| geneID | Txn | gi | AltS | note
|
|---|
| AT1G01020 | 6 | 9779319 | AltD(1); IntronR(1) | ARV1::similar to transmembrane ARV1-like family protein [Arabidopsis thaliana] (TAIR:At4g01510.1); similar to hypothetical protein DDB0188786 [Dictyostelium discoideum] (GB:EAL62332.1); contains InterPro domain Arv1-like protein (InterPro:IPR007290)
|
| AT1G01100 | 419 | 2759962 | IntronR(1); AltD(1) | structural constituent of ribosome::60S acidic ribosomal protein P1 (RPP1A), similar to 60S ACIDIC RIBOSOMAL PROTEIN P1 GB:O23095 from (Arabidopsis thaliana)
|
| AT1G01140 | 47 | 5844062 | AltD(2) | CIPK9 (CBL-INTERACTING PROTEIN KINASE 9); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase::Encodes a CBL-interacting protein kinase with similarity to SOS2
|
| AT1G01240 | 21 | 15810264 | IntronR(2); AltD(1) | unknown protein::expressed protein
|
| AT1G01450 | 9 | 5566607 | AltA(1); AltD(1); IntronR(2) | ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase::protein kinase-related, contains eukaryotic protein kinase domain, INTERPRO:IPR000719
|
| AT1G03160 | 12 | 8682166 | AltD(1) | unknown protein::expressed protein, similar to hypothetical protein DDB0187425 [Dictyostelium discoideum] (GB:EAL63733.1)
|
| AT1G03310 | 13 | 5841538 | AltD(1) | ATISA2/DBE1/ISA2; alpha-amylase ATISA2/DBE1/ISA2; alpha-amylase/ isoamylase::Encodes a protein with strong similarity to isoamylase (EC:3.2.1.68) however lacks critical residues known to be important for activity. Appears to co localize with ISA1 in the chloroplast isoamylase complex.
|
| AT1G04140 | 64 | 460752 | AltD(1) | nucleotide binding::transducin family protein / WD-40 repeat family protein, contains 4 WD-40 repeats (PF00400); similar to neural cell adhesion molecule 2, large isoform precursor gb|M76710 from Xenopus laevis, and beta transducin from S. cerevisiae gb|Q05946. ESTs gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101, gb|H36304, and gb|N65606 come from
|
| AT1G04170 | 67 | 5843175 | AltA(1); AltD(1) | EIF2 GAMMA; translation factor, nucleic acid binding::AF353097 Arabidopsis thaliana protein synthesis initiation factor eIF2 gamma mRNA, complete cds
|
| AT1G04750 | 80 | 4090883 | AltD(1) | VAMP7B (VESICLE-ASSOCIATED MEMBRANE PROTEIN 7B)::vesicle-associated membrane protein 7B (At VAMP7B) mRNA,
|
| AT1G04950 | 47 | 2196465 | IntronR(2); AltD(1) | TAFII59; DNA binding / transcription initiation factor::AF344877 Arabidopsis thaliana putative TBP-associated 59 kDa subunit protein (TAFII59) mRNA, complete cds
|
| AT1G05400 | 4 | 52354104 | IntronR(2); AltD(1) | unknown protein::expressed protein, contains Pfam profile PF04396: Protein of unknown function, DUF537
|
| AT1G05520 | 11 | 496764 | AltD(1) | protein binding / transporter::transport protein, putative, similar to Swiss-Prot:Q15436 protein transport protein Sec23A (Homo sapiens)
|
| AT1G05550 | 7 | 86004236 | AltD(1) | unknown protein::expressed protein, contains Pfam profile PF03478: Protein of unknown function (DUF295)
|
| AT1G06360 | 16 | 2413837 | IntronR(5); AltD(1) | iron ion binding / oxidoreductase/ stearoyl-CoA 9-desaturase::fatty acid desaturase family protein, similar to delta 9 acyl-lipid desaturase (ADS1) GI:2970034 from (Arabidopsis thaliana)
|
| AT1G06500 | 31 | 7611466 | IntronR(1); ExonS(1); AltD(1); AltA(1) | unknown protein::expressed protein
|
| AT1G06570 | 103 | 2145038 | AltD(1) | PDS1 (PHYTOENE DESATURATION 1)::Mutation of the PDS1 locus disrupts the activity of p-hydroxyphenylpyruvate dioxygenase (HPPDase), the first committed step in the synthesis of both plastoquinone and tocopherols in plants.
|
| AT1G06700 | 39 | 5844988 | AltD(1) | ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase::serine/threonine protein kinase, putative, similar to Pto kinase interactor 1 (Pti1)(Lycopersicon esculentum) gi|3668069|gb|AAC61805
|
| AT1G06960 | 14 | 5839380 | IntronR(2); AltD(1); AltA(1) | RNA binding / nucleic acid binding::small nuclear ribonucleoprotein U2B, putative / spliceosomal protein, putative, non-consensus splice donor GC at exon 4; similar to spliceosomal protein (U2B) GI:169588 from (Solanum tuberosum)
|
| AT1G07640 | 23 | 5059393 | AltD(1) | OBP2; DNA binding OBP2; DNA binding / transcription factor::Identified as a homolog of OBP1. Contains a Dof DNA binding domain. Expression is highest in leaves and roots.
|
| AT1G07745 | 8 | 15810228 | AltD(2); IntronR(3) | ATRAD51D/RAD51D; ATP binding / DNA binding::DNA repair family protein, contains similarity to Swiss-Prot:O75771 DNA repair protein RAD51 homolog 4 (R51H3) (TRAD) (Homo sapiens)
|
| AT1G07840 | 43 | 8730499 | IntronR(1); AltD(1) | unknown protein::leucine zipper factor-related, similar to charged amino acid rich leucine zipper factor-1 (GI:12061569) {Mus musculus}
|
| AT1G07890 | 854 | 16172 | IntronR(2); ExonS(1); AltD(1); AltA(1) | APX1; L-ascorbate peroxidase::Encodes a cytosolic ascorbate peroxidase. Ascorbate peroxidases scavenge hydrogen peroxide in the cytosol and chloroplasts of plants.
|
| AT1G08040 | 15 | 17611 | AltD(1) | unknown protein::expressed protein, contains Pfam profile PF05212: Protein of unknown function (DUF707)
|
| AT1G08125 | 12 | 19799739 | AltD(1) | unknown protein::Expressed protein
|
| AT1G08400 | 6 | 10423471 | AltD(1) | unknown protein::chromosome structural maintenance protein-related, contains weak similarity to RAD50-interacting protein 1 (Homo sapiens) gi|11967435|gb|AAG42101
|
| AT1G08570 | 44 | 940462 | IntronR(3); AltD(1) | electron transporter/ thiol-disulfide exchange intermediate::thioredoxin family protein, contains Pfam profile: PF00085 Thioredoxin; similar to ESTs gb|T46281, gb|R83933, gb|N65879, emb|F14466, gb|N96726, gb|AA042340, and emb|Z18150
|
| AT1G08630 | 56 | 5841498 | AltA(1); AltD(1) | aldehyde-lyase::L-allo-threonine aldolase-related, similar to L-allo-threonine aldolase (EC 4.1.2.-) (L-allo-TA) (L-allo-threonine acetaldehyde-lyase) (SP:O07051) {Aeromonas jandaei}; similar to ESTs gb|R30517, gb|T42772, gb|R90493, and gb|R90493
|
| AT1G08750 | 15 | 5844927 | IntronR(2); AltD(1); AltA(1) | GPI-anchor transamidase/ cysteine-type endopeptidase/ legumain::GPI-anchor transamidase, putative, similar to SP|P49018 GPI-anchor transamidase (EC 3.-.-.-) (GPI transamidase) {Saccharomyces cerevisiae}; contains Pfam profile PF01650: Peptidase C13 family
|
| AT1G08970 | 47 | 5842512 | AltD(1); IntronR(1) | HAP5C (HEME ACTIVATED PROTEIN 5C); DNA binding HAP5C (HEME ACTIVATED PROTEIN 5C); DNA binding / transcription factor::heme activated protein (HAP5c) mRNA, complete cds
|
| geneID | Txn | gi | AltS | note
|
|---|
