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BrGDB encompasses primary sequence data obtained from GenBank, including the most current gss and BAC assembly and annotation, EST and cDNA sequences, and protein sequences derived from the annotated genes. Brassica rapa genome assemblies refer to the pseudo-chromosome tiling of individual genomic sequence fragments obtained from the listed assembly sources. The mapping of cDNA and EST sequences onto the genome as well as interpretations of the overall data are based on our own spliced alignment results.

The maize genome assembly is still being refined and completed. BrGDB attempts to remain synchronized with the most recent release of the genome assembly and annotations.

For descriptions of the available downloads, go here.

NameLast modified dateFile Size
BRGDB154.sql.bz2Sep 13 200748.44 MB
BrGDBbac154.bz2Jul 19 20061.62 MB
BrGDBcdna154.bz2Jul 19 200694.58 KB
BrGDBest154.bz2Jul 19 20062.82 MB
BrGDBput154.bz2Jul 19 20061.85 MB

© 2006 Shannon D. Schlueter

AtGDB

PlantGDB

MaizeGDB

NSF Plant Genome Research

Brendel Group

Plant Sciences Institute

Iowa State University