| geneID | Txn | gi | AltS | note
|
|---|
| AT1G01060 | 42 | 3281845 | AltA(1); IntronR(1) | LHY (LATE ELONGATED HYPOCOTYL); DNA binding LHY (LATE ELONGATED HYPOCOTYL); DNA binding / transcription factor::myb-related putative transcription factor involved in circadian rhythm along with another myb transcription factor CCA1
|
| AT1G01170 | 24 | 5842624 | AltA(1) | unknown protein::similar to stress-related ozone-induced protein (OZI1) / stress-related ozone-responsive protein [Arabidopsis thaliana] (TAIR:At4g00860.1); similar to ozone-responsive stress-related protein-like [Oryza sativa (japonica cultivar-group)] (GB:NP_910318.1)
|
| AT1G01450 | 9 | 5566607 | AltA(1); AltD(1); IntronR(2) | ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase::protein kinase-related, contains eukaryotic protein kinase domain, INTERPRO:IPR000719
|
| AT1G01910 | 44 | 8677554 | AltA(1); IntronR(2) | ATP binding::anion-transporting ATPase, putative, similar to SP|O43681 Arsenical pump-driving ATPase (EC 3.6.3.16) (Arsenite-translocating ATPase) (Arsenical resistance ATPase) (Arsenite-transporting ATPase) (ARSA) (ASNA-I) {Homo sapiens}; contains Pfam profile PF02374: Anion-transporting ATPase
|
| AT1G02010 | 4 | 8721428 | IntronR(1); ExonS(1); AltA(1) | SEC1A; protein transporter::member of KEULE Gene Family
|
| AT1G02090 | 32 | 3288822 | AltA(1) | FUS5 (FUSCA 5); MAP kinase kinase::encodes a phosphoprotein that is a subunit of the COP9 signalosome. Mutants exhibit constitutive photomorphogenic phenotype.
|
| AT1G02150 | 69 | 397215 | AltA(1); ExonS(1) | unknown protein::pentatricopeptide (PPR) repeat-containing protein, low similiarity to DNA-binding protein (Triticum aestivum) GI:6958202; contains Pfam profile: PF01535 PPR repeat
|
| AT1G02190 | 12 | 396603 | AltA(1) | catalytic::CER1 protein, putative, similar to CER1 GI:1199467 and maize gl1 homolog (glossy1 locus) GI:1209703 from (Arabidopsis thaliana)
|
| AT1G02280 | 42 | 397246 | AltA(1) | TOC33 (PLASTID PROTEIN IMPORT 1); GTP binding::Encodes a GTP-binding GTP-ase. Component of the chloroplast protein import machinery. Required for import of POR B into plastids.
|
| AT1G02470 | 16 | 21405679 | AltA(1) | unknown protein::expressed protein, contains non-consensus splice sites;
|
| AT1G02500 | 248 | 16684 | AltA(1) | SAM1; methionine adenosyltransferase::S-adenosylmethionine synthetase gene sam-1
|
| AT1G02840 | 111 | 166843 | AltA(2) | SR1; RNA binding / nucleic acid binding::SR1 is a plant homologue of the human general/alternative splicing factor SF2/ASF.
|
| AT1G02850 | 37 | 315400 | AltA(2) | hydrolase, hydrolyzing O-glycosyl compounds::glycosyl hydrolase family 1 protein, contains Pfam PF00232 : Glycosyl hydrolase family 1 domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase; similar to hydroxyisourate hydrolase (GI:19569603) (Glycine max)
|
| AT1G02880 | 20 | 5846151 | AltA(1); IntronR(1) | ATP binding / thiamin diphosphokinase::thiamin pyrophosphokinase, putative, similar to thiamin pyrophosphokinase (Mus musculus) gi|6468206|dbj|BAA87040
|
| AT1G02910 | 4 | 32885643 | AltA(1) | unknown protein::tetratricopeptide repeat (TPR)-containing protein, contains Pfam profile PF00515: TPR Domain
|
| AT1G02950 | 13 | 5842834 | AltA(1) | ATGSTF4 (GLUTATHIONE S-TRANSFERASE 31); glutathione transferase::Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002).
|
| AT1G02960 | 17 | 19879002 | IntronR(1); AltA(1) | unknown protein::expressed protein
|
| AT1G03110 | 12 | 13877930 | AltA(1) | nucleotide binding::transducin family protein / WD-40 repeat family protein, contains 4 WD-40 repeats (PF00400); similar to WD-repeat domain 4 protein (GI:9955698) (Mus musculus)
|
| AT1G03457 | 16 | 19797291 | AltA(1) | RNA binding / nucleic acid binding::RNA-binding protein, putative, similar to Etr-1 (Danio rerio) GI:7670536, BRUNO-like 6 RNA-binding protein (Homo sapiens) GI:15341327; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM)
|
| AT1G03630 | 80 | 5844734 | AltA(1); IntronR(1) | POR (PROTOCHLOROPHYLLIDE OXIDOREDUCTASE); oxidoreductase/ protochlorophyllide reductase::mRNA for NADPH:protochlorophyllide oxidoreductase, complete
|
| AT1G03840 | 7 | 19741164 | AltA(1) | nucleic acid binding / transcription factor/ zinc ion binding nucleic acid binding / zinc ion binding::zinc finger (C2H2 type) family protein, contains Zinc finger,C2H2 type,domain contains Pfam domain, PF00096: Zinc finger, C2H2 type
|
| AT1G03900 | 62 | 8691065 | AltA(1) | ATNAP4::member of NAP family, an heterogeneous subfamily of the ATP-binding Cassette (ABC) superfamily of membrane transporters. The NAPs proteins are characterized by having only one nucleotide-binding folds (NBFs) domain.
|
| AT1G04170 | 67 | 5843175 | AltA(1); AltD(1) | EIF2 GAMMA; translation factor, nucleic acid binding::AF353097 Arabidopsis thaliana protein synthesis initiation factor eIF2 gamma mRNA, complete cds
|
| AT1G04400 | 82 | 397228 | AltA(1) | CRY2 (CRYPTOCHROME 2)::Blue light receptor mediating blue-light regulated cotyledon expansion and flowering time. Positive regulator of the flowering-time gene CONSTANS. This gene possesses a light-induced CNT2 N-terminal homodimerisation domain.
|
| AT1G04620 | 16 | 5846109 | AltA(1) | coenzyme F420 hydrogenase::coenzyme F420 hydrogenase family / dehydrogenase, beta subunit family, contains Pfam PF04432: Coenzyme F420 hydrogenase/dehydrogenase, beta domain; similar to Coenzyme F420 hydrogenase beta subunit (SP:Q00391) {Methanobacterium thermoautotrophicum}
|
| AT1G04670 | 17 | 55978672 | AltA(1) | unknown protein::expressed protein, ; expression supported by MPSS
|
| AT1G04830 | 14 | 8696997 | AltA(1); IntronR(1) | unknown protein::RabGAP/TBC domain-containing protein, low similarity to SP|Q08484 GTPase-activating protein GYP1 {Saccharomyces cerevisiae}; contains Pfam profile PF00566: TBC domain
|
| AT1G04870 | 30 | 460759 | AltA(1) | S-adenosylmethionine-dependent methyltransferase/ methyltransferase methyltransferase::protein arginine N-methyltransferase family protein, similar to SP|Q96LA8 Protein arginine N-methyltransferase 6 (EC 2.1.1.-) {Homo sapiens}
|
| AT1G05170 | 16 | 498657 | AltA(1) | transferase, transferring glycosyl groups / transferase, transferring hexosyl groups::galactosyltransferase family protein
|
| AT1G05180 | 34 | 304103 | AltA(1); IntronR(1) | AXR1 (AUXIN RESISTANT 1); ubiquitin-like activating enzyme::Similar to the ubiquitin-activating enzyme E1. Involved in auxin action.
|
| geneID | Txn | gi | AltS | note
|
|---|
