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Researchers involved in plant genomics research have diverse interests: some are interested in learning about plant genomics efforts that are going on in other locales while others are more interested in acquiring protocols, ideas, or research outlines used by other groups. Listed below are various resources that will help you to find plant genomics information online as well as links to materials you can use as instructional resources for workers at various levels including undergraduates, technicians, coworkers, and administrators.
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  96 Resource(s) Found 1 - 10     Next    
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1.  Apple EST Project
Program: Apple Functional Genomics
Institution: University of Illinois, Urbana-Champaign
Description: The apple, Malus x domestica Borkh., is the most important deciduous tree fruit crop grown in the United States. This project will focus on developing genomic research tools and genome expression studies addressing flowering, fruiting, biotic and abiotic stress responses on a genome-wide scale. [ Map this location ]
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2.  Plant Root Genomics Consortium
Program: Plant Root Genomics Consortium
Institution: University of Missouri, Columbia
Description: The aim of this consortium is to develop an understanding of the molecular mechanisms used by plant roots to acquire water and minerals from the soil, to elucidate the role roots play in adaptation to drought conditions, and to transfer this knowledge to crop improvement through biotechnology. [ Map this location ]
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3.  Oryza sativa (rice) genome view
Program: NCBI Map Viewer
Institution: NCBI (National Center for Biotechnology Information)
Description: The Map Viewer supports search and display of Oryza sativa genomic information by chromosomal position. The data are from five sources, the Rice Genome Project, RiceGenes, Gramene, Oryzabase and the ACWW Consortium. [ Map this location ]
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4.  Acorus americanus
Program: The Floral Genome Project
Institution: Penn State University
Description: Acorus americanus webpage within the Floral Genome Project website. Descriptive information, photo, reason for sampling, FGP libraries and EST sequencing, bibliography and links. [ Map this location ]
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5.  BarleyBase
Program: USDA - United States Department of Agriculture
Institution: Iowa State University
Description: BarleyBase is a USDA-funded public repository for plant microarray data. Currently, BarleyBase houses EXP, DAT, CEL and CHP files from the 22K Affymetrix Barley1 and Arabidopsis GeneChips, along with experiment information. Also included are probe sets for grape, rice, soybean, wheat, and maize. [ Map this location ]
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6.  Lycopersicon esculentum (tomato) genome view
Program: NCBI Map Viewer
Institution: NCBI (National Center for Biotechnology Information)
Description: The Map Viewer supports search and display of Lycopersicon esculentum genomic information by chromosomal position. There are four maps currently available. The gene genetic map is from the data presented by Tanksley et al.. [ Map this location ]
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7.  Gramene
Program: N/A
Institution: Cold Spring Harbor Laboratory
Description: Gramene is a curated, open-source, Web-accessible data resource for comparative genome analysis in the grasses. As an information resource, Gramene's purpose is to provide added value to data sets available within the public sector to facilitate researchers' ability to leverage the rice genomic sequence to identify and understand corresponding genes, pathways and phenotypes in the crop grasses. [ Map this location ]
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8.  PlantRBP/POGS Database
Program: Plant RNA Binding Proteins: Tools for Functional Genomics and Application to Chloroplast Biogenesis
Institution: University of Oregon
Description: PlantRBP/POGS is a relational database that integrates data from rice, maize, and Arabidopsis by placing the complete Arabidopsis and rice proteomes, and the available maize sequences into "putative orthologous groups" (POGS). POGS are annotated with domain organization, the results of four protein targeting predictors, and trees illustrating the relationship between POG members and the most closely related proteins in Arabidopsis and rice. The trees contain links that allow users to access related POGs. A graphical display maps maize sequences on to their most similar rice gene model. The database can be queried using any combination of gene name, accession, domain name, and predicted intracellular location, or by using BLAST. The concurrent display of mutual best hits and phylogenetic trees facilitates evaluation of POG assignments, and the display of targeting predictions and domain organization for all POG members reveals consistency (or lack thereof) of those predictions. Detailed annotation efforts are now beginning and will focus on predicted RNA binding proteins. [ Map this location ]
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9.  Brassica Genome Gateway
Program: N/A
Institution: BBSRC - the Biotechnology and Biological Sciences Research Council
Description: The purpose of this gatway is to be responsive to the Brassica and Arabidopsis user communities, publishing data in real time, soliciting nominations for the anchor probes and supplying BAC clones on request [ Map this location ]
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10.  Center for Medicago Genomics Research
Program: N/A
Institution: The Noble Foundation
Description: Center for Medicago Genomics Research takes a global approach in studying the genetic and biochemical events associated with the growth, development, and environmental interactions of the model legume M. truncatula. The Center's approach includes: large-scale EST and genome sequencing, gene expression profiling, the generation of M. truncatula activation-tagged, promoter trap insertion, and gene knockout systems and high-throughput metabolite and protein profiling. [ Map this location ]
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