3.5 Other plant hnRNPs
Species |
CIWOG |
Gene |
hHomologs |
SeHomologs |
Gene Name |
Barta Name |
Chr |
str |
from |
to |
Txn |
Domains |
Transcripts |
|
| At | 107 | AT4G16830.1 | hnRNP-like_5 | Ath1 | 4 | f | 9470385 | 9472594 | HANP4_PAI-RBP! 1 | |||||
| At | 107 | AT4G17520.1 | hnRNP-like_5 | Ath2 | 4 | f | 9771297 | 9773592 | HANP4_PAI-RBP! 1 | |||||
| At | 107 | AT5G47210.1 | hnRNP-like_5 | Ath3 | 5 | r | 19169022 | 19171263 | HANP4_PAI-RBP! 1 | |||||
| At | 137 | AT1G17370.1 | hnRNP-like_1 | AtUBP1b | 1 | r | 5951542 | 5955037 | RRM 3 | |||||
| At | 137 | AT3G14100.1 | hnRNP-like_1 | AtUBP1c | 3 | f | 4672919 | 4676162 | RRM 3 | |||||
| At | 146 | AT4G27000.1 | hnRNP-like_3 | atRBP45c | 4 | r | 13554604 | 13557854 | RRM 3 | |||||
| At | 146 | AT5G54900.1 | hnRNP-like_3 | atRBP45a | 5 | f | 22295383 | 22298346 | RRM 3 | |||||
| At | 410 | AT1G47490.1 | hnRNP-like_4 | AtRBP47c | 1 | f | 17424669 | 17427475 | RRM 3 | |||||
| At | 410 | AT1G47500.1 | hnRNP-like_4 | AtRBP47c' | 1 | f | 17432518 | 17435064 | RRM 3 | |||||
| At | 636 | AT5G19350.1 | hnRNP-like_3 | atRBP45d | 5 | f | 6518838 | 6521474 | RRM 3 | |||||
| At | 870 | AT1G49600.1 | hnRNP-like_4 | AtRBP47a | 1 | r | 18356886 | 18360150 | RRM 3 | |||||
| At | 870 | AT3G19130.1 | hnRNP-like_4 | AtRBP47b | 3 | r | 6611198 | 6614044 | RRM 3 | |||||
| At | 2283 | AT2G19380.1 | hnRNP-like_2 | UBA1c | 2 | f | 8383856 | 8386604 | ||||||
| At | 2283 | AT2G22090.1 | hnRNP-like_2 | UBA1a | 2 | r | 9388260 | 9390507 | ||||||
| At | 2283 | AT2G22100.1 | hnRNP-like_2 | UBA1b | 2 | r | 9392210 | 9393562 | ||||||
| Gm | 107 | Glyma03g26100.1 | hnRNP-like_5 | gmAth1 | 3 | r | 33443090 | 33447644 | HANP4_PAI-RBP! 1 | |||||
| Gm | 107 | Glyma07g13900.1 | hnRNP-like_5 | gmAth2 | 7 | r | 13112789 | 13117099 | HANP4_PAI-RBP! 1 | |||||
| Gm | 107 | Glyma09g37850.1 | hnRNP-like_5 | gmAth3 | 9 | f | 43382187 | 43386538 | HANP4_PAI-RBP! 1 | |||||
| Gm | 107 | Glyma18g48620.1 | hnRNP-like_5 | gmAth4 | 18 | r | 58024935 | 58028636 | HANP4_PAI-RBP! 1 | |||||
| Gm | 137 | Glyma07g04640.1 | hnRNP-like_1 | gmUBP1b-1 | 7 | f | 3441530 | 3448137 | RRM 3 | |||||
| Gm | 137 | Glyma13g17200.1 | hnRNP-like_1 | gmUBP1b-2 | 13 | f | 20992369 | 20996651 | RRM 3 | |||||
| Gm | 137 | Glyma13g17200.2 | hnRNP-like_1 | gmUBP1b-2 | 13 | f | 20992369 | 20996651 | RRM 3 | |||||
| Gm | 137 | Glyma13g17200.3 | hnRNP-like_1 | gmUBP1b-2 | 13 | f | 20992411 | 20996651 | RRM 3 | |||||
| Gm | 137 | Glyma16g01230.1 | hnRNP-like_1 | gmUBP1b-3 | 16 | f | 902508 | 908825 | RRM 3 | |||||
| Gm | 137 | Glyma17g05530.1 | hnRNP-like_1 | gmUBP1b-4 | 17 | r | 3874914 | 3880261 | RRM 3 | |||||
| Gm | 137 | Glyma17g05530.2 | hnRNP-like_1 | gmUBP1b-4 | 17 | r | 3874914 | 3880261 | RRM 3 | |||||
| Gm | 137 | Glyma17g05530.3 | hnRNP-like_1 | gmUBP1b-4 | 17 | r | 3874914 | 3880261 | RRM 3 | |||||
| Gm | 137 | Glyma17g05530.4 | hnRNP-like_1 | gmUBP1b-4 | 17 | r | 3874914 | 3880280 | RRM 3 | |||||
| Gm | 137 | Glyma17g05530.5 | hnRNP-like_1 | gmUBP1b-4 | 17 | r | 3874914 | 3880280 | RRM 3 | |||||
| Gm | 146 | Glyma07g38940.1 | hnRNP-like_3 | gmRBP45a-1 | 7 | f | 43561137 | 43565088 | RRM 3 | |||||
| Gm | 146 | Glyma13g27570.1 | hnRNP-like_3 | gmRBP45a-2 | 13 | r | 30770991 | 30775322 | RRM 3 | |||||
| Gm | 146 | Glyma13g27570.2 | hnRNP-like_3 | gmRBP45a-2 | 13 | r | 30770991 | 30775322 | RRM 3 | |||||
| Gm | 146 | Glyma15g11380.1 | hnRNP-like_3 | gmRBP45a-3 | 15 | f | 8333371 | 8337675 | RRM 3 | |||||
| Gm | 146 | Glyma17g01800.1 | hnRNP-like_3 | gmRBP45a-4 | 17 | r | 1110282 | 1114428 | RRM 3 | |||||
| Gm | 410 | Glyma04g03950.1 | hnRNP-like_4 | gmRBP47c-1 | 4 | r | 2891846 | 2897791 | RRM 3 | |||||
| Gm | 410 | Glyma14g08840.1 | hnRNP-like_4 | gmRBP47c-2 | 14 | r | 6865562 | 6869755 | RRM 3 | |||||
| Gm | 410 | Glyma17g36330.1 | hnRNP-like_4 | gmRBP47c-3 | 17 | f | 40293213 | 40296765 | RRM 3 | |||||
| Gm | 636 | Glyma13g41500.1 | hnRNP-like_3 | gmRBP45d | 13 | r | 41780749 | 41783465 | RRM 3 | |||||
| Gm | 636 | Glyma13g41500.2 | hnRNP-like_3 | gmRBP45d | 13 | r | 41780749 | 41783465 | RRM 3 | |||||
| Gm | 870 | Glyma02g15190.1 | hnRNP-like_4 | gmRBP47a-1 | 2 | f | 13698852 | 13703488 | RRM 3 | |||||
| Gm | 870 | Glyma07g33300.1 | hnRNP-like_4 | gmRBP47a-2 | 7 | r | 38216920 | 38221558 | RRM 3 | |||||
| Lj | 107 | chr1.LjT29L18.90.nd | hnRNP-like_5 | ljAth | 1 | r | 40607318 | 40611152 | HANP4_PAI-RBP! 1 | |||||
| Lj | 146 | chr4.CM1334.150.nc | hnRNP-like_3 | ljRBP45a-1 | 4 | r | 3486058 | 3489985 | RRM 3 | |||||
| Lj | 146 | chr6.CM0139.780.nd | hnRNP-like_3 | ljRBP45a-2 | 6 | r | 55452312 | 55455442 | RRM 3 | |||||
| Lj | 410 | chr5.CM0089.1140.nc | hnRNP-like_4 | ljRBP47c | 5 | r | 678887 | 683017 | RRM 3 | |||||
| Lj | 870 | chr4.CM0079.170.nc | hnRNP-like_4 | ljRBP47a | 4 | r | 11873795 | 11877809 | RRM 3 | |||||
| Mt | 137 | IMGA|AC144483_30.2 | hnRNP-like_1 | mtUBP1b | 8 | r | 31235784 | 31240580 | RRM 3 | |||||
| Mt | 146 | IMGA|AC152402_23.2 | hnRNP-like_3 | mtRBP45a-1 | 8 | f | 34279564 | 34283829 | RRM 3 | |||||
| Mt | 146 | IMGA|AC202500_12.1 | hnRNP-like_3 | mtRBP45a-2 | 8 | r | 34393689 | 34397955 | RRM 3 | |||||
| Mt | 410 | IMGA|CU457783_12.1 | hnRNP-like_4 | mtRBP47c | 3 | r | 29349911 | 29353518 | RRM 3 | |||||
| Mt | 636 | IMGA|AC146330_10.2 | hnRNP-like_3 | mtRBP45d | 2 | r | 23519252 | 23524883 | RRM 3 | |||||
| Mt | 870 | IMGA|AC127168_20.2 | hnRNP-like_4 | mtRBP47a-1 | 4 | r | 28619047 | 28623498 | RRM 3 | |||||
| Mt | 870 | IMGA|AC151621_30.2 | hnRNP-like_4 | mtRBP47a-2 | RRM 3 | |||||||||
| Os | 107 | LOC_Os01g52390.1 | hnRNP-like_5 | osAth1 | 1 | r | 30094375 | 30097752 | HANP4_PAI-RBP! 1 | |||||
| Os | 107 | LOC_Os05g51180.1 | hnRNP-like_5 | osAth2 | 5 | f | 29293328 | 29296564 | HANP4_PAI-RBP! 1 | |||||
| Os | 137 | LOC_Os07g42380.1 | hnRNP-like_1 | osUBP1b-1 | 7 | f | 25356847 | 25361773 | RRM 3 | |||||
| Os | 137 | LOC_Os11g40510.1 | hnRNP-like_1 | osUBP1b-2 | 11 | r | 23704511 | 23709491 | RRM 3 | |||||
| Os | 137 | LOC_Os11g40510.2 | hnRNP-like_1 | osUBP1b-3 | 11 | r | 23704511 | 23709491 | RRM 3 | |||||
| Os | 146 | LOC_Os03g37270.1 | hnRNP-like_3 | osRBP45a-1 | 8 | r | 34393689 | 34397955 | RRM 3 | |||||
| Os | 146 | LOC_Os03g37270.2 | hnRNP-like_3 | osRBP45a-1 | 3 | r | 20653453 | 20659682 | RRM 3 | |||||
| Os | 146 | LOC_Os08g09100.1 | hnRNP-like_3 | osRBP45a-2 | 8 | r | 5267013 | 5272174 | RRM 3 | |||||
| Os | 410 | LOC_Os09g28810.1 | hnRNP-like_4 | osRBP47c | 9 | f | 17498162 | 17502055 | RRM 3 | |||||
| Os | 636 | LOC_Os03g07800.1 | hnRNP-like_3 | osRBP45d | 3 | f | 3969212 | 3973528 | RRM 3 | |||||
| Pp | 107 | estExt_fgenesh1_kg.C_4560001 | hnRNP-like_5 | ppAth1 | 456 | r | 162674 | 164791 | HANP4_PAI-RBP! 1 | |||||
| Pp | 107 | estExt_fgenesh1_pg.C_450162 | hnRNP-like_5 | ppAth2 | 45 | r | 2134602 | 2137105 | HANP4_PAI-RBP! 1 | |||||
| Pp | 107 | estExt_fgenesh2_pg.C_970090 | hnRNP-like_5 | ppAth3 | 97 | f | 1191621 | 1193767 | HANP4_PAI-RBP! 1 | |||||
| Pp | 107 | fgenesh1_pm.scaffold_22000005 | hnRNP-like_5 | ppAth4 | 22 | f | 116531 | 118998 | HANP4_PAI-RBP! 1 | |||||
| Pp | 636 | estExt_Genewise1.C_3910068 | hnRNP-like_3 | ppRBP45d-1 | 391 | f | 323784 | 328551 | RRM 3 | |||||
| Pp | 636 | gw1.219.6.1 | hnRNP-like_3 | ppRBP45d-2 | 219 | f | 754638 | 759678 | RRM 3 | |||||
| Pp | 636 | gw1.339.2.1 | hnRNP-like_3 | ppRBP45d-3 | 339 | r | 44492 | 49529 | RRM 3 | |||||
| Pt | 107 | jgi|Poptr1_1|286517|gw1.40.277.1 | hnRNP-like_5 | ptAth1 | 40 | r | 800736 | 802807 | HANP4_PAI-RBP! 1 | |||||
| Pt | 107 | jgi|Poptr1_1|830328|estExt_fgenesh4_pm.C_LG_II0615 | hnRNP-like_5 | ptAth2 | 2 | f | 10322201 | 10325012 | HANP4_PAI-RBP! 1 | |||||
| Pt | 107 | jgi|Poptr1_1|830730|estExt_fgenesh4_pm.C_LG_III0192 | hnRNP-like_5 | ptAth3 | 3 | f | 7619015 | 7622554 | HANP4_PAI-RBP! 1 | |||||
| Pt | 107 | jgi|Poptr1_1|836308|estExt_fgenesh4_pm.C_290040 | hnRNP-like_5 | ptAth4 | 29 | f | 979191 | 982581 | HANP4_PAI-RBP! 1 | |||||
| Pt | 137 | jgi|Poptr1_1|281598|gw1.28.172.1 | hnRNP-like_1 | ptUBP1b-1 | 28 | f | 583635 | 588022 | RRM 3 | |||||
| Pt | 137 | jgi|Poptr1_1|645804|grail3.0037000401 | hnRNP-like_1 | ptUBP1b-2 | 3 | r | 3376236 | 3381068 | RRM 3 | |||||
| Pt | 137 | jgi|Poptr1_1|673211|grail3.0158002202 | hnRNP-like_1 | ptUBP1b-3 | 158 | f | 246951 | 251811 | RRM 3 | |||||
| Pt | 146 | jgi|Poptr1_1|663393|grail3.0055015001 | hnRNP-like_3 | ptRBP45a-1 | 13 | f | 8146613 | 8151027 | RRM 3 | |||||
| Pt | 146 | jgi|Poptr1_1|713522|estExt_Genewise1_v1.C_LG_IV1715 | hnRNP-like_3 | ptRBP45a-2 | 4 | r | 485791 | 490307 | RRM 3 | |||||
| Pt | 146 | jgi|Poptr1_1|727110|estExt_Genewise1_v1.C_LG_XI0522 | hnRNP-like_3 | ptRBP45a-3 | 11 | f | 13382004 | 13386943 | RRM 3 | |||||
| Pt | 410 | jgi|Poptr1_1|286862|gw1.40.622.1 | hnRNP-like_4 | ptRBP47c-1 | 40 | r | 1790126 | 1793346 | RRM 3 | |||||
| Pt | 410 | jgi|Poptr1_1|798901|fgenesh4_pm.C_LG_II000590 | hnRNP-like_4 | ptRBP47c-2 | 2 | r | 9632326 | 9634926 | RRM 3 | |||||
| Pt | 636 | jgi|Poptr1_1|203044|gw1.IX.3509.1 | hnRNP-like_3 | ptRBP45d | 9 | f | 7094929 | 7097093 | RRM 3 | |||||
| Pt | 870 | jgi|Poptr1_1|744254|estExt_Genewise1_v1.C_1300118 | hnRNP-like_4 | ptRBP47a-1 | 130 | r | 432560 | 436975 | RRM 3 | |||||
| Pt | 870 | jgi|Poptr1_1|767539|fgenesh4_pg.C_LG_IX000590 | hnRNP-like_4 | ptRBP47a-2 | 9 | r | 3728527 | 3732800 | RRM 3 | |||||
| Sb | 107 | Sb03g033140.1 | hnRNP-like_5 | sbAth1 | 3 | r | 61526953 | 61529811 | HANP4_PAI-RBP! 1 | |||||
| Sb | 107 | Sb03g027110.1 | hnRNP-like_5 | sbAth2 | 3 | r | 54391074 | 54395753 | HANP4_PAI-RBP! 1 | |||||
| Sb | 107 | Sb09g030400.1 | hnRNP-like_5 | sbAth3 | 9 | f | 58927051 | 58929810 | HANP4_PAI-RBP! 1 | |||||
| Sb | 137 | Sb05g024850.1 | hnRNP-like_1 | sbUBP1b | 5 | r | 58019020 | 58026129 | RRM 3 | |||||
| Sb | 146 | Sb01g016170.1 | hnRNP-like_3 | sbRBP45a | 1 | f | 15945001 | 15950690 | RRM 3 | |||||
| Sb | 410 | Sb02g026820.1 | hnRNP-like_4 | sbRBP47c | 2 | f | 62037341 | 62041307 | RRM 3 | |||||
| Sb | 636 | Sb01g045570.1 | hnRNP-like_3 | sbRBP45d | 1 | r | 68649376 | 68653707 | RRM 3 | |||||
| Vv | 107 | GSVIVT00004557001 | hnRNP-like_5 | vvAth1 | 0 | f | 103109682 | 103115801 | HANP4_PAI-RBP! 1 | |||||
| Vv | 107 | GSVIVT00011423001 | hnRNP-like_5 | vvAth2 | 0 | r | 70751845 | 70757824 | HANP4_PAI-RBP! 1 | |||||
| Vv | 137 | GSVIVT00016402001 | hnRNP-like_1 | vvUBP1b-1 | 11 | r | 645002 | 652423 | RRM 3 | |||||
| Vv | 137 | GSVIVT00034047001 | hnRNP-like_1 | vvUBP1b-2 | 9 | r | 617388 | 623844 | RRM 3 | |||||
| Vv | 146 | GSVIVT00027337001 | hnRNP-like_3 | vvRBP45a | 19 | f | 6358453 | 6367245 | RRM 3 | |||||
| Vv | 410 | GSVIVT00014763001 | hnRNP-like_4 | vvRBP47c | 18 | f | 9294005 | 9299925 | RRM 3 | |||||
| Vv | 636 | GSVIVT00024620001 | hnRNP-like_3 | vvRBP45d | 6 | f | 2463669 | 2474818 | RRM 3 | |||||
| Vv | 870 | GSVIVT00036552001 | hnRNP-like_4 | vvRBP47 | 3 | r | 5105299 | 5110465 | RRM 3 | |||||
| Zm | 107 | GRMZM2G055276_T01 | hnRNP-like_5 | zmAth1 | 3 | f | 200643557 | 200646807 | HANP4_PAI-RBP! 1 | |||||
| Zm | 107 | GRMZM2G116282_T02 | hnRNP-like_5 | zmAth2 | 3 | r | 200468027 | 200471513 | HANP4_PAI-RBP! 1 | |||||
| Zm | 107 | GRMZM2G464401_T01 | hnRNP-like_5 | zmAth3 | 8 | f | 76258875 | 76262250 | HANP4_PAI-RBP! 1 | |||||
| Zm | 137 | GRMZM2G090908_T01 | hnRNP-like_1 | zmUBP1b | 4 | f | 5234570 | 5241151 | RRM 3 | |||||
| Zm | 137 | GRMZM2G090908_T02 | hnRNP-like_1 | zmUBP1b | 4 | f | 5234570 | 5241151 | RRM 3 | |||||
| Zm | 146 | GRMZM2G002874_T01 | hnRNP-like_3 | zmRBP45a-1 | 5 | f | 20661741 | 20664358 | RRM 3 | |||||
| Zm | 146 | GRMZM2G426591_T01 | hnRNP-like_3 | zmRBP45a-2 | 4 | f | 28187224 | 28194149 | RRM 3 | |||||
| Zm | 146 | GRMZM2G426591_T03 | hnRNP-like_3 | zmRBP45a-2 | 4 | f | 28187231 | 28193913 | RRM 3 | |||||
| Zm | 146 | GRMZM2G426591_T04 | hnRNP-like_3 | zmRBP45a-2 | 4 | f | 28187242 | 28193066 | RRM 3 | |||||
| Zm | 410 | GRMZM2G168163_T01 | hnRNP-like_4 | zmRBP47c-1 | 2 | f | 183982408 | 183987262 | RRM 3 | |||||
| Zm | 410 | GRMZM2G168163_T02 | hnRNP-like_4 | zmRBP47c-1 | 2 | f | 183982468 | 183987232 | RRM 3 | |||||
| Zm | 410 | GRMZM2G467907_T01 | hnRNP-like_4 | zmRBP47c-2 | 7 | f | 121396030 | 121401077 | RRM 3 | |||||
| Zm | 636 | GRMZM2G142557_T01 | hnRNP-like_3 | zmRBP45d | 1 | f | 15677704 | 15686511 | RRM 3 |