| geneID | Txn | gi | AltS | note
|
|---|
| AT1G01100 | 431 | 8704377 | IntronR(1); ExonS(1); AltP(1); AltD(1) | structural constituent of ribosome::60S acidic ribosomal protein P1 (RPP1A), similar to 60S ACIDIC RIBOSOMAL PROTEIN P1 GB:O23095 from (Arabidopsis thaliana)
|
| AT1G01710 | 27 | 2708422 | IntronR(1); ExonS(1); AltD(1) | acyl-CoA thioesterase/ cyclic nucleotide binding::acyl-CoA thioesterase family protein, contains Pfam profiles: PF02551 acyl-CoA thioesterase, PF00027 cyclic nucleotide-binding domain
|
| AT1G01780 | 16 | 8690989 | ExonS(1) | zinc ion binding::LIM domain-containing protein, similar to PGPS/D1 (Petunia x hybrida) GI:4105772, LIM domain protein PLIM1 (Nicotiana tabacum) GI:5932418; contains Pfam profile PF00412: LIM domain
|
| AT1G01950 | 10 | 23303962 | ExonS(1) | ATP binding / microtubule motor::armadillo/beta-catenin repeat family protein / kinesin motor family protein, similar to kinesin-like protein GB:CAB41097 GI:5541717 from (Arabidopsis thaliana); contains Pfam profiles PF00225: Kinesin motor domain, PF00514: Armadillo/beta-catenin-like repeat
|
| AT1G02010 | 4 | 8721428 | AltA(1); AltP(1); ExonS(2); IntronR(2) | SEC1A; protein transporter::member of KEULE Gene Family
|
| AT1G02150 | 71 | 397215 | AltA(1); ExonS(1) | unknown protein::pentatricopeptide (PPR) repeat-containing protein, low similiarity to DNA-binding protein (Triticum aestivum) GI:6958202; contains Pfam profile: PF01535 PPR repeat
|
| AT1G02305 | 116 | 17300 | AltP(1); ExonS(2) | cysteine-type endopeptidase/ cysteine-type peptidase::cathepsin B-like cysteine protease, putative, similar to cathepsin B-like cysteine proteinase (Nicotiana rustica) GI:609175; contains Pfam profile PF00112: Papain family cysteine protease
|
| AT1G02860 | 32 | 2758207 | ExonS(1) | ubiquitin-protein ligase/ zinc ion binding::SPX (SYG1/Pho81/XPR1) domain-containing protein / zinc finger (C3HC4-type RING finger) protein-related, weak similarity to tripartite motif protein TRIM13 (Mus musculus) GI:12407427, gpStaf50 (Homo sapiens) GI:899300; contains Pfam profiles PF03105: SPX domain, PF00097: Zinc finger, C3HC4 type (RING finger)
|
| AT1G02920 | 53 | 7611516 | ExonS(2); AltP(1) | ATGSTF7 (GLUTATHIONE S-TRANSFERASE 11); glutathione transferase::Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002).
|
| AT1G03090 | 14 | 533706 | ExonS(1) | MCCA::MCCA is the biotinylated subunit of the dimer MCCase, which is involved in leucine degradation. Both subunits are nuclear coded and the active enzyme is located in the mitochondrion.
|
| AT1G03905 | 4 | 42471696 | ExonS(1); IntronR(2) | ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding::ABC transporter family protein, similar to NBD-like protein GB:AAD20643
|
| AT1G03960 | 11 | 19741955 | IntronR(1); ExonS(1) | calcium ion binding::calcium-binding EF hand family protein, contains Pfam profile: PF00036 EF hand
|
| AT1G04080 | 24 | 8695011 | ExonS(1) | unknown protein::hydroxyproline-rich glycoprotein family protein, Contains similarity to pre-mRNA processing protein PRP39 gb L29224 from S. cerevisiae. ESTs gb|R64908 and gb|T88158, gb|N38703 and gb|AA651043 come from this gene
|
| AT1G05320 | 10 | 398674 | ExonS(1) | unknown protein::similar to expressed protein [Arabidopsis thaliana] (TAIR:At2g32240.1); similar to unnamed protein product [Candida glabrata CBS138] (GB:CAG58365.1)
|
| AT1G05785 | 10 | 5839430 | AltA(1); ExonS(1) | unknown protein::Got1-like family protein, contains Pfam PF04178: Got1-like family profile; contains 4 transmembrane domains;
|
| AT1G05900 | 17 | 15294153 | ExonS(1); IntronR(1) | DNA binding / endonuclease DNA binding / endonuclease/ iron ion binding::endonuclease-related, similar to endonuclease III (Homo sapiens) GI:1753174; contains Pfam profile PF00633: Helix-hairpin-helix motif
|
| AT1G06090 | 8 | 8716999 | ExonS(1) | iron ion binding / oxidoreductase/ stearoyl-CoA 9-desaturase::fatty acid desaturase family protein, similar to delta 9 acyl-lipid desaturase GB:BAA25180 GI:2970034 (ADS1) from (Arabidopsis thaliana)
|
| AT1G06220 | 31 | 8689299 | ExonS(1) | GTP binding / translation elongation factor/ translation factor, nucleic acid binding::elongation factor Tu family protein, similar to Cryptosporidium parvum elongation factor-2 GB:U21667 GI:706974 from (Cryptosporidium parvum)
|
| AT1G06350 | 49 | 8733645 | ExonS(1) | iron ion binding / oxidoreductase/ stearoyl-CoA 9-desaturase::fatty acid desaturase family protein, similar to delta 9 acyl-lipid desaturase (ADS1) GI:2970034 from (Arabidopsis thaliana)
|
| AT1G06500 | 31 | 18253000 | IntronR(1); ExonS(1); AltD(1); AltA(1) | unknown protein::expressed protein
|
| AT1G06680 | 1165 | 315260 | AltA(1); AltP(1); ExonS(3) | PSBP (OXYGEN-EVOLVING ENHANCER PROTEIN 2); calcium ion binding::Encodes a 23 kD extrinsic protein that is part of photosystem II and participates in the regulation of oxygen evolution.
|
| AT1G06690 | 22 | 2763262 | ExonS(1) | aldo-keto reductase/ oxidoreductase::aldo/keto reductase family protein, contains Pfam profile PF00248: oxidoreductase, aldo/keto reductase family
|
| AT1G07170 | 21 | 2048201 | ExonS(1) | unknown protein::expressed protein, contains Pfam domain PF03660: Uncharacterised protein family (UPF0123)
|
| AT1G07350 | 55 | 19825417 | ExonS(1); IntronR(3) | RNA binding / nucleic acid binding::transformer serine/arginine-rich ribonucleoprotein, putative, similar to GB:Y09506 from (Nicotiana tabacum) (Plant Mol. Biol. 35 (3), 261-269 (1997))
|
| AT1G07780 | 30 | 8728495 | AltA(1); ExonS(1); IntronR(6) | PAI1 (PHOSPHORIBOSYLANTHRANILATE ISOMERASE 1); phosphoribosylanthranilate isomerase::Encodes phosphoribosylanthranilate isomerase which catalyzes the third step of the tryptophan biosynthetic pathway. Member of gene family.
|
| AT1G07890 | 901 | 16172 | IntronR(3); ExonS(2); AltP(1); AltD(1); AltA(1) | APX1; L-ascorbate peroxidase::Encodes a cytosolic ascorbate peroxidase. Ascorbate peroxidases scavenge hydrogen peroxide in the cytosol and chloroplasts of plants.
|
| AT1G07940 | 618 | 502067 | ExonS(1); IntronR(1) | calmodulin binding / translation elongation factor::elongation factor 1-alpha / EF-1-alpha, identical to GB:CAA34456 from (Arabidopsis thaliana) (Plant Mol. Biol. 14 (1), 107-110 (1990))
|
| AT1G07960 | 15 | 2758992 | IntronR(3); ExonS(1); AltA(1) | ATPDIL5-1; electron transporter/ thiol-disulfide exchange intermediate::Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily.
|
| AT1G08110 | 55 | 1327791 | ExonS(1); IntronR(2) | calmodulin binding / lactoylglutathione lyase::similar to lactoylglutathione lyase, putative / glyoxalase I, putative [Arabidopsis thaliana] (TAIR:At1g67280.1); similar to Glyoxalase I [Cicer arietinum] (GB:CAA12028.1); contains InterPro domain Glyoxalase I (InterPro:IPR004361); contains InterPro domain Glyoxalase/Bleomycin resistance protein/dioxygenase domain (InterPro:IPR004360)
|
| AT1G08820 | 12 | 49283516 | ExonS(1) | VAP27-2 (VAMP/SYNAPTOBREVIN-ASSOCIATED PROTEIN 27-2); structural molecule::Encodes VAP33-like protein that interacts with cowpea mosaic virus protein 60K. Is a SNARE-like protein that may be involved in vesicular transport to or from the ER.
|
| geneID | Txn | gi | AltS | note
|
|---|
