Alternative splicing visualization tool... Enter DB Tools Tutorials Publications Methods Download Contacts

BLAST Tool

To search against Arabidopsis and rice introns/exons/exon junctions, paste your sequences here:

Sequence name (optional)	Program	E-value	Database	Filter
	blastn tblastn tblastx		Arabidopsis introns Arabiopsis exons Arabidopsis junction Rice introns Rice exons Rice Junction	On Off

Paste query sequence in raw or FASTA format or GenBank gi and accession number:

Or upload query sequence in FASTA format:

---

For general BLAST search against plant sequences, use the PlantGDB BLAST server

2. GeneSeqer (through PlantGDB)

For Arabidopsis: AtGDB GeneSeqer

For Rice: OsGDB GeneSeqer server

For general search, use the PlantGDB GeneSeqer server