The table below organizes the LjGDB annotation results - you can browse the latest results (Date column), look at particular BACs (GI column),
or search for specific putative Arabidopsis homologs by ID or description.For quick table tips, hover over any underlined link.
| 148762762 |
LjT08I01 |
AT5G17230.1 |
33663 |
36999 |
| Symbol: None | phytoene synthase (PSY) / geranylgeranyl-diphosphate geranylgeranyl transferase, identical to GB:L25812; synonymous with geranylgeranyl-diphosphate geranylgeranyl transferase | chr5:5659576-5662867 REVERSE | Aliases: MKP11.25, MKP11_25 |
2007-07-20 |
| 148762761 |
LjT38B12 |
AT1G48410.1 |
63429 |
69005 |
| Symbol: None | argonaute protein (AGO1), identical to SP:O04379 Argonaute protein (AGO1) {Arabidopsis thaliana}; contains Pfam profiles PF02171: Piwi domain, PF02170: PAZ domain | chr1:17889766-17896236 REVERSE | Aliases: T1N15.2, T1N15_2 |
2007-07-20 |
| 148762760 |
LjB09G07 |
AT3G43190.1 |
27395 |
31370 |
| Symbol: None | sucrose synthase, putative / sucrose-UDP glucosyltransferase, putative, strong similarity to SP:P49040 Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP glucosyltransferase) {Arabidopsis thaliana} (SUS1) | chr3:15190055-15194977 REVERSE | Aliases: F7K15.40 |
2007-07-20 |
| 148762760 |
LjB09G07 |
AT5G20830.1 |
27413 |
31370 |
| Symbol: None | sucrose synthase / sucrose-UDP glucosyltransferase (SUS1), identical to SP:P49040 Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP glucosyltransferase) {Arabidopsis thaliana} | chr5:7050228-7054121 REVERSE | Aliases: T1M15.230, T1M15_230 |
2007-07-20 |
| 148762759 |
LjT30M08 |
AT3G05590.1 |
14540 |
15942 |
| Symbol: None | 60S ribosomal protein L18 (RPL18B), similar to GB:P42791 | chr3:1621486-1623020 FORWARD | Aliases: F18C1.14, F18C1_14 |
2007-07-20 |
| 148762759 |
LjT30M08 |
AT5G27850.1 |
14540 |
15942 |
| Symbol: None | 60S ribosomal protein L18 (RPL18C), 60S ribosomal protein L18, Arabidopsis thaliana, SWISSPROT:RL18_ARATH | chr5:9873160-9874602 FORWARD | Aliases: F14I23.10, F14I23_10 |
2007-07-20 |
| 148762759 |
LjT30M08 |
AT4G02290.1 |
68341 |
70580 |
| Symbol: None | glycosyl hydrolase family 9 protein, similar to endo-1,4-beta glucanase; ATCEL2 GI:3132891 from (Arabidopsis thaliana) | chr4:1002446-1005202 REVERSE | Aliases: T2H3.5, T2H3_5 |
2007-07-20 |
| 148762759 |
LjT30M08 |
AT5G49190.1 |
77874 |
83154 |
| Symbol: None | sucrose synthase / sucrose-UDP glucosyltransferase (SUS2), nearly identical to SP:Q00917 Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP glucosyltransferase) {Arabidopsis thaliana} (SUS2); contains Pfam profile: PF00862 sucrose synthase | chr5:19960508-19964415 REVERSE | Aliases: K21P3.6, K21P3_6 |
2007-07-20 |
| 148762759 |
LjT30M08 |
AT4G02280.1 |
78048 |
83664 |
| Symbol: None | sucrose synthase, putative / sucrose-UDP glucosyltransferase, putative, strong similarity to sucrose synthase GI:6682841 from (Citrus unshiu) | chr4:994927-998963 FORWARD | Aliases: T2H3.8, T2H3_8 |
2007-07-20 |
| 148762758 |
LjT36C12 |
AT4G02280.1 |
50567 |
56028 |
| Symbol: None | sucrose synthase, putative / sucrose-UDP glucosyltransferase, putative, strong similarity to sucrose synthase GI:6682841 from (Citrus unshiu) | chr4:994927-998963 FORWARD | Aliases: T2H3.8, T2H3_8 |
2007-07-20 |
| 148762758 |
LjT36C12 |
AT5G49190.1 |
51743 |
56211 |
| Symbol: None | sucrose synthase / sucrose-UDP glucosyltransferase (SUS2), nearly identical to SP:Q00917 Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP glucosyltransferase) {Arabidopsis thaliana} (SUS2); contains Pfam profile: PF00862 sucrose synthase | chr5:19960508-19964415 REVERSE | Aliases: K21P3.6, K21P3_6 |
2007-07-20 |
| 148762758 |
LjT36C12 |
AT3G16780.1 |
89990 |
91503 |
| Symbol: None | 60S ribosomal protein L19 (RPL19B), similar to ribosomal protein L19 GB:CAA45090 from (Homo sapiens) | chr3:5708931-5710415 FORWARD | Aliases: MGL6.7 |
2007-07-20 |
| 148762758 |
LjT36C12 |
AT1G02780.1 |
90045 |
91710 |
| Symbol: EMB2386 | 60S ribosomal protein L19 (RPL19A), similar to ribosomal protein L19 GI:36127 from (Homo sapiens) | chr1:607821-609435 REVERSE | Aliases: T14P4.34, EMB2386, EMBRYO DEFECTIVE 2386 |
2007-07-20 |
| 148762758 |
LjT36C12 |
AT4G02230.1 |
90072 |
91710 |
| Symbol: None | 60S ribosomal protein L19 (RPL19C), similar to L19 from several species | chr4:979229-980667 REVERSE | Aliases: T2H3.3, T2H3_3 |
2007-07-20 |
| 124300858 |
LjT40A22 |
AT2G45710.1 |
42390 |
42646 |
| Symbol: None | 40S ribosomal protein S27 (RPS27A) | chr2:18838235-18839281 FORWARD | Aliases: F4I18.31 |
2007-07-20 |
| 124300858 |
LjT40A22 |
AT3G61110.1 |
42390 |
42655 |
| Symbol: None | 40S ribosomal protein S27 (ARS27A), identical to cDNA ribosomal protein S27 (ARS27A) GI:4193381 | chr3:22622621-22623785 FORWARD | Aliases: T27I15.200 |
2007-07-20 |
| 124300858 |
LjT40A22 |
AT5G47930.1 |
42390 |
42646 |
| Symbol: None | 40S ribosomal protein S27 (RPS27D) | chr5:19423403-19424624 REVERSE | Aliases: K16F13.2, K16F13_2 |
2007-07-20 |
| 124300856 |
LjT14A18 |
AT5G48470.1 |
75028 |
79568 |
| Symbol: None | expressed protein | chr5:19658987-19661588 FORWARD | Aliases: MJE7.11, MJE7_11 |
2007-07-20 |
| 84453088 |
LjT43B09 |
AT2G24360.1 |
20452 |
23901 |
| Symbol: None | serine/threonine/tyrosine kinase, putative, similar to serine/threonine/tyrosine kinase (Arachis hypogaea) gi:13124865:gb:AAK11734 | chr2:10371531-10373971 REVERSE | Aliases: T28I24.9, T28I24_9 |
2007-07-20 |
| 84453088 |
LjT43B09 |
AT4G31170.1 |
20452 |
23901 |
| Symbol: None | protein kinase family protein, contains eukaryotic protein kinase domain, INTERPRO:IPR000719 | chr4:15153188-15155659 REVERSE | Aliases: F6E21.90, F6E21_90 |
2007-07-20 |
| 84453088 |
LjT43B09 |
AT2G07050.1 |
69520 |
77046 |
| Symbol: None | cycloartenol synthase (CAS1) / 2,3-epoxysqualene--cycloartenol cyclase / (S)-2,3-epoxysqualene mutase, identical to cycloartenol synthase (SP:P38605 : GI:452446) (PMID:7505443) | chr2:2924444-2930669 FORWARD | Aliases: T4E14.16, T4E14_16 |
2007-07-20 |
| 84453086 |
LjT03N08 |
AT5G20620.1 |
73089 |
74304 |
| Symbol: None | polyubiquitin (UBQ4), identical to GI:17677 | chr5:6973073-6974945 REVERSE | Aliases: T1M15.20, T1M15_20 |
2007-07-20 |
| 84453086 |
LjT03N08 |
AT5G37640.1 |
73381 |
74353 |
| Symbol: None | polyubiquitin (UBQ9), identical to polyubiquitin (ubq9) gene sequence GI:304120 from (Arabidopsis thaliana) | chr5:14970012-14970980 REVERSE | Aliases: K12B20.90, K12B20_90 |
2007-07-20 |
| 84453086 |
LjT03N08 |
AT1G31340.1 |
73387 |
73858 |
| Symbol: None | ubiquitin family protein, contains INTERPRO:IPR000626 ubiquitin domain | chr1:11217865-11219437 REVERSE | Aliases: T19E23.13, T19E23_13 |
2007-07-20 |
| 84453086 |
LjT03N08 |
AT1G65350.1 |
73387 |
74428 |
| Symbol: None | polyubiquitin, putative, similar to polyubiquitin GI:248337 from (Zea mays) | chr1:24280054-24280938 REVERSE | Aliases: T8F5.13, T8F5_13 |
2007-07-20 |
| 84453086 |
LjT03N08 |
AT2G35635.1 |
73387 |
73858 |
| Symbol: None | ubiquitin family protein, contains INTERPRO:IPR000626 ubiquitin domain | chr2:14988073-14989195 FORWARD | Aliases: None |
2007-07-20 |
| 84453086 |
LjT03N08 |
AT5G03240.1 |
73387 |
74304 |
| Symbol: None | polyubiquitin (UBQ3), identical to GI:928809 | chr5:771751-773359 REVERSE | Aliases: F15A17.270, F15A17_270 |
2007-07-20 |
| 84453086 |
LjT03N08 |
AT4G05320.1 |
73387 |
74598 |
| Symbol: None | polyubiquitin (UBQ10) (SEN3), senescence-associated protein; identical to GI:870791 | chr4:2718168-2720130 FORWARD | Aliases: C17L7.240, C17L7_240 |
2007-07-20 |
| 84453086 |
LjT03N08 |
AT4G02890.1 |
73387 |
74304 |
| Symbol: None | polyubiquitin (UBQ14), identical to GI:166795; similar to N. sylvestris hexameric polyubiquitin, GenBank accession number M74101 | chr4:1278530-1280028 REVERSE | Aliases: T5J8.21, T5J8_21 |
2007-07-20 |
| 84453086 |
LjT03N08 |
AT1G55060.1 |
73615 |
74304 |
| Symbol: None | polyubiquitin (UBQ12), identical to polyubiquitin (ubq12) gene sequence GI:304121 from (Arabidopsis thaliana) | chr1:20553200-20553892 FORWARD | Aliases: T7N22.10 |
2007-07-20 |
| 84453086 |
LjT03N08 |
AT4G05050.1 |
73615 |
74304 |
| Symbol: None | polyubiquitin (UBQ11), identical to GI:304117 | chr4:2588002-2589360 REVERSE | Aliases: C17L7.6 |
2007-07-20 |
| 84453086 |
LjT03N08 |
AT3G52590.1 |
73615 |
74137 |
| Symbol: EMB2167 | ubiquitin extension protein 1 (UBQ1) / 60S ribosomal protein L40 (RPL40B), identical to GI:166929, GI:166930 | chr3:19516614-19517910 FORWARD | Aliases: F3C22.8, EMB2167, EMBRYO DEFECTIVE 2167 |
2007-07-20 |
| 84453086 |
LjT03N08 |
AT2G36170.1 |
74071 |
74598 |
| Symbol: None | ubiquitin extension protein 2 (UBQ2) / 60S ribosomal protein L40 (RPL40A), identical to GI:166930, GI:166931 | chr2:15179196-15180358 FORWARD | Aliases: F9C22.10, F9C22_10 |
2007-07-20 |
| 84453086 |
LjT03N08 |
AT1G78920.1 |
87757 |
95495 |
| Symbol: None | vacuolar-type H+-translocating inorganic pyrophosphatase (AVPL1), identical to vacuolar-type H+-translocating inorganic pyrophosphatase GI:6901676 from (Arabidopsis thaliana) | chr1:29676386-29681874 FORWARD | Aliases: F9K20.2, F9K20_2 |
2007-07-20 |
| 84453086 |
LjT03N08 |
AT1G16780.1 |
89254 |
95495 |
| Symbol: None | vacuolar-type H+-translocating inorganic pyrophosphatase, putative, similar to vacuolar-type H+-translocating inorganic pyrophosphatase GI:6901676 from (Arabidopsis thaliana) | chr1:5739292-5743562 REVERSE | Aliases: F17F16.2, F17F16_2 |
2007-07-20 |
| 84369983 |
LjT45D07 |
AT5G48300.1 |
2145 |
6103 |
| Symbol: None | glucose-1-phosphate adenylyltransferase small subunit 1 (APS1) / ADP-glucose pyrophosphorylase (ADG1), identical to SP:P55228 | chr5:19587472-19590030 FORWARD | Aliases: K23F3.2, K23F3_2 |
2007-07-20 |
| 84369983 |
LjT45D07 |
AT3G07760.1 |
66633 |
68271 |
| Symbol: None | expressed protein | chr3:2476455-2478219 FORWARD | Aliases: MLP3.21 |
2007-07-20 |
| 84369981 |
LjT44M23 |
AT3G07770.1 |
28423 |
32772 |
| Symbol: None | heat shock protein-related, strong similarity to heat-shock protein (Secale cereale) GI:556673; contains Pfam profiles PF02518: ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein, PF00183: Hsp90 protein | chr3:2479561-2484171 FORWARD | Aliases: MLP3.22 |
2007-07-20 |
| 84369980 |
LjT44M23 |
AT3G07760.1 |
20504 |
22142 |
| Symbol: None | expressed protein | chr3:2476455-2478219 FORWARD | Aliases: MLP3.21 |
2007-07-20 |
| 84369980 |
LjT44M23 |
AT2G05100.1 |
39753 |
40703 |
| Symbol: None | chlorophyll A-B binding protein / LHCII type II (LHCB2.1) (LHCB2.3), identical to Lhcb2 protein (Arabidopsis thaliana) GI:4741948, GI:4741944; contains Pfam profile PF00504: Chlorophyll A-B binding protein | chr2:1823237-1824389 REVERSE | Aliases: F15L11.2, F15L11_2 |
2007-07-20 |
| 84369980 |
LjT44M23 |
AT2G05070.1 |
39753 |
40703 |
| Symbol: None | chlorophyll A-B binding protein / LHCII type II (LHCB2.2), identical to Lhcb2 protein (Arabidopsis thaliana) GI:4741946; contains Pfam profile PF00504: Chlorophyll A-B binding protein | chr2:1799231-1800386 REVERSE | Aliases: F1O13.20, F1O13_20 |
2007-07-20 |
| 84369980 |
LjT44M23 |
AT3G27690.1 |
39753 |
40703 |
| Symbol: None | chlorophyll A-B binding protein (LHCB2:4), nearly identical to Lhcb2 protein (Arabidopsis thaliana) GI:4741950; similar to chlorophyll A-B binding protein 151 precursor (LHCP) GB:P27518 from (Gossypium hirsutum); contains Pfam PF00504: Chlorophyll A-B binding protein | chr3:10257184-10258248 FORWARD | Aliases: MGF10.10 |
2007-07-20 |
| 84369980 |
LjT44M23 |
AT2G34430.1 |
40053 |
40703 |
| Symbol: None | chlorophyll A-B binding protein / LHCII type I (LHB1B1), identical to photosystem II type I chlorophyll a/b binding protein (Arabidopsis thaliana) GI:16366 | chr2:14531835-14532842 FORWARD | Aliases: F13P17.29, T31E10.23, T31E10_23 |
2007-07-20 |
| 84369980 |
LjT44M23 |
AT1G29930.1 |
40053 |
40703 |
| Symbol: None | chlorophyll A-B binding protein 2, chloroplast / LHCII type I CAB-2 / CAB-140 (CAB2B), identical to SP:P04778 Chlorophyll A-B binding protein 2, chloroplast precursor (LHCII type I CAB-2) (CAB-140) (LHCP) {Arabidopsis thaliana} | chr1:10477989-10479032 FORWARD | Aliases: F1N18.3, F1N18_3 |
2007-07-20 |
| 84369980 |
LjT44M23 |
AT1G29910.1 |
40053 |
40703 |
| Symbol: None | chlorophyll A-B binding protein 2, chloroplast / LHCII type I CAB-2 / CAB-140 (CAB2A), identical to SP:P04778 Chlorophyll A-B binding protein 2, chloroplast precursor (LHCII type I CAB-2) (CAB-140) (LHCP) {Arabidopsis thaliana} | chr1:10472264-10473283 REVERSE | Aliases: F1N18.5 |
2007-07-20 |
| 84369980 |
LjT44M23 |
AT1G29920.1 |
40053 |
40703 |
| Symbol: None | chlorophyll A-B binding protein 165/180, chloroplast / LHCII type I CAB-165/180, identical to SP:P04777 Chlorophyll A-B binding protein 165/180, chloroplast precursor (LHCII type I CAB-165/180) (LHCP) {Arabidopsis thaliana}; similar to photosystem II type I chlorophyll a /b binding protein GI:16364 from (Arabidopsis thaliana) | chr1:10474768-10475943 REVERSE | Aliases: F1N18.4, F1N18_4 |
2007-07-20 |
| 84369980 |
LjT44M23 |
AT2G34420.1 |
40053 |
40703 |
| Symbol: None | chlorophyll A-B binding protein / LHCII type I (LHB1B2), identical to GB:X64460 photosystem II type I chlorophyll a/b binding protein (Arabidopsis thaliana) GI:16364 | chr2:14529294-14530647 REVERSE | Aliases: F13P17.32 |
2007-07-20 |
| 83017080 |
LjT43I02 |
AT1G55810.1 |
2899 |
7727 |
| Symbol: None | uracil phosphoribosyltransferase, putative / UMP pyrophosphorylase, putative / UPRTase, putative, similar to SP:O65583 Uracil phosphoribosyltransferase (EC 2.4.2.9) (UMP pyrophosphorylase) (UPRTase) {Arabidopsis thaliana}; contains Pfam profile PF00485: Phosphoribulokinase / Uridine kinase family | chr1:20864275-20867932 FORWARD | Aliases: F20N2.21, F20N2_21 |
2007-07-20 |
| 83017080 |
LjT43I02 |
AT4G26510.1 |
5140 |
7727 |
| Symbol: None | uracil phosphoribosyltransferase / UMP pyrophosphorylase (UPT1), nearly identical to SP:O65583 Uracil phosphoribosyltransferase (EC 2.4.2.9) (UMP pyrophosphorylase) (UPRTase) {Arabidopsis thaliana} | chr4:13384070-13388297 FORWARD | Aliases: M3E9.60, M3E9_60 |
2007-07-20 |
| 83017080 |
LjT43I02 |
AT2G36460.1 |
9479 |
12171 |
| Symbol: None | fructose-bisphosphate aldolase, putative, similar to PIR:S65073 fructose-bisphosphate aldolase (EC 4.1.2.13) isoenzyme C-1, cytosolic (Oryza sativa); contains Pfam profile PF00274 Fructose-bisphosphate aldolase class-I | chr2:15303780-15305593 REVERSE | Aliases: F1O11.9, F1O11_9 |
2007-07-20 |
| 83017080 |
LjT43I02 |
AT3G52930.1 |
9554 |
12171 |
| Symbol: None | fructose-bisphosphate aldolase, putative, similar to SP:O65735:ALF_CICAR Fructose-bisphosphate aldolase, cytoplasmic isozyme {Cicer arietinum}, cytosolic aldolase (Fragaria x ananassa) GI:10645188; contains Pfam profile PF00274 Fructose-bisphosphate aldolase class-I | chr3:19637726-19639920 REVERSE | Aliases: F8J2.100 |
2007-07-20 |
| 83017080 |
LjT43I02 |
AT4G26520.1 |
9554 |
12171 |
| Symbol: None | fructose-bisphosphate aldolase, cytoplasmic, identical to SP:P22197 Fructose-bisphosphate aldolase, cytoplasmic isozyme (EC 4.1.2.13) {Arabidopsis thaliana} | chr4:13388683-13390381 FORWARD | Aliases: M3E9.50, M3E9_50 |
2007-07-20 |
| 83017080 |
LjT43I02 |
AT4G26530.1 |
9554 |
12171 |
| Symbol: None | fructose-bisphosphate aldolase, putative, strong similarity to SP:P22197 Fructose-bisphosphate aldolase, cytoplasmic isozyme (EC 4.1.2.13) {Arabidopsis thaliana} | chr4:13391511-13393114 FORWARD | Aliases: M3E9.40, M3E9_40 |
2007-07-20 |
| 83017080 |
LjT43I02 |
AT2G07520.1 |
22215 |
22897 |
| Symbol: None | hypothetical protein | chr2:3135109-3135777 FORWARD | Aliases: F9A16.11, F9A16_11 |
2007-07-20 |
| 73808018 |
LjT07P16 |
AT1G13950.1 |
57067 |
59132 |
| Symbol: None | eukaryotic translation initiation factor 5A-1 / eIF-5A 1, identical to SP:Q9XI91 Eukaryotic translation initiation factor 5A-1 (eIF-5A 1) {Arabidopsis thaliana} | chr1:4773573-4774838 FORWARD | Aliases: F16A14.17 |
2007-07-20 |
| 73808018 |
LjT07P16 |
AT1G69410.1 |
57067 |
59132 |
| Symbol: None | eukaryotic translation initiation factor 5A, putative / eIF-5A, putative, strong similarity to eukaryotic initiation factor 5A (2) (Nicotiana plumbaginifolia) GI:19702, SP:Q9AXQ6: Eukaryotic translation initiation factor 5A-1 (eIF-5A 1) {Lycopersicon esculentum} | chr1:26092868-26094047 FORWARD | Aliases: F10D13.8, F10D13_8 |
2007-07-20 |
| 73808015 |
LjT39G20 |
AT1G62400.1 |
31945 |
34547 |
| Symbol: None | protein kinase, putative, similar to protein kinase gi:170047:gb:AAA34002; contains protein kinase domain, Pfam:PF00069 | chr1:23093908-23095254 FORWARD | Aliases: F24O1.13, F24O1_13 |
2007-07-20 |
| 73808015 |
LjT39G20 |
AT3G20290.1 |
35673 |
40456 |
| Symbol: None | calcium-binding EF hand family protein, similar to EH-domain containing protein 1 from {Mus musculus} SP:Q9WVK4 and {Homo sapiens} SP:Q9H4M9, receptor-mediated endocytosis 1 from (Caenorhabditis elegans) GI:13487775, GI:13487777, GI:13487779; contains INTERPRO:IPR002048 calcium-binding EF-hand domain | chr3:7074841-7078877 REVERSE | Aliases: MQC12.3 |
2007-07-20 |
| 68264922 |
LjT18H02 |
AT3G27540.1 |
8366 |
9541 |
| Symbol: None | glycosyl transferase family 17 protein, low similarity to beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase (EC 2.4.1.144) from Mus musculus (SP:Q10470), Rattus norvegicus (SP:Q02527), Homo sapiens (SP:Q09327) ; contains Pfam profile PF04724 :Glycosyltransferase family 17 | chr3:10206545-10208543 FORWARD | Aliases: MMJ24.9 |
2007-07-20 |
| 68264922 |
LjT18H02 |
AT1G67880.1 |
8380 |
9650 |
| Symbol: None | glycosyl transferase family 17 protein, low similarity to beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase (EC 2.4.1.144) from Mus musculus (SP:Q10470), Rattus norvegicus (SP:Q02527), Homo sapiens (SP:Q09327) ; contains Pfam profile PF04724 :Glycosyltransferase family 17 | chr1:25457584-25459398 REVERSE | Aliases: T23K23.27, T23K23_27 |
2007-07-20 |
| 68264920 |
LjT18I21 |
AT2G27600.1 |
54902 |
58977 |
| Symbol: None | AAA-type ATPase family protein / vacuolar sorting protein-related, similar to SP:P46467 SKD1 protein (Vacuolar sorting protein 4b) {Mus musculus}; contains Pfam profiles PF00004: ATPase AAA family, PF04212: MIT domain | chr2:11788115-11791008 FORWARD | Aliases: F10A12.27, F10A12_27 |
2007-07-20 |
| 68264919 |
LjT08G16 |
AT1G12430.1 |
23590 |
31803 |
| Symbol: None | armadillo/beta-catenin repeat family protein / kinesin motor family protein | chr1:4233871-4238757 REVERSE | Aliases: None |
2007-07-20 |
| 68264919 |
LjT08G16 |
AT1G12500.1 |
99896 |
100948 |
| Symbol: None | phosphate translocator-related, low similarity to glucose-6-phosphate/phosphate-translocator precursor (Zea mays) GI:2997589, phosphoenolpyruvate/phosphate translocator precursor (Mesembryanthemum crystallinum) GI:9295275, SP:P21727:CPTR_PEA Triose phosphate/phosphate translocator, chloroplast precursor (CTPT) {Pisum sativum} | chr1:4263148-4265028 REVERSE | Aliases: F5O11.25, F5O11_25 |
2007-07-20 |
| 56806512 |
LjT25I15 |
AT5G51700.1 |
42279 |
44416 |
| Symbol: None | RAR1 disease resistance protein (RAR1), Contains a 3 nt micro-exon at exon 2. | chr5:21018438-21020431 REVERSE | Aliases: MIO24.17, MIO24_17 |
2007-07-20 |
| 56806508 |
LjT09M14 |
AT2G07520.1 |
43571 |
44253 |
| Symbol: None | hypothetical protein | chr2:3135109-3135777 FORWARD | Aliases: F9A16.11, F9A16_11 |
2007-07-20 |
| 56806507 |
LjB140B09 |
AT4G28088.1 |
96787 |
97456 |
| Symbol: None | hydrophobic protein, putative / low temperature and salt responsive protein, putative, similar to Hydrophobic protein RCI2A (Low temperature and salt responsive protein LTI6A) GI:15214251 | chr4:13961250-13961566 REVERSE | Aliases: None |
2007-07-20 |
| 56806505 |
LjT42I05 |
AT4G27020.1 |
64056 |
68311 |
| Symbol: None | expressed protein, gene F20P5.12 of BAC F20P5 from Arabidopsis thalianachromosome 1, PID:g2194125 | chr4:13568439-13571480 REVERSE | Aliases: F10M23.360, F10M23_360 |
2007-07-20 |
| 56806504 |
LjT36O06 |
AT5G44480.1 |
45498 |
48609 |
| Symbol: None | NAD-dependent epimerase/dehydratase family protein, similar to SP:P55180 UDP-glucose 4-epimerase (EC 5.1.3.2) from Bacillus subtilis, GI:3021357 UDP-galactose 4-epimerase from Cyamopsis tetragonoloba; contains Pfam profile PF01370 NAD dependent epimerase/dehydratase family | chr5:17938742-17940870 FORWARD | Aliases: MFC16.15, MFC16_15 |
2007-07-20 |
| 56806504 |
LjT36O06 |
AT1G30620.1 |
45587 |
48606 |
| Symbol: None | UDP-D-xylose 4-epimerase, putative (MUR4), similar to SP:P55180 UDP-glucose 4-epimerase (EC 5.1.3.2) from Bacillus subtilis, GI:3021357 UDP-galactose 4-epimerase from Cyamopsis tetragonoloba; contains Pfam profile PF01370 NAD dependent epimerase/dehydratase family; contains TIGRfam profile TIGR01179: UDP-glucose 4-epimerase | chr1:10854572-10858226 FORWARD | Aliases: T5I8.7, T5I8_7 |
2007-07-20 |
| 56806504 |
LjT36O06 |
AT4G20460.1 |
45698 |
48600 |
| Symbol: None | NAD-dependent epimerase/dehydratase family protein, similar to UDP-galactose 4-epimerase from Cyamopsis tetragonoloba GI:3021357 (EMBL:AJ005082), Bacillus subtilis SP:P55180; contains Pfam profile PF01370 NAD dependent epimerase/dehydratase family | chr4:11029747-11031583 REVERSE | Aliases: F9F13.110, F9F13_110 |
2007-07-20 |
| 56806504 |
LjT36O06 |
AT2G34850.1 |
46882 |
48609 |
| Symbol: None | NAD-dependent epimerase/dehydratase family protein, similar to UDP-galactose 4-epimerase from Cyamopsis tetragonoloba GI:3021357, Lactococcus lactis GI:3703056; contains Pfam profile PF01370 NAD dependent epimerase/dehydratase family | chr2:14711711-14713262 REVERSE | Aliases: F19I3.8, F19I3_8 |
2007-07-20 |
| 56806504 |
LjT36O06 |
AT3G48750.1 |
102777 |
106043 |
| Symbol: CDKA;1 | A-type cyclin-dependent kinase. Together with its specific inhibitor, the Kip-related protein, KRP2 they regulate the mitosis-to-endocycle transition during leaf development. | chr3:18082533-18085626 FORWARD | Aliases: T21J18.20, CDKA;1, CYCLIN-DEPENDENT KINASE A;1 |
2007-07-20 |
| 56806503 |
LjB03L08 |
AT5G60020.1 |
56061 |
58715 |
| Symbol: None | laccase, putative / diphenol oxidase, putative, similar to laccase LAC2-4, Liriodendron tulipifera, EMBL:LTU73106 (GI:1621467) | chr5:24185222-24187688 FORWARD | Aliases: MMN10.20, MMN10_20 |
2007-07-20 |
| 56806501 |
LjT02E20 |
AT2G04520.1 |
67145 |
67582 |
| Symbol: None | eukaryotic translation initiation factor 1A, putative / eIF-1A, putative / eIF-4C, putative, strong similarity to translation initiation factor (eIF-1A) (Beta vulgaris) GI:17977975; contains Pfam profile PF01176: Eukaryotic initiation factor 1A | chr2:1574589-1575856 REVERSE | Aliases: T1O3.7, T1O3_7 |
2007-07-20 |
| 56806501 |
LjT02E20 |
AT5G35680.1 |
67145 |
67582 |
| Symbol: None | eukaryotic translation initiation factor 1A, putative / eIF-1A, putative / eIF-4C, putative, strong similarity to translation initiation factor (eIF-1A) (Beta vulgaris) GI:17977975; contains Pfam profile PF01176: Eukaryotic initiation factor 1A | chr5:13875151-13876240 REVERSE | Aliases: MXH1.2, MXH1_2 |
2007-07-20 |
| 56806499 |
LjT02E02 |
AT4G20440.1 |
72709 |
73548 |
| Symbol: SMB | small nuclear ribonucleoprotein associated protein B, putative / snRNP-B, putative / Sm protein B, putative, similar to SP:Q05856 Small nuclear ribonucleoprotein associated protein B (snRNP-B) (Sm protein B) (Sm-B) (SmB) {Drosophila melanogaster} | chr4:11022153-11023763 REVERSE | Aliases: F9F13.90, F9F13_90, SMB |
2007-07-20 |
| 56806495 |
LjT17N03 |
AT4G22720.1 |
44942 |
46561 |
| Symbol: None | glycoprotease M22 family protein, similar to sialylglycoprotease (Haemophilus ducreyi) GI:6942294; contains Pfam profile PF00814: Glycoprotease family | chr4:11937025-11938977 FORWARD | Aliases: T12H17.110, T12H17_110 |
2007-07-20 |
| 56806495 |
LjT17N03 |
AT4G01100.1 |
58001 |
61650 |
| Symbol: None | mitochondrial substrate carrier family protein, contains Pfam profile: PF00153 mitochondrial carrier protein | chr4:477155-479935 FORWARD | Aliases: F2N1.16, F2N1_16 |
2007-07-20 |
| 56806495 |
LjT17N03 |
AT5G41760.1 |
66473 |
69609 |
| Symbol: None | nucleotide-sugar transporter family protein, low similarity to SP:Q61420 CMP-sialic acid transporter {Mus musculus}; contains Pfam profile PF04142: Nucleotide-sugar transporter | chr5:16724156-16726712 FORWARD | Aliases: K16L22.3, K16L22_3 |
2007-07-20 |
| 56806495 |
LjT17N03 |
AT3G61600.1 |
84801 |
89225 |
| Symbol: None | BTB/POZ domain-containing protein, contains Pfam PF00651: BTB/POZ domain; contains Interpro IPR000210/ PS50097: BTBB/POZ domain; similar to POZ/BTB containing-protein AtPOB1 (GI:12006855) (Arabidopsis thaliana); similar to actinfilin (GI:21667852) (Rattus norvegicus) | chr3:22806554-22809295 FORWARD | Aliases: F15G16.4 |
2007-07-20 |
| 56806495 |
LjT17N03 |
AT2G46260.1 |
84993 |
89219 |
| Symbol: None | BTB/POZ domain-containing protein, contains Pfam PF00651: BTB/POZ domain; contains Interpro IPR000210/ PS50097: BTBB/POZ domain; similar to POZ/BTB containing-protein AtPOB1 (GI:12006855) (Arabidopsis thaliana); similar to actinfilin (GI:21667852) (Rattus norvegicus) | chr2:19003041-19005706 FORWARD | Aliases: T3F17.9 |
2007-07-20 |
| 56806493 |
LjB22E06 |
AT1G04480.1 |
62066 |
63246 |
| Symbol: None | 60S ribosomal protein L23 (RPL23A), identical to GB:AAB80655 | chr1:1216094-1217457 FORWARD | Aliases: F19P19.5, F19P19_5 |
2007-07-20 |
| 56806493 |
LjB22E06 |
AT2G33370.1 |
62066 |
63246 |
| Symbol: None | 60S ribosomal protein L23 (RPL23B) | chr2:14150646-14151797 REVERSE | Aliases: F4P9.14 |
2007-07-20 |
| 56806493 |
LjB22E06 |
AT3G04400.1 |
62066 |
63246 |
| Symbol: EMB2171 | 60S ribosomal protein L23 (RPL23C), similar to ribosomal protein L17 GB:AAA34113.1 from (Nicotiana tabacum) | chr3:1167282-1168663 FORWARD | Aliases: T27C4.4, T27C4_4, EMB2171, EMBRYO DEFECTIVE 2171 |
2007-07-20 |
| 56806492 |
LjT56J20 |
AT2G20900.2 |
78435 |
84919 |
| Symbol: None | diacylglycerol kinase, putative, contains INTERPRO domain, IPR001206, DAG-kinase catalytic domain | chr2:8996693-9000013 REVERSE | Aliases: None |
2007-07-20 |
| 56806492 |
LjT56J20 |
AT4G03280.1 |
98627 |
100839 |
| Symbol: None | cytochrome B6-F complex iron-sulfur subunit, chloroplast / Rieske iron-sulfur protein / plastoquinol-plastocyanin reductase (petC), identical to gi:9843639; identical to cDNA rieske iron-sulfur protein precursor (petC) GI:5725449 | chr4:1440185-1441861 FORWARD | Aliases: F4C21.21, F4C21_21 |
2007-07-20 |
| 56806489 |
LjT36E22 |
AT1G25083.1 |
48507 |
50819 |
| Symbol: None | anthranilate synthase beta subunit, putative, strong similarity to anthranilate synthase beta subunit GI:403434 from (Arabidopsis thaliana); similar to ESTs dbj:AV540153.1, dbj:AV557490.1, gb:AI997696.1, gb:AW004516.1, dbj:AV521371.1 | chr1:8808661-8810430 REVERSE | Aliases: F5A9.7 |
2007-07-20 |
| 56806489 |
LjT36E22 |
AT1G24807.1 |
48507 |
50691 |
| Symbol: None | anthranilate synthase beta subunit, putative, similar to anthranilate synthase beta chain GI:403434; similar to ESTs dbj:AV540153.1, dbj:AV557490.1, gb:AI997696.1, gb:AW004516.1, dbj:AV521371.1 | chr1:8771753-8773522 REVERSE | Aliases: F5A9.17, F5A9_17 |
2007-07-20 |
| 56806489 |
LjT36E22 |
AT1G24909.1 |
48507 |
50819 |
| Symbol: None | anthranilate synthase beta subunit, putative, strong similarity to anthranilate synthase beta subunit GI:403434 from (Arabidopsis thaliana) | chr1:8785772-8787901 REVERSE | Aliases: F5A9.13 |
2007-07-20 |
| 56806489 |
LjT36E22 |
AT1G25155.1 |
48507 |
50819 |
| Symbol: None | anthranilate synthase beta subunit, putative, strong similarity to anthranilate synthase beta subunit GI:403434 from (Arabidopsis thaliana) | chr1:8822679-8824808 REVERSE | Aliases: F5A9.3 |
2007-07-20 |
| 56806485 |
LjT03L06 |
AT2G21790.1 |
56848 |
61298 |
| Symbol: R1 | ribonucleoside-diphosphate reductase small chain, putative / ribonucleotide reductase, putative, similar to ribonucleotide reductase GI:4151068 from (Nicotiana tabacum) | chr2:9300435-9304922 FORWARD | Aliases: R1, F7D8.11, F7D8_11 |
2007-07-20 |
| 56806485 |
LjT03L06 |
AT1G20580.1 |
85774 |
87264 |
| Symbol: None | small nuclear ribonucleoprotein, putative / snRNP, putative / Sm protein, putative, similar to small nuclear ribonucleoprotein Sm D3 (snRNP core protein D3, Sm-D3) (Mus musculus) SWISS-PROT:P43331 | chr1:7128878-7130631 FORWARD | Aliases: F5M15.9, F5M15_9 |
2007-07-20 |
| 56806485 |
LjT03L06 |
AT4G39390.1 |
90371 |
93253 |
| Symbol: None | transporter-related, low similarity to glucose-6-phosphate/phosphate-translocator precursor (Solanum tuberosum) GI:2997593 | chr4:18315569-18318037 FORWARD | Aliases: F23K16.20, F23K16_20 |
2007-07-20 |
| 56806485 |
LjT03L06 |
AT1G34020.1 |
90380 |
93269 |
| Symbol: None | transporter-related, low similarity to UDP-sugar transporter (Drosophila melanogaster) GI:14971008, UDP-glucuronic |