| geneID | Txn | gi | AltS | note
|
|---|
| AT1G01710 | 27 | 2708422 | IntronR(1); ExonS(1) | acyl-CoA thioesterase/ cyclic nucleotide binding::acyl-CoA thioesterase family protein, contains Pfam profiles: PF02551 acyl-CoA thioesterase, PF00027 cyclic nucleotide-binding domain
|
| AT1G02010 | 4 | 8721428 | IntronR(1); ExonS(1); AltA(1) | SEC1A; protein transporter::member of KEULE Gene Family
|
| AT1G02150 | 69 | 397215 | AltA(1); ExonS(1) | unknown protein::pentatricopeptide (PPR) repeat-containing protein, low similiarity to DNA-binding protein (Triticum aestivum) GI:6958202; contains Pfam profile: PF01535 PPR repeat
|
| AT1G03090 | 16 | 533706 | ExonS(1) | MCCA::MCCA is the biotinylated subunit of the dimer MCCase, which is involved in leucine degradation. Both subunits are nuclear coded and the active enzyme is located in the mitochondrion.
|
| AT1G03905 | 4 | 42471696 | IntronR(2); ExonS(1) | ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding::ABC transporter family protein, similar to NBD-like protein GB:AAD20643
|
| AT1G03960 | 11 | 19741955 | ExonS(1); IntronR(1) | calcium ion binding::calcium-binding EF hand family protein, contains Pfam profile: PF00036 EF hand
|
| AT1G04080 | 23 | 8695011 | ExonS(1) | unknown protein::hydroxyproline-rich glycoprotein family protein, Contains similarity to pre-mRNA processing protein PRP39 gb L29224 from S. cerevisiae. ESTs gb|R64908 and gb|T88158, gb|N38703 and gb|AA651043 come from this gene
|
| AT1G05320 | 7 | 8733575 | ExonS(1) | unknown protein::similar to expressed protein [Arabidopsis thaliana] (TAIR:At2g32240.1); similar to unnamed protein product [Candida glabrata CBS138] (GB:CAG58365.1)
|
| AT1G05785 | 9 | 5839430 | AltA(1); ExonS(1) | unknown protein::Got1-like family protein, contains Pfam PF04178: Got1-like family profile; contains 4 transmembrane domains;
|
| AT1G05900 | 17 | 15294153 | ExonS(1); IntronR(1) | DNA binding / endonuclease DNA binding / endonuclease/ iron ion binding::endonuclease-related, similar to endonuclease III (Homo sapiens) GI:1753174; contains Pfam profile PF00633: Helix-hairpin-helix motif
|
| AT1G06220 | 31 | 7610215 | ExonS(1) | GTP binding / translation elongation factor/ translation factor, nucleic acid binding::elongation factor Tu family protein, similar to Cryptosporidium parvum elongation factor-2 GB:U21667 GI:706974 from (Cryptosporidium parvum)
|
| AT1G06350 | 49 | 8733645 | ExonS(1) | iron ion binding / oxidoreductase/ stearoyl-CoA 9-desaturase::fatty acid desaturase family protein, similar to delta 9 acyl-lipid desaturase (ADS1) GI:2970034 from (Arabidopsis thaliana)
|
| AT1G06500 | 31 | 7611466 | IntronR(1); ExonS(1); AltD(1); AltA(1) | unknown protein::expressed protein
|
| AT1G07170 | 20 | 5840868 | ExonS(1) | unknown protein::expressed protein, contains Pfam domain PF03660: Uncharacterised protein family (UPF0123)
|
| AT1G07350 | 51 | 315641 | ExonS(1); IntronR(3) | RNA binding / nucleic acid binding::transformer serine/arginine-rich ribonucleoprotein, putative, similar to GB:Y09506 from (Nicotiana tabacum) (Plant Mol. Biol. 35 (3), 261-269 (1997))
|
| AT1G07780 | 30 | 5851319 | IntronR(5); ExonS(1) | PAI1 (PHOSPHORIBOSYLANTHRANILATE ISOMERASE 1); phosphoribosylanthranilate isomerase::Encodes phosphoribosylanthranilate isomerase which catalyzes the third step of the tryptophan biosynthetic pathway. Member of gene family.
|
| AT1G07890 | 854 | 16172 | IntronR(2); ExonS(1); AltD(1); AltA(1) | APX1; L-ascorbate peroxidase::Encodes a cytosolic ascorbate peroxidase. Ascorbate peroxidases scavenge hydrogen peroxide in the cytosol and chloroplasts of plants.
|
| AT1G07940 | 589 | 16665 | ExonS(1) | calmodulin binding / translation elongation factor::elongation factor 1-alpha / EF-1-alpha, identical to GB:CAA34456 from (Arabidopsis thaliana) (Plant Mol. Biol. 14 (1), 107-110 (1990))
|
| AT1G07960 | 13 | 19798265 | AltA(1); ExonS(1); IntronR(3) | ATPDIL5-1; electron transporter/ thiol-disulfide exchange intermediate::Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily.
|
| AT1G08110 | 53 | 7611387 | ExonS(1); IntronR(2) | calmodulin binding / lactoylglutathione lyase::similar to lactoylglutathione lyase, putative / glyoxalase I, putative [Arabidopsis thaliana] (TAIR:At1g67280.1); similar to Glyoxalase I [Cicer arietinum] (GB:CAA12028.1); contains InterPro domain Glyoxalase I (InterPro:IPR004361); contains InterPro domain Glyoxalase/Bleomycin resistance protein/dioxygenase domain (InterPro:IPR004360)
|
| AT1G08820 | 12 | 18377966 | ExonS(1) | VAP27-2 (VAMP/SYNAPTOBREVIN-ASSOCIATED PROTEIN 27-2); structural molecule::Encodes VAP33-like protein that interacts with cowpea mosaic virus protein 60K. Is a SNARE-like protein that may be involved in vesicular transport to or from the ER.
|
| AT1G09932 | 13 | 19878910 | AltD(1); ExonS(2); IntronR(3) | catalytic::phosphoglycerate/bisphosphoglycerate mutase-related, weak hit to Pfam profile PF00300: phosphoglycerate mutase family
|
| AT1G10095 | 4 | 52354112 | IntronR(2); ExonS(1); AltP(1) | protein prenyltransferase::similar to farnesyltransferase alpha subunit, putative / FTA, putative / protein farnesyltransferase, putative [Arabidopsis thaliana] (TAIR:At3g59380.1); similar to P0445E10.13 [Oryza sativa (japonica cultivar-group)] (GB:NP_916962.1); contains InterPro domain Protein prenyltransferase, alpha subunit (InterPro:IPR002088)
|
| AT1G10290 | 41 | 5841235 | ExonS(1) | ADL6 (DYNAMIN-LIKE PROTEIN 6)::involved in trafficking from the trans-Golgi Network to the central vacuole.
|
| AT1G10600 | 7 | 46931319 | AltA(1); ExonS(2) | unknown protein::similar to mov34 family protein [Arabidopsis thaliana] (TAIR:At1g48790.1); similar to STAM binding protein-like protein [Oryza sativa (japonica cultivar-group)] (GB:BAD73720.1); contains InterPro domain Mov34 family, subtype 1 (InterPro:IPR003639); contains InterPro domain Mov34 family (InterPro:IPR000555)
|
| AT1G11190 | 44 | 8733653 | ExonS(1); IntronR(3) | BFN1 (BIFUNCTIONAL NUCLEASE I); nucleic acid binding::bifunctional nuclease that acts on both RNA and DNA involved in nucleic acid degradation to facilitate nucleotide and phosphate recovery during senescence
|
| AT1G12790 | 4 | 21407198 | ExonS(1) | unknown protein::expressed protein
|
| AT1G13450 | 31 | 598072 | ExonS(1); IntronR(1) | transcription factor unknown protein::similar to DNA-binding protein GT-1-related [Arabidopsis thaliana] (TAIR:At3g25990.1); similar to DNA-binding protein [Nicotiana tabacum] (GB:AAA34085.1); similar to DNA-binding protein B2F - common tobacco (fragment) (GB:PQ0446); contains InterPro domain Myb DNA-binding domain (InterPro:IPR001005)
|
| AT1G14820 | 17 | 19878275 | AltA(1); ExonS(1); IntronR(4) | transporter::SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein, contains Pfam PF00650 : CRAL/TRIO domain; similar to phosphatidylinositol/phosphatidylcholine transfer protein SP:P24280 (Saccharomyces cerevisiae (Baker's yeast))
|
| AT1G15690 | 426 | 16590 | ExonS(2) | AVP1; ATPase::encodes a H(+)-translocating (pyrophosphate-energized) inorganic pyrophosphatase (H(+)-PPase; EC 3.6.1.1) located in the vacuolar membrane. Expression is found in all tissues examined, particularly enhanced in pollen, and is repressed by light.
|
| geneID | Txn | gi | AltS | note
|
|---|
