| geneID | Txn | gi | AltS | note
|
|---|
| AT1G01020 | 6 | 9779319 | AltD(1); IntronR(1) | ARV1::similar to transmembrane ARV1-like family protein [Arabidopsis thaliana] (TAIR:At4g01510.1); similar to hypothetical protein DDB0188786 [Dictyostelium discoideum] (GB:EAL62332.1); contains InterPro domain Arv1-like protein (InterPro:IPR007290)
|
| AT1G01060 | 42 | 3281845 | AltA(1); IntronR(1) | LHY (LATE ELONGATED HYPOCOTYL); DNA binding LHY (LATE ELONGATED HYPOCOTYL); DNA binding / transcription factor::myb-related putative transcription factor involved in circadian rhythm along with another myb transcription factor CCA1
|
| AT1G01070 | 7 | 21407813 | IntronR(1) | unknown protein::nodulin MtN21 family protein, similar to MtN21 GI:2598575 (root nodule development) from (Medicago truncatula)
|
| AT1G01100 | 419 | 2759962 | IntronR(1); AltD(1) | structural constituent of ribosome::60S acidic ribosomal protein P1 (RPP1A), similar to 60S ACIDIC RIBOSOMAL PROTEIN P1 GB:O23095 from (Arabidopsis thaliana)
|
| AT1G01160 | 35 | 899200 | IntronR(2) | GIF2 (GRF1-INTERACTING FACTOR 2)::Arabidopsis thaliana GRF1-interacting factor 2 (GIF2) mRNA
|
| AT1G01210 | 10 | 19798071 | IntronR(1) | DNA binding / DNA-directed RNA polymerase/ transcription factor::DNA-directed RNA polymerase III family protein, similar to SP|O13896 DNA-directed RNA polymerases III 12.5 kDa polypeptide (EC 2.7.7.6) {Schizosaccharomyces pombe}; contains Pfam profiles PF02150: RNA polymerases M/15 Kd subunit, PF01096: Transcription factor S-II (TFIIS)
|
| AT1G01240 | 21 | 15810264 | IntronR(2); AltD(1) | unknown protein::expressed protein
|
| AT1G01450 | 9 | 5566607 | AltA(1); AltD(1); IntronR(2) | ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase::protein kinase-related, contains eukaryotic protein kinase domain, INTERPRO:IPR000719
|
| AT1G01470 | 55 | 587037 | IntronR(1) | LEA14 (LATE EMBRYOGENESIS ABUNDANT 14)::Encodes late-embryogenesis abundant protein whose mRNA levels are induced in response to wounding and light stress. Might be involved in protection against dessication.
|
| AT1G01490 | 26 | 930970 | IntronR(2) | metal ion binding::similar to heavy-metal-associated domain-containing protein [Arabidopsis thaliana] (TAIR:At5g23760.1); similar to unknown [Populus tremuloides] (GB:AAO63778.1); contains InterPro domain Heavy metal transport/detoxification protein (InterPro:IPR006121)
|
| AT1G01540 | 30 | 16700 | IntronR(1) | ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase::protein kinase family protein, contains protein kinase domain, Pfam:PF00069; contains serine/threonine protein kinase domain, INTERPRO:IPR002290
|
| AT1G01620 | 476 | 16918 | IntronR(1) | PIP1C; water channel::a member of the plasma membrane intrinsic protein subfamily PIP1. localizes to the plasma membrane and exhibits water transport activity in Xenopus oocyte. expressed ubiquitously and protein level decreases slightly during leaf development.
|
| AT1G01650 | 13 | 19838768 | IntronR(1) | D-alanyl-D-alanine endopeptidase/ peptidase::similar to protease-associated (PA) domain-containing protein [Arabidopsis thaliana] (TAIR:At1g63690.1); similar to protease-associated (PA) domain-containing protein [Arabidopsis thaliana] (TAIR:At1g63690.2); similar to putative growth-on protein GRO10 [Oryza sativa (japonica cultivar-group)] (GB:XP_468462.1); similar to growth-on protein GRO10 [Euphorbia esula] (GB:AAL14629.1); similar to putative growth-on protein GRO10 [Oryza sativa (japonica cultivar-group)] (GB:BAD62487.1); contains InterPro domain Protease-associated PA (InterPro:IPR003137); contains InterPro domain Presenilin signal peptide peptidase (InterPro:IPR006639); contains InterPro domain Membrane protein of unknown function DUF435 (InterPro:IPR007369)
|
| AT1G01710 | 27 | 2708422 | IntronR(1); ExonS(1) | acyl-CoA thioesterase/ cyclic nucleotide binding::acyl-CoA thioesterase family protein, contains Pfam profiles: PF02551 acyl-CoA thioesterase, PF00027 cyclic nucleotide-binding domain
|
| AT1G01720 | 55 | 398603 | IntronR(1) | ATAF1; transcription factor::belongs to a large family of putative transcriptional activators with NAC domain. Transcript level increases in response to wounding.
|
| AT1G01770 | 20 | 2596193 | IntronR(2) | unknown protein::expressed protein
|
| AT1G01820 | 46 | 895728 | IntronR(3) | unknown protein::peroxisomal biogenesis factor 11 family protein / PEX11 family protein, contains Pfam PF05648: Peroxisomal biogenesis factor 11 (PEX11)
|
| AT1G01860 | 19 | 3005589 | IntronR(2) | PFC1 (PALEFACE 1)::dimethyladenosine transferase
|
| AT1G01910 | 44 | 8677554 | AltA(1); IntronR(2) | ATP binding::anion-transporting ATPase, putative, similar to SP|O43681 Arsenical pump-driving ATPase (EC 3.6.3.16) (Arsenite-translocating ATPase) (Arsenical resistance ATPase) (Arsenite-transporting ATPase) (ARSA) (ASNA-I) {Homo sapiens}; contains Pfam profile PF02374: Anion-transporting ATPase
|
| AT1G01920 | 17 | 8729627 | IntronR(1) | unknown protein::similar to ribulose-1,5 bisphosphate carboxylase oxygenase large subunit N-methyltransferase, putative [Arabidopsis thaliana] (TAIR:At1g14030.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:NP_910361.1); contains InterPro domain Nuclear protein SET (InterPro:IPR001214)
|
| AT1G02010 | 4 | 8721428 | IntronR(1); ExonS(1); AltA(1) | SEC1A; protein transporter::member of KEULE Gene Family
|
| AT1G02020 | 11 | 8732878 | IntronR(2) | oxidoreductase/ oxidoreductase, acting on NADH or NADPH, nitrogenous group as acceptor::nitroreductase family protein, contains Pfam PF00881: nitroreductase family protein profile; contains Prosite PS00343: Gram-positive cocci surface proteins 'anchoring' hexapeptide
|
| AT1G02065 | 10 | 5931680 | IntronR(1) | SPL8 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 8); DNA binding::Encodes an SBP-box gene, a member of the SPL gene family. Mutants are affected in micro- and megasporogenesis, trichome formation on sepals, and stamen filament elongation.
|
| AT1G02070 | 35 | 21404384 | IntronR(1) | unknown protein::expressed protein
|
| AT1G02100 | 19 | 18377693 | IntronR(1) | methyltransferase::leucine carboxyl methyltransferase family protein, contains Pfam PF04072: Leucine carboxyl methyltransferase domain; similar to Leucine carboxyl methyltransferase (Protein-leucine O- methyltransferase) (CGI-68) (SP:Q9UIC8) {Homo sapiens}
|
| AT1G02160 | 43 | 2722481 | IntronR(1) | unknown protein::expressed protein
|
| AT1G02220 | 5 | 42470484 | IntronR(2) | ANAC003; transcription factor::no apical meristem (NAM) family protein, similar to NAC domain protein NAC2 (GI:15148914) {Phaseolus vulgaris}; similar to NAC domain protein NAC2 (GI:21554255) {Arabidopsis thaliana}; contains Pfam PF02365 : No apical meristem (NAM) protein
|
| AT1G02560 | 81 | 458836 | IntronR(3) | CLPP5 (NUCLEAR ENCODED CLP PROTEASE 1); endopeptidase Clp::One of several nuclear-encoded ClpPs (caseinolytic protease). Contains a highly conserved catalytic triad of Ser-type proteases (Ser-His-Asp). The name reflects nomenclature described in Adam et. al (2001).
|
| AT1G02630 | 4 | 28207663 | IntronR(1) | nucleoside transporter unknown protein::similar to equilibrative nucleoside transporter family protein [Arabidopsis thaliana] (TAIR:At1g70330.1); similar to putative equilibrative nucleoside transporter ENT8 splice variant [Oryza sativa (japonica cultivar-group)] (GB:XP_480602.1); contains InterPro domain Delayed-early response protein/equilibrative nucleoside transporter (InterPro:IPR002259)
|
| AT1G02880 | 20 | 5846151 | AltA(1); IntronR(1) | ATP binding / thiamin diphosphokinase::thiamin pyrophosphokinase, putative, similar to thiamin pyrophosphokinase (Mus musculus) gi|6468206|dbj|BAA87040
|
| geneID | Txn | gi | AltS | note
|
|---|
