Projects
AtGDB is being developed with genome-wide research applications in mind. There are many interesting questions that can now be approached from such genome-wide perspective. The spliced alignment data at the core of this database and the query capabilities inherent in the database design should facilitate such approaches. The links below refer to individual project pages. If you would like to contribute a project of your own, please contact us.
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BXZ03B - Supplementary data: a paper describing the GeneSeqer spliced alignment tool
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TBWB08PBB - Expression and evolution of the phosphoinositide-specific phospholipase C gene family in Arabidopsis thaliana
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ZB03NAR - Identification and analysis of U12-type introns in Arabidopsis
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ZSB03PP - Complete Arabidopsis EST mapping by spliced alignment of the ESTs onto the Arabidopsis genome (including description and discussion of the methods and results underlying AtGDB)
© 2006 Shannon D. Schlueter