jgi|Poptr1_1|269887|gw1.13888.4.1hnRNP_A/BPtRNPA/B-213888f3911039 RRM 2
3.329jgi|Poptr1_1|289077|gw1.44.290.1hnRNP_A/BPtRNPA/B-344r14877241489548 RRM 2
3.329jgi|Poptr1_1|550162|eugene3.00012603hnRNP_A/BPtRNPA/B-41r2932814629330829 RRM 2
3.329jgi|Poptr1_1|552695|eugene3.00002010hnRNP_A/BPtRNPA/B-52f1833429718336093 RRM 2
3.329jgi|Poptr1_1|568529|eugene3.00110543hnRNP_A/BPtRNPA/B-611f63706946373347 RRM 2
3.329jgi|Poptr1_1|834962|estExt_fgenesh4_pm.C_LG_XIV0454hnRNP_A/BPtRNPA/B-714f88001978805059 RRM 2
3.3149jgi|Poptr1_1|560285|eugene3.00060244hnRNP_A/BptUBA2a-16f16776801679104 RRM 2
3.3149jgi|Poptr1_1|835360|estExt_fgenesh4_pm.C_LG_XVI0055hnRNP_A/BptUBA2a-216f12185801220013 RRM 2
3.3257jgi|Poptr1_1|176403|gw1.I.5003.1hnRNP_A/BptUBA2c1r3099927531000402 RRM 2
3.3418jgi|Poptr1_1|229873|gw1.X.4570.1hnRNP_A/BptRNPA/B_1a10r52938735295875 RRM 2
3.3418jgi|Poptr1_1|421117|gw1.VIII.2545.1hnRNP_A/BptRNPA/B_1b8r1150332611505260 RRM 2
3.3655jgi|Poptr1_1|176264|gw1.I.4864.1hnRNP_A/BptRNP_N11r3016235530163760 RRM 2;HUDSXLRNA 2
3.31098jgi|Poptr1_1|173980|gw1.I.2580.1hnRNP_A/BptRNPA/B_8a1f2206980422071176 RRM 2; Eggshell 4
3.31500jgi|Poptr1_1|572005|eugene3.00140050hnRNP_A/BptAtRNPA/B14r393612395395 RRM 2
3.493jgi|Poptr1_1|219589|gw1.VII.3894.1hnRNP_R/QhnRNP-R3/ptPA/B-17r1162470711626129 RRM 3
3.493jgi|Poptr1_1|286468|gw1.40.228.1hnRNP_R/QhnRNP-R3/ptPA/B-240f671497673376 RRM 3
3.493jgi|Poptr1_1|412314|gw1.II.3649.1hnRNP_R/QhnRNP-R3/ptPA/B-32r1040213310403986 RRM 3
3.493jgi|Poptr1_1|741275|estExt_Genewise1_v1.C_570276hnRNP_R/QhnRNP-R3/ptPA/B-457f925314926739 RRM 3
3.4120jgi|Poptr1_1|199846|gw1.IX.311.1hnRNP_R/Qpt-hnRNP-R2a9r425580428029 RRM 3
3.4120jgi|Poptr1_1|256575|gw1.XVI.2514.1hnRNP_R/Qpt-hnRNP-R2b16f59010065903782 RRM 3
3.4120jgi|Poptr1_1|293793|gw1.66.466.1hnRNP_R/Qpt-hnRNP-R2c66f11192631122377 RRM 3
3.4120jgi|Poptr1_1|717692|estExt_Genewise1_v1.C_LG_VI2287hnRNP_R/Qpt-hnRNP-R2d6f1400298614006458 RRM 3
3.4179jgi|Poptr1_1|245147|gw1.XIV.1890.1hnRNP_R/Qpt-hnRNP-R114r40031064006958 RRM 3
3.4183jgi|Poptr1_1|246020|gw1.XIV.2763.1CUG-BPptCUG-BP1-114f63740596377936 RRM 3; HUDSXLRNA 4
3.4183jgi|Poptr1_1|799273|fgenesh4_pm.C_LG_II000962CUG-BPptCUG-BP1-22r1753144017535229 RRM 3; HUDSXLRNA 4
3.4337jgi|Poptr1_1|225956|gw1.X.653.1_ptFCA110r1403546314041983 RRM 2; WW 1
3.4350jgi|Poptr1_1|171415|gw1.I.15.1hnRNP_Gpt-hnRNP-G21r1196637311967035 RRM 1; CCHC 1
3.4555jgi|Poptr1_1|226485|gw1.X.1182.1hnRNP_P2pt-hnRNP-P-110f1552579215528916 RRM 1; ZnF_RBZ 2
3.4555jgi|Poptr1_1|564190|eugene3.00080785hnRNP_P2pt-hnRNP-P-28f53136195316482 RRM 1; ZnF_RBZ 2
3.4639jgi|Poptr1_1|729865|estExt_Genewise1_v1.C_LG_XIII1582hnRNP_E1/E2pt-hnRNP-E KH 3
3.4746jgi|Poptr1_1|650984|grail3.0026035501hnRNP_F/hnRNP_Hpt-hnRNP-F/AtRNPH/F_5r34476473448420 RRM 2
3.4867jgi|Poptr1_1|755673|fgenesh4_pg.C_LG_II001853_ptFCA22r1636128316367855 RRM 2; WW 1
3.4869jgi|Poptr1_1|725079|estExt_Genewise1_v1.C_LG_X2845_hnRNP_G10f1948422319488722 RRM 1; CCHC 1
3.4980jgi|Poptr1_1|172927|gw1.I.1527.1hnRNP_F/hnRNP_Hpt-hnRNP-H11r1868397618684734 RRM 2
3.4980jgi|Poptr1_1|821449|estExt_fgenesh4_pg.C_LG_IX1049hnRNP_F/hnRNP_Hpt-hnRNP-H29f71705747172449 RRM 2
3.5107jgi|Poptr1_1|286517|gw1.40.277.1hnRNP-like_5ptAth140r800736802807 HANP4_PAI-RBP! 1
3.5107jgi|Poptr1_1|830328|estExt_fgenesh4_pm.C_LG_II0615hnRNP-like_5ptAth22f1032220110325012 HANP4_PAI-RBP! 1
3.5107jgi|Poptr1_1|830730|estExt_fgenesh4_pm.C_LG_III0192hnRNP-like_5ptAth33f76190157622554 HANP4_PAI-RBP! 1
3.5107jgi|Poptr1_1|836308|estExt_fgenesh4_pm.C_290040hnRNP-like_5ptAth429f979191982581 HANP4_PAI-RBP! 1
3.5137jgi|Poptr1_1|281598|gw1.28.172.1hnRNP-like_1ptUBP1b-128f583635588022 RRM 3
3.5137jgi|Poptr1_1|645804|grail3.0037000401hnRNP-like_1ptUBP1b-23r33762363381068 RRM 3
3.5137jgi|Poptr1_1|673211|grail3.0158002202hnRNP-like_1ptUBP1b-3158f246951251811 RRM 3
3.5146jgi|Poptr1_1|663393|grail3.0055015001hnRNP-like_3ptRBP45a-113f81466138151027 RRM 3
3.5146jgi|Poptr1_1|713522|estExt_Genewise1_v1.C_LG_IV1715hnRNP-like_3ptRBP45a-24r485791490307 RRM 3
3.5146jgi|Poptr1_1|727110|estExt_Genewise1_v1.C_LG_XI0522hnRNP-like_3ptRBP45a-311f1338200413386943 RRM 3
3.5410jgi|Poptr1_1|286862|gw1.40.622.1hnRNP-like_4ptRBP47c-140r17901261793346 RRM 3
3.5410jgi|Poptr1_1|798901|fgenesh4_pm.C_LG_II000590hnRNP-like_4ptRBP47c-22r96323269634926 RRM 3
3.5636jgi|Poptr1_1|203044|gw1.IX.3509.1hnRNP-like_3ptRBP45d9f70949297097093 RRM 3
3.5870jgi|Poptr1_1|744254|estExt_Genewise1_v1.C_1300118hnRNP-like_4ptRBP47a-1130r432560436975 RRM 3
3.5870jgi|Poptr1_1|767539|fgenesh4_pg.C_LG_IX000590hnRNP-like_4ptRBP47a-29r37285273732800 RRM 3

4. Novel spliceosome proteins

Group

CIWOG

Gene

hHomologs

SeHomologs

Gene Name

Chr

str

from

to

Txn

Domains

Transcripts

4.1148jgi|Poptr1_1|720028|estExt_Genewise1_v1.C_LG_VIII0460eIF3sub2pt-eIF3sub2a-1 WD40 4
4.1148jgi|Poptr1_1|833555|estExt_fgenesh4_pm.C_LG_X0377eIF3sub2pt-eIF3sub2a-210r1057249610576013 WD40 4
4.1206jgi|Poptr1_1|249114|gw1.XIX.1514.1hTHO2ptTHO2-119f72960727322846 Tho2
4.1206jgi|Poptr1_1|813521|fgenesh4_pm.C_scaffold_87000014hTHO2ptTHO2-287f583046612168 Tho2
4.1254jgi|Poptr1_1|836447|estExt_fgenesh4_pm.C_400112KIAA0983ptKIAA0983-140r21820772185275 Fimp 1
4.1291jgi|Poptr1_1|576239|eugene3.00160374eIF3_sub6pt-eIF3sub6-116f26899142693185
4.1291jgi|Poptr1_1|652677|grail3.0024032201eIF3_sub6pt-eIF3sub6-26f31215873125353
4.1335jgi|Poptr1_1|560229|eugene3.00060188C21orf66ptC21orf66-16f13571111357569
4.1335jgi|Poptr1_1|563415|eugene3.00080010C21orf66ptC21orf66-28r6213463516
4.1335jgi|Poptr1_1|563417|eugene3.00080012C21orf66ptC21orf66-38r6613767808
4.1335jgi|Poptr1_1|761867|fgenesh4_pg.C_LG_VI000177C21orf66ptC21orf66-46f13421311344747
4.1400jgi|Poptr1_1|178378|gw1.I.6978.1hHPR1ptHPR1-11r17356051745271
4.1400jgi|Poptr1_1|414862|gw1.III.1965.1hHPR1ptHPR1-23f1760969117618926
4.1483jgi|Poptr1_1|567434|eugene3.00101992HsKin17Rts2pptKin17-110r1794980717951009
4.1483jgi|Poptr1_1|832545|estExt_fgenesh4_pm.C_LG_VIII0198HsKin17Rts2pptKin17-28f30412513042441
4.1541jgi|Poptr1_1|422416|gw1.XII.876.1CF_I-25kDptCFI-25kD-112r1289699212899767
4.1541jgi|Poptr1_1|734153|estExt_Genewise1_v1.C_LG_XV3300CF_I-25kDptCFI-25kD-215f1025592610258574
4.1976jgi|Poptr1_1|422815|gw1.XII.1275.1CPSF_160KptCPSF-160k12r24761782494323
4.11205jgi|Poptr1_1|819254|estExt_fgenesh4_pg.C_LG_VI0927CF_I-25kDptCFI-25kD6f82056968207786
4.232jgi|Poptr1_1|205083|gw1.V.484.1PAB1/PAB2ptPABP1/ptPAB1-15r1353680413540664 RRM 4
4.232jgi|Poptr1_1|205089|gw1.V.490.1PAB1/PAB2ptPABP1/ptPAB1-25r1354574413549568 RRM 4
4.232jgi|Poptr1_1|287102|gw1.40.862.1PAB1/PAB2ptPABP1/ptPAB1-340r23667482372408 RRM 4
4.232jgi|Poptr1_1|557410|eugene3.00090670PAB1/PAB2ptPABP1/ptPAB1-49r40831874086853 RRM 4
4.232jgi|Poptr1_1|815675|estExt_fgenesh4_pg.C_LG_I2562PAB1/PAB2ptPABP1/ptPAB1-51r2646366926467877 RRM 4
4.232jgi|Poptr1_1|816198|estExt_fgenesh4_pg.C_LG_II0583PAB1/PAB2ptPABP1/ptPAB1-62f42144254218517 RRM 4
4.232jgi|Poptr1_1|816470|estExt_fgenesh4_pg.C_LG_II1125PAB1/PAB2ptPABP1/ptPAB1-72f93705789377393 RRM 4
4.22282jgi|Poptr1_1|171859|gw1.I.459.1PAB1/PAB2ptPAB1/ptPAB21r1455888614560903
4.369jgi|Poptr1_1|173906|gw1.I.2506.1p72p72-4/p72-3/p72-51r2177256821777443 DEAD 1; Helicase_C
4.369jgi|Poptr1_1|226049|gw1.X.746.1p72p72-4/p72-3/p72-510r1435602314360791 DEAD 1; Helicase_C
4.369jgi|Poptr1_1|258671|gw1.XVII.662.1p72p72-4/p72-3/p72-517r28006402805993 DEAD 1; Helicase_C
4.3100jgi|Poptr1_1|252279|gw1.XV.1715.1p72p72-115r62517486254814 DEAD 1; Helicase 1
4.3100jgi|Poptr1_1|773054|fgenesh4_pg.C_LG_XII000829p72p72-212r1032060510324735 DEAD 1; Helicase 1
4.3100jgi|Poptr1_1|826955|estExt_fgenesh4_pg.C_440087p72p72-344r10693911076588 DEAD 1; Helicase 1
4.3136jgi|Poptr1_1|274323|gw1.164.165.1KIAA0052ptKIAA0052a-1164r434679442226 DEAD 1; DSHCT 1; H
4.3136jgi|Poptr1_1|297279|gw1.86.170.1KIAA0052ptKIAA0052a-286f559848569534 DEAD 1; DSHCT 1; H
4.3136jgi|Poptr1_1|819128|estExt_fgenesh4_pg.C_LG_VI0599KIAA0052ptKIAA0052a-36f51380175145292 DEAD 1; DSHCT 1; H
4.3339jgi|Poptr1_1|589531|eugene3.00280267hDbp5Dbp5pptDbp528r28386452844223
4.3462jgi|Poptr1_1|294891|gw1.70.344.1Abstrakt(Ded1p)ptAbstrakt-a170f789037790858
4.3462jgi|Poptr1_1|810609|fgenesh4_pm.C_scaffold_86000007Abstrakt(Ded1p)ptAbstrakt-a286f264400267040
4.3654jgi|Poptr1_1|831104|estExt_fgenesh4_pm.C_LG_IV0154DDX35ptDDX354r41174194127832
4.4404jgi|Poptr1_1|293354|gw1.66.27.1KIAA0073ptKIA0073-166r113265117265
4.4404jgi|Poptr1_1|721509|estExt_Genewise1_v1.C_LG_IX0757KIAA0073ptKIA0073-29f13743401380301
4.4652jgi|Poptr1_1|709764|estExt_Genewise1_v1.C_LG_II0068PPIase-like_3ptPPIL3-12r1117936611180899
4.4652jgi|Poptr1_1|730904|estExt_Genewise1_v1.C_LG_XIV0848PPIase-like_3ptPPIL3-214r15638421565423
4.4745jgi|Poptr1_1|209043|gw1.V.4444.1Cyp-60ptCYP-605r66430736646888
4.4751jgi|Poptr1_1|668739|grail3.0103003701SDCCAG10ptSDCCAG10-118r985130986846
4.4751jgi|Poptr1_1|802320|fgenesh4_pm.C_LG_VI000667SDCCAG10ptSDCCAG10-26r1505890515062305
4.554jgi|Poptr1_1|420612|gw1.VIII.2040.1CDCL2_p110ptCDCL2p110-18r1201902412022136 Pkinase_Tyr 1; Pkin
4.554jgi|Poptr1_1|821837|estExt_fgenesh4_pg.C_LG_X0468CDCL2_p110-ptCDCL2p110-110r60622736065713 Pkinase_Tyr 1; Pkin
4.570jgi|Poptr1_1|215702|gw1.VII.7.1RNPC2ptNPC2a/ptNPC2b7f1190689411915334 RRM 2
4.570jgi|Poptr1_1|648812|grail3.0045020701RNPC2ptNPC2a/ptNPC2b4r1599441515997365 RRM 2
4.570jgi|Poptr1_1|716366|estExt_Genewise1_v1.C_LG_V4376RNPC2ptNPC2a/ptNPC2b5f64562016463900 RRM 2
4.599jgi|Poptr1_1|194999|gw1.IV.88.1IMP3ptIMP3/KOC-14f1234422312346714 KH 4
4.599jgi|Poptr1_1|778532|fgenesh4_pg.C_LG_XVII000411IMP3ptIMP3/KOC-217f49770174979527 KH 4
4.5180jgi|Poptr1_1|289113|gw1.44.326.1RBM5ptRBM5-144r17131491721263 G-patch 1; RRM 2;
4.5180jgi|Poptr1_1|800597|fgenesh4_pm.C_LG_IV000284RBM5ptRBM5-24r73607607370841 G-patch 1; RRM 2;
4.5184jgi|Poptr1_1|241881|gw1.XIII.2130.1PMSCL2ptPMSCL2-1a13f46442614653653 3_5_exonuc 1; HRDC
4.5184jgi|Poptr1_1|248751|gw1.XIX.1151.1PMSCL2ptPMSCL2-1b19f55780345587242 3_5_exonuc 1; HRDC
4.5207jgi|Poptr1_1|209784|gw1.V.5185.1DKFZP586O0120ptDKFZP586O0120-15f1113527011136738 DUF1754 1
4.5207jgi|Poptr1_1|660030|grail3.0106002601DKFZP586O0120ptDKFZP586O0120-210r2012009820120382 DUF1754 1
4.5261jgi|Poptr1_1|574969|eugene3.00150364RACK1Asc1pptRACK1a-115f35246633526446 WD40 5
4.5261jgi|Poptr1_1|834267|estExt_fgenesh4_pm.C_LG_XII0164RACK1Asc1pptRACK1a-212r41584004160101 WD40 5
4.5289jgi|Poptr1_1|558581|eugene3.00050196AcinusLptAcinusL-15f16550771658909 SAP 1
4.5289jgi|Poptr1_1|718854|estExt_Genewise1_v1.C_LG_VII1973AcinusLptAcinusL-27f44333514437500 SAP 1
4.5294jgi|Poptr1_1|823135|estExt_fgenesh4_pg.C_LG_XI1348hSmu-1/FLJ10805ptSmu-111r1469656014702183
4.5334jgi|Poptr1_1|293726|gw1.66.399.1TIP-49Rvb1pptTIP4966f960864965115
4.5334jgi|Poptr1_1|556835|eugene3.00090095TIP-49Rvb1pptTIP499r550086555162
4.5340jgi|Poptr1_1|563737|eugene3.00080332UBL5pHub1pptUBL5a-18r19803241980545
4.5340jgi|Poptr1_1|680026|grail3.0066020701UBL5pHub1pptUBL5a-266f17598461760067
4.5343jgi|Poptr1_1|577016|eugene3.00161151KIAA1604ptKIAA160416f1150464711509821
4.5406jgi|Poptr1_1|564188|eugene3.00080783CA150ptCA1508f52982555301796
4.5408jgi|Poptr1_1|552692|eugene3.00002007DGSI_proteinptDGCR14-12f1830679218308336
4.5408jgi|Poptr1_1|775129|fgenesh4_pg.C_LG_XIV001039DGSI_proteinptDGCR14-214r90496279051177
4.5465jgi|Poptr1_1|173293|gw1.I.1893.1SF4/F23858ptSF4-11f1959396119598480
4.5465jgi|Poptr1_1|821392|estExt_fgenesh4_pg.C_LG_IX0951SF4/F23858ptSF4-29r64089586413509
4.5473jgi|Poptr1_1|568327|eugene3.00110341NOSIPptNOSIP-111r33902733392530
4.5473jgi|Poptr1_1|800358|fgenesh4_pm.C_LG_IV000045NOSIPptNOSIP-24r13491891351342
4.5473jgi|Poptr1_1|829094|estExt_fgenesh4_pg.C_24050001NOSIPptNOSIP-32405r9153116
4.5476jgi|Poptr1_1|574017|eugene3.00190491TFIP11/TIP39ptTFIP11/TIP39a19f62160576218129
4.5476jgi|Poptr1_1|807023|fgenesh4_pm.C_LG_XIII000323TFIP11/TIP39ptTFIP11/TIP39a13r65570836559779
4.5484jgi|Poptr1_1|257127|gw1.XVI.3066.1TIP-48ptRuvB/TIP48a-116r85305968533019
4.5484jgi|Poptr1_1|282331|gw1.28.905.1TIP-48ptRuvB/TIP48a-228f28498432852007
4.5544jgi|Poptr1_1|416424|gw1.VI.797.1PUF60ptCP33/PUF60like-16r1012393910125598
4.5544jgi|Poptr1_1|576481|eugene3.00160616PUF60ptCP33/PUF60like-216f47505674752461
4.5552jgi|Poptr1_1|235497|gw1.XI.3477.1Ku70ptKu7011r1012420310135050
4.5554jgi|Poptr1_1|731318|estExt_Genewise1_v1.C_LG_XIV1660ZNF183ptZNF183a14r34011323402354
4.5556jgi|Poptr1_1|809557|fgenesh4_pm.C_LG_XIX000122MFAP1ptMFAP1a-119r57226345724882
4.5556jgi|Poptr1_1|834576|estExt_fgenesh4_pm.C_LG_XIII0270MFAP1ptMFAP1a-213r49110934913518
4.5633jgi|Poptr1_1|815667|estExt_fgenesh4_pg.C_LG_I2540MGC4238ptMORG11f2623222226234416
4.5643jgi|Poptr1_1|409246|gw1.II.581.1PMSCL2ptPMSCL2-12f1952683819527977
4.5643jgi|Poptr1_1|755903|fgenesh4_pg.C_LG_II002083PMSCL2ptPMSCL2-22f1953338119534122
4.5644jgi|Poptr1_1|778660|fgenesh4_pg.C_LG_XVIII000028PMSCL2ptRED18r428535433068
4.5646jgi|Poptr1_1|266119|gw1.123.141.1FLJ90157/DKFZp434E22ptPSP1-1123f427975432346
4.5646jgi|Poptr1_1|759262|fgenesh4_pg.C_LG_IV000890FLJ90157/DKFZp434E22ptPSP1-24r86225708628041
4.5649jgi|Poptr1_1|728081|estExt_Genewise1_v1.C_LG_XI3018FLJ10374ptCWF16-111r75440597547457
4.5651jgi|Poptr1_1|589536|eugene3.00280272CactinptCactin28f28694952872822
4.5748jgi|Poptr1_1|574762|eugene3.00150157KIAA0853ptKIAA085315r10250041032171
4.5749jgi|Poptr1_1|557051|eugene3.00090311FLJ10634ptCAJ1/FLJ106349f18760581876984
4.5750jgi|Poptr1_1|569839|eugene3.00120492FLJ10206ptFLJ1020612r52194595227024
4.5871jgi|Poptr1_1|264661|gw1.118.149.1MGC13125Cwc26pptMGC13125118f540264546059
4.5977jgi|Poptr1_1|821615|estExt_fgenesh4_pg.C_LG_IX1388SPF31ptSPF31/Jiv-19r1005809010063697
4.5977jgi|Poptr1_1|829583|estExt_fgenesh4_pm.C_LG_I0582SPF31ptSPF31/Jiv-21r1551445515520151
4.51203jgi|Poptr1_1|554465|eugene3.00031098NuMAptCIP1/ptNuMA-13f1278559412789615
4.51203jgi|Poptr1_1|640386|grail3.0008039601NuMAptCIP1/ptNuMA-21r68800896883313

5. Possible splicing related proteins

Group

CIWOG

Gene

hHomologs

SeHomologs

Gene Name

Chr

str

from

to

Txn

Domains

Transcripts

5.1106jgi|Poptr1_1|424268|gw1.57.235.1Splicing_factor_likeptSFL57f7646277190 RRM 1
5.1205jgi|Poptr1_1|825640|estExt_fgenesh4_pg.C_LG_XVIII0149Splicing_factor_like-ptSFL3 KH_1 2
5.1224jgi|Poptr1_1|205618|gw1.V.1019.1Splicing_factor_likeptSFL6a-15f1497779714981033 Pro_isomerase 1
5.1224jgi|Poptr1_1|410986|gw1.II.2321.1Splicing_factor_likeptSFL6a-22r30206893023822 Pro_isomerase 1
5.1542jgi|Poptr1_1|665264|grail3.0085000302Splicing_factor_likeptSFL6b-119r16237181624242
5.1542jgi|Poptr1_1|665273|grail3.0085001101Splicing_factor_likeptSFL6b-219f18041081804632
5.1542jgi|Poptr1_1|836014|estExt_fgenesh4_pm.C_LG_XIX0027Splicing_factor_likeptSFL6b19r16896571690181
5.1547jgi|Poptr1_1|653445|grail3.0030006601Splicing_factor_likeptSFL56f1057053110571680
5.1641jgi|Poptr1_1|240443|gw1.XIII.692.1Splicing_factor_likeptSFL413r849590852913
5.2121jgi|Poptr1_1|241019|gw1.XIII.1268.1DNA_binding_protein_ptDBP1a-113r21184382121376 NOP5NT 1; NOSIC 1;
5.2121jgi|Poptr1_1|294922|gw1.70.375.1DNA_binding_protein_ptDBP1a-270f890920893863 NOP5NT 1; NOSIC 1;
5.2333jgi|Poptr1_1|821339|estExt_fgenesh4_pg.C_LG_IX0842RNA_binding_2ptRBD2b-19r54762805478802
5.2333jgi|Poptr1_1|829713|estExt_fgenesh4_pm.C_LG_I0815RNA_binding_2ptRBD2b-21f2064788820651319
5.2338jgi|Poptr1_1|234880|gw1.XI.2860.1DNA_binding_protein_ptDBP2a-111r68996856909355
5.2338jgi|Poptr1_1|753194|fgenesh4_pg.C_LG_I002797DNA_binding_protein_ptDBP2a-21r2871098128722128
5.2341jgi|Poptr1_1|836278|estExt_fgenesh4_pm.C_280159RNA_binding_1ptRBD1b28r35427263547672
5.2401jgi|Poptr1_1|570176|eugene3.00120829ChloroplastRNA_Binding_31ptCP31a-112f1080669510809618
5.2401jgi|Poptr1_1|835181|estExt_fgenesh4_pm.C_LG_XV0240ChloroplastRNA_Binding_31ptCP31a-215f64847646487337
5.21204jgi|Poptr1_1|819404|estExt_fgenesh4_pg.C_LG_VI1354Similar_to_RNA_bindiptRBD56r1379309113795131
5.3258jgi|Poptr1_1|648692|grail3.0045010901SPT5ptSPT5a-14f1507782515078321 KOW 1; Supt5 2
5.3258jgi|Poptr1_1|713135|estExt_Genewise1_v1.C_LG_IV0779SPT5ptSPT5a-24f1507987415081050 KOW 1; Supt5 2
5.3258jgi|Poptr1_1|721868|estExt_Genewise1_v1.C_LG_IX1543SPT5ptSPT5a-29r25921302593607 KOW 1; Supt5 2
5.3295jgi|Poptr1_1|554187|eugene3.00030820Elongation_Factor(M)ptEFMa-13r1056957910575999
5.3295jgi|Poptr1_1|744104|estExt_Genewise1_v1.C_1270270Elongation_Factor(M)ptEFMa-2127f784421791612
5.3477jgi|Poptr1_1|272324|gw1.150.139.1Elongation_FactorptEF2150r397962404517
5.3477jgi|Poptr1_1|297197|gw1.86.88.1Elongation_FactorptEF286f370123377862
5.3759jgi|Poptr1_1|711780|estExt_Genewise1_v1.C_LG_III0383Elongation_FactorptEF13r1093717010939811
5.41096jgi|Poptr1_1|820579|estExt_fgenesh4_pg.C_LG_VIII0955Glycine_Rich_ProteinptGRPs-48f68450726846178

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