<h2>SRGD</h2>

Gene Groups

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5.2 Nucleotide Binding proteins

Species

CIWOG

Gene

hHomologs

SeHomologs

Gene Name

Barta Name

Chr

str

from

to

Txn

Domains

Transcripts

At121AT3G05060.1DNA_binding_protein_atDBP1a3r14128671415966 NOP5NT 1; NOSIC 1;
At121AT5G27120.1DNA_binding_protein_atDBP1b5f95409259543871 NOP5NT 1; NOSIC 1;
At333AT5G58470.1RNA_binding_2atRBD2b5r2363770723640920
At338AT4G05420.1DNA_binding_protein_atDBP2b4f27461212752943
At338AT4G21100.1DNA_binding_protein_atDBP2a4r1125876111265463
At341AT2G38610.1RNA_binding_1atRBD1b2r1614711316149873
At401AT4G24770.1ChloroplastRNA_Binding_31atCP31a4r1276603012768040
At401AT5G50250.1ChloroplastRNA_Binding_31atCP31b5r2045248720454013
At1204AT5G06210.1Similar_to_RNA_bindiatRBD55f18784711879740
Gm121Glyma11g12200.1DNA_binding_protein_gmDBP1a-111r87103408714631 NOP5NT 1; NOSIC 1;
Gm121Glyma12g04400.1DNA_binding_protein_gmDBP1a-212r28969222901866 NOP5NT 1; NOSIC 1;
Gm121Glyma12g04400.2DNA_binding_protein_gmDBP1a-212r28969222901866 NOP5NT 1; NOSIC 1;
Gm333Glyma02g39640.1RNA_binding_2gmRBD2b-12f4489111244895481
Gm333Glyma11g29430.1RNA_binding_2gmRBD2b-211f3008789530090875
Gm333Glyma14g37690.1RNA_binding_2gmRBD2b-314f4699386647005398
Gm333Glyma18g06560.1RNA_binding_2gmRBD2b-418r51126815115923
Gm338Glyma05g30530.1DNA_binding_protein_gmDBP2a-15r3589690635912385
Gm338Glyma08g13680.1DNA_binding_protein_gmDBP2a-28r1000385810014764
Gm338Glyma12g08330.1DNA_binding_protein_gmDBP2a-312r60696056073455
Gm341Glyma03g00370.1RNA_binding_1gmRBD1b-13f161434166295
Gm341Glyma09g40820.1RNA_binding_1gmRBD1b-29f4563523745642452
Gm341Glyma09g40820.2RNA_binding_1gmRBD1b-29f4563523745642452
Gm341Glyma16g34750.1RNA_binding_1gmRBD1b-316r3730513037309306
Gm341Glyma18g44980.1RNA_binding_1gmRBD1b-418r5474577254752385
Gm401Glyma04g36420.1ChloroplastRNA_Binding_31gmCP31a-14f4293857642941592
Gm401Glyma04g36420.2ChloroplastRNA_Binding_31gmCP31a-14f4293857642941592
Gm401Glyma05g02800.1ChloroplastRNA_Binding_31gmCP31a-25f21391892141877
Gm401Glyma06g18470.1ChloroplastRNA_Binding_31gmCP31a-36r1479865914801423
Gm401Glyma17g13470.1ChloroplastRNA_Binding_31gmCP31a-417f1031124110313650
Gm1204Glyma03g35650.1Similar_to_RNA_bindigmRBD53f4278773042789485
Lj338chr6.CM0066.620.ncDNA_binding_protein_ljDBP2a6r5633519656344253
Lj341LjT28H07.110.ncRNA_binding_1ljRBD1b
Lj401chr4.CM0173.30.ndChloroplastRNA_Binding_31ljCP31a4f2956310129565905
Mt121IMGA|AC121244_28.2DNA_binding_protein_mtDBP1a-14r1917007319174863 NOP5NT 1; NOSIC 1;
Mt121IMGA|CT573507_3.2DNA_binding_protein_mtDBP1a-25r24295762433157 NOP5NT 1; NOSIC 1;
Mt121IMGA|CT963113_7.2DNA_binding_protein_mtDBP1a-3 NOP5NT 1; NOSIC 1;
Mt341IMGA|AC169178_21.2RNA_binding_1mtRBD1b7f1550964815515744
Os121LOC_Os03g22730.1DNA_binding_protein_osDBP1a-13r1312516913128611 NOP5NT 1; NOSIC 1;
Os121LOC_Os03g22740.1DNA_binding_protein_osDBP1a-23r1313252413135898 NOP5NT 1; NOSIC 1;
Os333LOC_Os01g07070.1RNA_binding_2osRBD2b1f33217743326179
Os333LOC_Os01g07070.2RNA_binding_2osRBD2b1f33217743326525
Os333LOC_Os01g07070.3RNA_binding_2osRBD2b1f33217903327256
Os333LOC_Os01g07070.4RNA_binding_2osRBD2b1f33217743326525
Os338LOC_Os05g51480.1DNA_binding_protein_osDBP2a5f2944921029457409
Os338LOC_Os05g51480.2DNA_binding_protein_osDBP2a5f2944921029457407
Os341LOC_Os07g12490.1RNA_binding_1osRBD1b7f71197247125463
Os401LOC_Os09g39180.1ChloroplastRNA_Binding_31osCP31a9r2250452222507074
Os1204LOC_Os04g33810.1Similar_to_RNA_bindiosRBD54f2031220220313764
Pp121estExt_fgenesh1_pm.C_220029DNA_binding_protein_ppDBP1a-122r14298591432633 NOP5NT 1; NOSIC 1;
Pp121estExt_fgenesh1_pg.C_110141DNA_binding_protein_ppDBP1a-211f19576491960330 NOP5NT 1; NOSIC 1;
Pp333estExt_fgenesh1_pg.C_4620015RNA_binding_2ppRBD2b-1462r139658141801
Pp333fgenesh2_pg.scaffold_148000004RNA_binding_2ppRBD2b-2148r4343244442
Pp338fgenesh1_pg.scaffold_458000001DNA_binding_protein_ppDBP2a-1458f2836236918
Pp338estExt_Genewise1.C_2030018DNA_binding_protein_ppDBP2a-2203f490994499247
Pt121jgi|Poptr1_1|241019|gw1.XIII.1268.1DNA_binding_protein_ptDBP1a-113r21184382121376 NOP5NT 1; NOSIC 1;
Pt121jgi|Poptr1_1|294922|gw1.70.375.1DNA_binding_protein_ptDBP1a-270f890920893863 NOP5NT 1; NOSIC 1;
Pt333jgi|Poptr1_1|821339|estExt_fgenesh4_pg.C_LG_IX0842RNA_binding_2ptRBD2b-19r54762805478802
Pt333jgi|Poptr1_1|829713|estExt_fgenesh4_pm.C_LG_I0815RNA_binding_2ptRBD2b-21f2064788820651319
Pt338jgi|Poptr1_1|234880|gw1.XI.2860.1DNA_binding_protein_ptDBP2a-111r68996856909355
Pt338jgi|Poptr1_1|753194|fgenesh4_pg.C_LG_I002797DNA_binding_protein_ptDBP2a-21r2871098128722128
Pt341jgi|Poptr1_1|836278|estExt_fgenesh4_pm.C_280159RNA_binding_1ptRBD1b28r35427263547672
Pt401jgi|Poptr1_1|570176|eugene3.00120829ChloroplastRNA_Binding_31ptCP31a-112f1080669510809618
Pt401jgi|Poptr1_1|835181|estExt_fgenesh4_pm.C_LG_XV0240ChloroplastRNA_Binding_31ptCP31a-215f64847646487337
Pt1204jgi|Poptr1_1|819404|estExt_fgenesh4_pg.C_LG_VI1354Similar_to_RNA_bindiptRBD56r1379309113795131
Sb121Sb01g035410.2DNA_binding_protein_sbDBP1a-11f5895858058962760 NOP5NT 1; NOSIC 1;
Sb121Sb03g044260.1DNA_binding_protein_sbDBP1a-23f7160925471613201 NOP5NT 1; NOSIC 1;
Sb333Sb03g005050.1RNA_binding_2sbRBD2b3r52547125256714
Sb338Sb09g030580.1DNA_binding_protein_sbDBP2a9f5913076359147065
Sb341Sb02g006770.1RNA_binding_1sbRBD1b2f86459128654651
Sb401Sb02g011330.1ChloroplastRNA_Binding_31sbCP31a2r1882838218831456
Sb1204Sb06g016070.1Similar_to_RNA_bindisbRBD56f4450982044512588
Vv121GSVIVT00031075001DNA_binding_protein_vvDBP1a14r54633685469345 NOP5NT 1; NOSIC 1;
Vv333GSVIVT00029111001RNA_binding_2vvRBD2b12f90883469100053
Vv338GSVIVT00028385001DNA_binding_protein_vvDBP2a10f43201444370448
Vv341GSVIVT00033645001RNA_binding_1vvRBD1b8f727223736003
Vv401GSVIVT00015937001ChloroplastRNA_Binding_31vvCP31a-117f1156457611567938
Vv401GSVIVT00020623001ChloroplastRNA_Binding_31vvCP31a-214f1592312815927552
Vv1204GSVIVT00021561001Similar_to_RNA_bindivvRBD58r1585718015859871
Zm121GRMZM2G070831_T01DNA_binding_protein_zmDBP1a-12f222740921222743823 NOP5NT 1; NOSIC 1;
Zm121GRMZM2G071873_T01DNA_binding_protein_zmDBP1a-21r172061040172063717 NOP5NT 1; NOSIC 1;
Zm121GRMZM2G124576_T01DNA_binding_protein_zmDBP1a-31r5973611559740257 NOP5NT 1; NOSIC 1;
Zm121GRMZM2G124576_T02DNA_binding_protein_zmDBP1a-31r5973612659740257 NOP5NT 1; NOSIC 1;
Zm121GRMZM2G125148_T01DNA_binding_protein_zmDBP1a-49f125048481125053008 NOP5NT 1; NOSIC 1;
Zm121GRMZM2G125148_T02DNA_binding_protein_zmDBP1a-49f125048481`125052642 NOP5NT 1; NOSIC 1;
Zm121GRMZM2G125148_T03DNA_binding_protein_zmDBP1a-49f125048481125052642 NOP5NT 1; NOSIC 1;
Zm121GRMZM2G125148_T04DNA_binding_protein_zmDBP1a-49f125048433125052639 NOP5NT 1; NOSIC 1;
Zm333GRMZM2G119088_T01RNA_binding_2zmRBD2b3r1413446914136285
Zm338GRMZM2G402002_T01DNA_binding_protein_zmDBP2a6r167526854167553204
Zm338GRMZM2G402002_T02DNA_binding_protein_zmDBP2a6r167544100167553255
Zm341GRMZM2G063643_T01RNA_binding_1zmRBD1b-12f156054448156059718
Zm341GRMZM2G063643_T02RNA_binding_1zmRBD1b-12f156054448156059393
Zm341GRMZM2G472052_T01RNA_binding_1zmRBD1b-27r2107961721090030
Zm341GRMZM2G472052_T02RNA_binding_1zmRBD1b-27r2108406421090068
Zm401GRMZM2G011129_T01ChloroplastRNA_Binding_31zmCP31a7r4861187248615389
Zm1204GRMZM2G113513_T01Similar_to_RNA_bindizmRBD52f5615567656158286

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